RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 CCDC144AA2RUR9 1427 aa26.28■■□□□ 1.8
TNFSF13-204ENST00000396542 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
TNFSF13-204ENST00000396542 NEXMIFQ5QGS0 1516 aa26.25■■□□□ 1.79
TNFSF13-204ENST00000396542 HDGFP51858 240 aaKnown RBP26.25■■□□□ 1.79
TNFSF13-204ENST00000396542 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.24■■□□□ 1.79
TNFSF13-204ENST00000396542 PLEKHG1Q9ULL1 1385 aa26.23■■□□□ 1.79
TNFSF13-204ENST00000396542 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
TNFSF13-204ENST00000396542 ZNF335Q9H4Z2 1342 aaPredicted RBP26.22■■□□□ 1.79
TNFSF13-204ENST00000396542 SPATA31E1Q6ZUB1 1445 aa26.21■■□□□ 1.79
TNFSF13-204ENST00000396542 ZNF326Q5BKZ1 582 aaKnown RBP26.19■■□□□ 1.78
TNFSF13-204ENST00000396542 PPLO60437 1756 aa26.19■■□□□ 1.78
TNFSF13-204ENST00000396542 PPP1R15AO75807 674 aaPredicted RBP26.18■■□□□ 1.78
TNFSF13-204ENST00000396542 STRCP1A6NGW2 1772 aa26.18■■□□□ 1.78
TNFSF13-204ENST00000396542 IFT172Q9UG01 1749 aa26.17■■□□□ 1.78
TNFSF13-204ENST00000396542 NRXN3Q9Y4C0 1643 aa26.16■■□□□ 1.78
TNFSF13-204ENST00000396542 NUTM2DQ5VT03 806 aaPredicted RBP26.15■■□□□ 1.78
TNFSF13-204ENST00000396542 DIP2AQ14689 1571 aa26.15■■□□□ 1.78
TNFSF13-204ENST00000396542 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
TNFSF13-204ENST00000396542 RPGRIP1LQ68CZ1 1315 aa26.14■■□□□ 1.78
TNFSF13-204ENST00000396542 CPS1P31327 1500 aa26.14■■□□□ 1.78
TNFSF13-204ENST00000396542 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
TNFSF13-204ENST00000396542 CERKQ8TCT0 537 aa26.13■■□□□ 1.77
TNFSF13-204ENST00000396542 SLC26A8Q96RN1 970 aa26.12■■□□□ 1.77
TNFSF13-204ENST00000396542 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
TNFSF13-204ENST00000396542 NWD1Q149M9 1564 aa26.09■■□□□ 1.77
TNFSF13-204ENST00000396542 BCANQ96GW7 911 aa26.08■■□□□ 1.77
TNFSF13-204ENST00000396542 TBX22Q9Y458 520 aa26.08■■□□□ 1.77
TNFSF13-204ENST00000396542 CHD2O14647 1828 aaKnown RBP26.08■■□□□ 1.77
TNFSF13-204ENST00000396542 VGFO15240 615 aaPredicted RBP26.06■■□□□ 1.76
TNFSF13-204ENST00000396542 RGL3Q3MIN7 710 aa26.05■■□□□ 1.76
TNFSF13-204ENST00000396542 SENP3Q9H4L4 574 aaPredicted RBP26.05■■□□□ 1.76
TNFSF13-204ENST00000396542 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
TNFSF13-204ENST00000396542 SETD1AO15047 1707 aaKnown RBP26.04■■□□□ 1.76
TNFSF13-204ENST00000396542 PIK3R4Q99570 1358 aa26.03■■□□□ 1.76
TNFSF13-204ENST00000396542 LRRC7Q96NW7 1537 aa26.03■■□□□ 1.76
TNFSF13-204ENST00000396542 KCNA6P17658 529 aa26.02■■□□□ 1.76
TNFSF13-204ENST00000396542 NKTRP30414 1462 aaKnown RBP26■■□□□ 1.75
TNFSF13-204ENST00000396542 MYOM2P54296 1465 aa26■■□□□ 1.75
TNFSF13-204ENST00000396542 XIRP1Q702N8 1843 aaKnown RBP26■■□□□ 1.75
TNFSF13-204ENST00000396542 ALKQ9UM73 1620 aa25.99■■□□□ 1.75
TNFSF13-204ENST00000396542 NRXN1Q9ULB1 1477 aa25.98■■□□□ 1.75
TNFSF13-204ENST00000396542 ADGRF5Q8IZF2 1346 aa25.97■■□□□ 1.75
TNFSF13-204ENST00000396542 XRN1Q8IZH2 1706 aaKnown RBP25.97■■□□□ 1.75
TNFSF13-204ENST00000396542 PIK3C2GO75747 1445 aa25.96■■□□□ 1.75
TNFSF13-204ENST00000396542 PTPRUQ92729 1446 aa25.96■■□□□ 1.75
TNFSF13-204ENST00000396542 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.74
TNFSF13-204ENST00000396542 METP08581 1390 aa25.95■■□□□ 1.74
TNFSF13-204ENST00000396542 FBXO41Q8TF61 875 aa25.93■■□□□ 1.74
TNFSF13-204ENST00000396542 LAMC1P11047 1609 aa25.9■■□□□ 1.74
TNFSF13-204ENST00000396542 TMEM94Q12767 1356 aa25.88■■□□□ 1.73
TNFSF13-204ENST00000396542 AMOTL2Q9Y2J4 779 aa25.88■■□□□ 1.73
TNFSF13-204ENST00000396542 STAC3Q96MF2 364 aa25.87■■□□□ 1.73
TNFSF13-204ENST00000396542 PRAG1Q86YV5 1406 aa25.87■■□□□ 1.73
TNFSF13-204ENST00000396542 PROSER2Q86WR7 435 aaPredicted RBP25.86■■□□□ 1.73
TNFSF13-204ENST00000396542 ASXL1Q8IXJ9 1541 aa25.86■■□□□ 1.73
TNFSF13-204ENST00000396542 DCAF11Q8TEB1 546 aa25.85■■□□□ 1.73
TNFSF13-204ENST00000396542 SIN3AQ96ST3 1273 aa25.84■■□□□ 1.73
TNFSF13-204ENST00000396542 NCOA3Q9Y6Q9 1424 aa25.84■■□□□ 1.73
TNFSF13-204ENST00000396542 ILDR1Q86SU0 546 aaPredicted RBP25.82■■□□□ 1.72
TNFSF13-204ENST00000396542 C14orf93Q9H972 538 aaKnown RBP25.82■■□□□ 1.72
TNFSF13-204ENST00000396542 PTCH1Q13635 1447 aa25.8■■□□□ 1.72
TNFSF13-204ENST00000396542 KNDC1Q76NI1 1749 aa25.8■■□□□ 1.72
TNFSF13-204ENST00000396542 UBAP1LF5GYI3 381 aa25.79■■□□□ 1.72
TNFSF13-204ENST00000396542 RBM33Q96EV2 1170 aaKnown RBP25.79■■□□□ 1.72
TNFSF13-204ENST00000396542 KDM2AQ9Y2K7 1162 aa25.79■■□□□ 1.72
TNFSF13-204ENST00000396542 CFAP70Q5T0N1 1121 aa25.77■■□□□ 1.72
TNFSF13-204ENST00000396542 TECPR2O15040 1411 aa25.77■■□□□ 1.72
TNFSF13-204ENST00000396542 LRPPRCP42704 1394 aaKnown RBP25.76■■□□□ 1.71
TNFSF13-204ENST00000396542 ADGRB1O14514 1584 aa25.76■■□□□ 1.71
TNFSF13-204ENST00000396542 KIAA1210Q9ULL0 1709 aa25.75■■□□□ 1.71
TNFSF13-204ENST00000396542 TOM1O60784 492 aa25.75■■□□□ 1.71
TNFSF13-204ENST00000396542 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
TNFSF13-204ENST00000396542 YTHDC2Q9H6S0 1430 aaKnown RBP25.74■■□□□ 1.71
TNFSF13-204ENST00000396542 ROBO2Q9HCK4 1378 aa25.74■■□□□ 1.71
TNFSF13-204ENST00000396542 L3MBTL2Q969R5 705 aa25.74■■□□□ 1.71
TNFSF13-204ENST00000396542 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
TNFSF13-204ENST00000396542 MSH6P52701 1360 aa25.73■■□□□ 1.71
TNFSF13-204ENST00000396542 TMEM132EQ6IEE7 984 aa25.73■■□□□ 1.71
TNFSF13-204ENST00000396542 ABCC11Q96J66 1382 aa25.72■■□□□ 1.71
TNFSF13-204ENST00000396542 NALCNQ8IZF0 1738 aa25.72■■□□□ 1.71
TNFSF13-204ENST00000396542 ADGRL3Q9HAR2 1447 aa25.69■■□□□ 1.7
TNFSF13-204ENST00000396542 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
TNFSF13-204ENST00000396542 DCCP43146 1447 aa25.68■■□□□ 1.7
TNFSF13-204ENST00000396542 C14orf37Q86TY3 774 aa25.66■■□□□ 1.7
TNFSF13-204ENST00000396542 STK26Q9P289 416 aa25.66■■□□□ 1.7
TNFSF13-204ENST00000396542 DLC1Q96QB1 1528 aa25.66■■□□□ 1.7
TNFSF13-204ENST00000396542 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
TNFSF13-204ENST00000396542 FAM135BQ49AJ0 1406 aa25.65■■□□□ 1.7
TNFSF13-204ENST00000396542 SIRT1Q96EB6 747 aa25.65■■□□□ 1.7
TNFSF13-204ENST00000396542 TRPM1Q7Z4N2 1603 aa25.63■■□□□ 1.69
TNFSF13-204ENST00000396542 TONSLQ96HA7 1378 aa25.62■■□□□ 1.69
TNFSF13-204ENST00000396542 PIP4K2BP78356 416 aa25.62■■□□□ 1.69
TNFSF13-204ENST00000396542 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
TNFSF13-204ENST00000396542 PLEKHH1Q9ULM0 1364 aa25.59■■□□□ 1.69
TNFSF13-204ENST00000396542 ROBO1Q9Y6N7 1651 aa25.59■■□□□ 1.69
TNFSF13-204ENST00000396542 CDC42BPGQ6DT37 1551 aa25.59■■□□□ 1.69
TNFSF13-204ENST00000396542 ARHGEF28Q8N1W1 1705 aaKnown RBP25.59■■□□□ 1.69
TNFSF13-204ENST00000396542 ATF3P18847 181 aa25.58■■□□□ 1.69
TNFSF13-204ENST00000396542 WAPLQ7Z5K2 1190 aa25.58■■□□□ 1.69
TNFSF13-204ENST00000396542 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms