RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 RIMS2Q9UQ26 1411 aa25.07■■□□□ 1.6
HLA-A-204ENST00000396634 SLIT1O75093 1534 aa25.07■■□□□ 1.6
HLA-A-204ENST00000396634 ARHGAP23Q9P227 1491 aa25.06■■□□□ 1.6
HLA-A-204ENST00000396634 ZFYVE9O95405 1425 aa25.06■■□□□ 1.6
HLA-A-204ENST00000396634 NEXMIFQ5QGS0 1516 aa25.06■■□□□ 1.6
HLA-A-204ENST00000396634 PPLO60437 1756 aa25.05■■□□□ 1.6
HLA-A-204ENST00000396634 NEURL4Q96JN8 1562 aa25.04■■□□□ 1.6
HLA-A-204ENST00000396634 IFT172Q9UG01 1749 aa25.04■■□□□ 1.6
HLA-A-204ENST00000396634 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
HLA-A-204ENST00000396634 SCAF11Q99590 1463 aaKnown RBP25.02■■□□□ 1.6
HLA-A-204ENST00000396634 ANKLE2Q86XL3 938 aa25■■□□□ 1.59
HLA-A-204ENST00000396634 PPP1R15AO75807 674 aaPredicted RBP24.99■■□□□ 1.59
HLA-A-204ENST00000396634 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
HLA-A-204ENST00000396634 EID1Q9Y6B2 187 aa24.97■■□□□ 1.59
HLA-A-204ENST00000396634 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
HLA-A-204ENST00000396634 IQGAP1P46940 1657 aa24.95■■□□□ 1.59
HLA-A-204ENST00000396634 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
HLA-A-204ENST00000396634 L3MBTL2Q969R5 705 aa24.94■■□□□ 1.58
HLA-A-204ENST00000396634 BCANQ96GW7 911 aa24.94■■□□□ 1.58
HLA-A-204ENST00000396634 NPHP4O75161 1426 aaPredicted RBP24.93■■□□□ 1.58
HLA-A-204ENST00000396634 NRXN3Q9Y4C0 1643 aa24.92■■□□□ 1.58
HLA-A-204ENST00000396634 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
HLA-A-204ENST00000396634 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
HLA-A-204ENST00000396634 RPGRIP1LQ68CZ1 1315 aa24.9■■□□□ 1.58
HLA-A-204ENST00000396634 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.89■■□□□ 1.58
HLA-A-204ENST00000396634 MED14O60244 1454 aa24.89■■□□□ 1.58
HLA-A-204ENST00000396634 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
HLA-A-204ENST00000396634 PLEKHG1Q9ULL1 1385 aa24.88■■□□□ 1.57
HLA-A-204ENST00000396634 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
HLA-A-204ENST00000396634 MYOM2P54296 1465 aa24.86■■□□□ 1.57
HLA-A-204ENST00000396634 HDGFP51858 240 aaKnown RBP24.85■■□□□ 1.57
HLA-A-204ENST00000396634 ADAMTS13Q76LX8 1427 aa24.84■■□□□ 1.57
HLA-A-204ENST00000396634 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
HLA-A-204ENST00000396634 PIK3C2GO75747 1445 aa24.83■■□□□ 1.57
HLA-A-204ENST00000396634 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
HLA-A-204ENST00000396634 NRXN1Q9ULB1 1477 aa24.82■■□□□ 1.56
HLA-A-204ENST00000396634 ALKQ9UM73 1620 aa24.81■■□□□ 1.56
HLA-A-204ENST00000396634 CFAP70Q5T0N1 1121 aa24.79■■□□□ 1.56
HLA-A-204ENST00000396634 PRAG1Q86YV5 1406 aa24.77■■□□□ 1.56
HLA-A-204ENST00000396634 STRCP1A6NGW2 1772 aa24.77■■□□□ 1.56
HLA-A-204ENST00000396634 METP08581 1390 aa24.77■■□□□ 1.56
HLA-A-204ENST00000396634 ZNF335Q9H4Z2 1342 aaPredicted RBP24.77■■□□□ 1.56
HLA-A-204ENST00000396634 NBPF8Q3BBV2 869 aa24.77■■□□□ 1.56
HLA-A-204ENST00000396634 ASXL1Q8IXJ9 1541 aa24.76■■□□□ 1.55
HLA-A-204ENST00000396634 TMEM132EQ6IEE7 984 aa24.75■■□□□ 1.55
HLA-A-204ENST00000396634 DMRT2Q9Y5R5 561 aa24.75■■□□□ 1.55
HLA-A-204ENST00000396634 DIP2AQ14689 1571 aa24.73■■□□□ 1.55
HLA-A-204ENST00000396634 MYT1Q01538 1121 aa24.73■■□□□ 1.55
HLA-A-204ENST00000396634 PTPRUQ92729 1446 aa24.72■■□□□ 1.55
HLA-A-204ENST00000396634 CHD2O14647 1828 aaKnown RBP24.71■■□□□ 1.55
HLA-A-204ENST00000396634 TRPM1Q7Z4N2 1603 aa24.71■■□□□ 1.55
HLA-A-204ENST00000396634 TBX22Q9Y458 520 aa24.7■■□□□ 1.55
HLA-A-204ENST00000396634 LAMC1P11047 1609 aa24.7■■□□□ 1.55
HLA-A-204ENST00000396634 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.54
HLA-A-204ENST00000396634 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
HLA-A-204ENST00000396634 STK26Q9P289 416 aa24.68■■□□□ 1.54
HLA-A-204ENST00000396634 RBM33Q96EV2 1170 aaKnown RBP24.67■■□□□ 1.54
HLA-A-204ENST00000396634 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
HLA-A-204ENST00000396634 STAC3Q96MF2 364 aa24.65■■□□□ 1.54
HLA-A-204ENST00000396634 KIAA1210Q9ULL0 1709 aa24.65■■□□□ 1.54
HLA-A-204ENST00000396634 KCNA6P17658 529 aa24.64■■□□□ 1.54
HLA-A-204ENST00000396634 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.54
HLA-A-204ENST00000396634 AMOTL2Q9Y2J4 779 aa24.64■■□□□ 1.53
HLA-A-204ENST00000396634 NWD1Q149M9 1564 aa24.63■■□□□ 1.53
HLA-A-204ENST00000396634 LTBP4Q8N2S1 1624 aa24.62■■□□□ 1.53
HLA-A-204ENST00000396634 TIMELESSQ9UNS1 1208 aa24.61■■□□□ 1.53
HLA-A-204ENST00000396634 YTHDC2Q9H6S0 1430 aaKnown RBP24.6■■□□□ 1.53
HLA-A-204ENST00000396634 ROCK2O75116 1388 aaKnown RBP24.6■■□□□ 1.53
HLA-A-204ENST00000396634 RALGAPBQ86X10 1494 aa24.58■■□□□ 1.53
HLA-A-204ENST00000396634 PIK3R4Q99570 1358 aa24.58■■□□□ 1.53
HLA-A-204ENST00000396634 XIRP1Q702N8 1843 aaKnown RBP24.58■■□□□ 1.52
HLA-A-204ENST00000396634 TRAK1Q9UPV9 953 aa24.58■■□□□ 1.52
HLA-A-204ENST00000396634 ROBO2Q9HCK4 1378 aa24.57■■□□□ 1.52
HLA-A-204ENST00000396634 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
HLA-A-204ENST00000396634 KNDC1Q76NI1 1749 aa24.55■■□□□ 1.52
HLA-A-204ENST00000396634 ARHGEF28Q8N1W1 1705 aaKnown RBP24.54■■□□□ 1.52
HLA-A-204ENST00000396634 SAFB2Q14151 953 aaKnown RBP eCLIP24.54■■□□□ 1.52
HLA-A-204ENST00000396634 PLEKHH1Q9ULM0 1364 aa24.54■■□□□ 1.52
HLA-A-204ENST00000396634 LRRC7Q96NW7 1537 aa24.54■■□□□ 1.52
HLA-A-204ENST00000396634 WAPLQ7Z5K2 1190 aa24.53■■□□□ 1.52
HLA-A-204ENST00000396634 NKTRP30414 1462 aaKnown RBP24.53■■□□□ 1.52
HLA-A-204ENST00000396634 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
HLA-A-204ENST00000396634 PROSER2Q86WR7 435 aaPredicted RBP24.53■■□□□ 1.52
HLA-A-204ENST00000396634 CPS1P31327 1500 aa24.53■■□□□ 1.52
HLA-A-204ENST00000396634 CARD11Q9BXL7 1154 aa24.51■■□□□ 1.51
HLA-A-204ENST00000396634 TMEM94Q12767 1356 aa24.5■■□□□ 1.51
HLA-A-204ENST00000396634 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
HLA-A-204ENST00000396634 TECPR2O15040 1411 aa24.49■■□□□ 1.51
HLA-A-204ENST00000396634 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
HLA-A-204ENST00000396634 GPRASP1Q5JY77 1395 aa24.48■■□□□ 1.51
HLA-A-204ENST00000396634 PTCH1Q13635 1447 aa24.48■■□□□ 1.51
HLA-A-204ENST00000396634 NALCNQ8IZF0 1738 aa24.48■■□□□ 1.51
HLA-A-204ENST00000396634 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.46■■□□□ 1.51
HLA-A-204ENST00000396634 C14orf37Q86TY3 774 aa24.45■■□□□ 1.5
HLA-A-204ENST00000396634 DLC1Q96QB1 1528 aa24.44■■□□□ 1.5
HLA-A-204ENST00000396634 POGKQ9P215 609 aa24.43■■□□□ 1.5
HLA-A-204ENST00000396634 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
HLA-A-204ENST00000396634 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
HLA-A-204ENST00000396634 MINK1Q8N4C8 1332 aaPredicted RBP24.4■■□□□ 1.5
HLA-A-204ENST00000396634 CERKQ8TCT0 537 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms