RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SLC52A1Q9NWF4 448 aa15.86■□□□□ 0.13
NUP98-205ENST00000397007 IDI1Q13907 227 aa15.84■□□□□ 0.13
NUP98-205ENST00000397007 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
NUP98-205ENST00000397007 ADGRB1O14514 1584 aa15.83■□□□□ 0.13
NUP98-205ENST00000397007 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
NUP98-205ENST00000397007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.121e-8■■■■□ 20.3
NUP98-205ENST00000397007 PIK3C2GO75747 1445 aa15.82■□□□□ 0.12
NUP98-205ENST00000397007 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
NUP98-205ENST00000397007 SCAF11Q99590 1463 aaKnown RBP15.81■□□□□ 0.12
NUP98-205ENST00000397007 CCDC144AA2RUR9 1427 aa15.81■□□□□ 0.12
NUP98-205ENST00000397007 LTBP4Q8N2S1 1624 aa15.8■□□□□ 0.12
NUP98-205ENST00000397007 ADAMTS13Q76LX8 1427 aa15.8■□□□□ 0.12
NUP98-205ENST00000397007 ALKQ9UM73 1620 aa15.79■□□□□ 0.12
NUP98-205ENST00000397007 FOXD1Q16676 465 aa15.78■□□□□ 0.12
NUP98-205ENST00000397007 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.12
NUP98-205ENST00000397007 ARHGEF28Q8N1W1 1705 aaKnown RBP15.77■□□□□ 0.12
NUP98-205ENST00000397007 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.11
NUP98-205ENST00000397007 RIMS2Q9UQ26 1411 aa15.77■□□□□ 0.11
NUP98-205ENST00000397007 CPS1P31327 1500 aa15.76■□□□□ 0.11
NUP98-205ENST00000397007 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
NUP98-205ENST00000397007 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
NUP98-205ENST00000397007 TECPR2O15040 1411 aa15.71■□□□□ 0.11
NUP98-205ENST00000397007 DLC1Q96QB1 1528 aa15.71■□□□□ 0.11
NUP98-205ENST00000397007 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
NUP98-205ENST00000397007 LTKP29376 864 aa15.7■□□□□ 0.1
NUP98-205ENST00000397007 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
NUP98-205ENST00000397007 ADGRB2O60241 1585 aa15.69■□□□□ 0.1
NUP98-205ENST00000397007 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
NUP98-205ENST00000397007 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
NUP98-205ENST00000397007 GPRASP1Q5JY77 1395 aa15.67■□□□□ 0.1
NUP98-205ENST00000397007 RALGAPBQ86X10 1494 aa15.66■□□□□ 0.1
NUP98-205ENST00000397007 PIK3R4Q99570 1358 aa15.66■□□□□ 0.1
NUP98-205ENST00000397007 NKTRP30414 1462 aaKnown RBP15.66■□□□□ 0.1
NUP98-205ENST00000397007 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
NUP98-205ENST00000397007 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.66■□□□□ 0.1
NUP98-205ENST00000397007 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
NUP98-205ENST00000397007 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
NUP98-205ENST00000397007 PTCH1Q13635 1447 aa15.63■□□□□ 0.09
NUP98-205ENST00000397007 TOPAZ1Q8N9V7 1692 aa15.62■□□□□ 0.09
NUP98-205ENST00000397007 TIMELESSQ9UNS1 1208 aa15.61■□□□□ 0.09
NUP98-205ENST00000397007 ADGRF5Q8IZF2 1346 aa15.6■□□□□ 0.09
NUP98-205ENST00000397007 SIN3AQ96ST3 1273 aa15.59■□□□□ 0.09
NUP98-205ENST00000397007 QRICH2Q9H0J4 1663 aa15.59■□□□□ 0.09
NUP98-205ENST00000397007 FMN2Q9NZ56 1722 aa15.59■□□□□ 0.09
NUP98-205ENST00000397007 USP32Q8NFA0 1604 aa15.59■□□□□ 0.09
NUP98-205ENST00000397007 LRRC7Q96NW7 1537 aa15.58■□□□□ 0.08
NUP98-205ENST00000397007 HSPA2P54652 639 aa15.58■□□□□ 0.08
NUP98-205ENST00000397007 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.58■□□□□ 0.08
NUP98-205ENST00000397007 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.08
NUP98-205ENST00000397007 METP08581 1390 aa15.58■□□□□ 0.08
NUP98-205ENST00000397007 NCOA3Q9Y6Q9 1424 aa15.57■□□□□ 0.08
NUP98-205ENST00000397007 C14orf93Q9H972 538 aaKnown RBP15.56■□□□□ 0.08
NUP98-205ENST00000397007 CDC42BPGQ6DT37 1551 aa15.56■□□□□ 0.08
NUP98-205ENST00000397007 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
NUP98-205ENST00000397007 ANKLE2Q86XL3 938 aa15.55■□□□□ 0.08
NUP98-205ENST00000397007 FAM135BQ49AJ0 1406 aa15.55■□□□□ 0.08
NUP98-205ENST00000397007 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
NUP98-205ENST00000397007 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.08
NUP98-205ENST00000397007 ABCC11Q96J66 1382 aa15.52■□□□□ 0.08
NUP98-205ENST00000397007 NBPF8Q3BBV2 869 aa15.52■□□□□ 0.07
NUP98-205ENST00000397007 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
NUP98-205ENST00000397007 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
NUP98-205ENST00000397007 MYOM1P52179 1685 aa15.51■□□□□ 0.07
NUP98-205ENST00000397007 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
NUP98-205ENST00000397007 SIRT1Q96EB6 747 aa15.5■□□□□ 0.07
NUP98-205ENST00000397007 RGPD8O14715 1765 aaPredicted RBP15.5■□□□□ 0.07
NUP98-205ENST00000397007 NHSL1Q5SYE7 1610 aa15.48■□□□□ 0.07
NUP98-205ENST00000397007 USP54Q70EL1 1684 aa15.48■□□□□ 0.07
NUP98-205ENST00000397007 DCCP43146 1447 aa15.47■□□□□ 0.07
NUP98-205ENST00000397007 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
NUP98-205ENST00000397007 ITSN1Q15811 1721 aa15.47■□□□□ 0.07
NUP98-205ENST00000397007 TULP4Q9NRJ4 1543 aa15.47■□□□□ 0.07
NUP98-205ENST00000397007 ROBO2Q9HCK4 1378 aa15.46■□□□□ 0.07
NUP98-205ENST00000397007 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
NUP98-205ENST00000397007 SBNO2Q9Y2G9 1366 aa15.45■□□□□ 0.06
NUP98-205ENST00000397007 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
NUP98-205ENST00000397007 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
NUP98-205ENST00000397007 EID1Q9Y6B2 187 aa15.45■□□□□ 0.06
NUP98-205ENST00000397007 NRKQ7Z2Y5 1582 aa15.45■□□□□ 0.06
NUP98-205ENST00000397007 CRYBG1Q9Y4K1 1723 aa15.45■□□□□ 0.06
NUP98-205ENST00000397007 MARF1Q9Y4F3 1742 aaKnown RBP15.44■□□□□ 0.06
NUP98-205ENST00000397007 KCNA6P17658 529 aa15.44■□□□□ 0.06
NUP98-205ENST00000397007 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
NUP98-205ENST00000397007 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
NUP98-205ENST00000397007 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
NUP98-205ENST00000397007 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
NUP98-205ENST00000397007 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
NUP98-205ENST00000397007 TONSLQ96HA7 1378 aa15.41■□□□□ 0.06
NUP98-205ENST00000397007 KIF1AQ12756 1690 aa15.41■□□□□ 0.06
NUP98-205ENST00000397007 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
NUP98-205ENST00000397007 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
NUP98-205ENST00000397007 CFAP70Q5T0N1 1121 aa15.4■□□□□ 0.06
NUP98-205ENST00000397007 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
NUP98-205ENST00000397007 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
NUP98-205ENST00000397007 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
NUP98-205ENST00000397007 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
NUP98-205ENST00000397007 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
NUP98-205ENST00000397007 NBPF1Q3BBV0 1214 aa15.38■□□□□ 0.05
NUP98-205ENST00000397007 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
NUP98-205ENST00000397007 ROBO1Q9Y6N7 1651 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms