RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 HDGFP51858 240 aaKnown RBP28.11■■■□□ 2.09
HOXA9-202ENST00000396345 FBXO41Q8TF61 875 aa28.11■■■□□ 2.09
HOXA9-202ENST00000396345 NEURL4Q96JN8 1562 aa28.11■■■□□ 2.09
HOXA9-202ENST00000396345 DHX57Q6P158 1386 aaKnown RBP28.11■■■□□ 2.09
HOXA9-202ENST00000396345 ZFYVE9O95405 1425 aa28.09■■■□□ 2.09
HOXA9-202ENST00000396345 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
HOXA9-202ENST00000396345 MED14O60244 1454 aa28.08■■■□□ 2.09
HOXA9-202ENST00000396345 NPHP4O75161 1426 aaPredicted RBP28.07■■■□□ 2.08
HOXA9-202ENST00000396345 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
HOXA9-202ENST00000396345 SPATA31E1Q6ZUB1 1445 aa28.05■■■□□ 2.08
HOXA9-202ENST00000396345 NUTM2DQ5VT03 806 aaPredicted RBP28.04■■■□□ 2.08
HOXA9-202ENST00000396345 IQGAP1P46940 1657 aa28.03■■■□□ 2.08
HOXA9-202ENST00000396345 RGL3Q3MIN7 710 aa28.03■■■□□ 2.08
HOXA9-202ENST00000396345 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
HOXA9-202ENST00000396345 NEXMIFQ5QGS0 1516 aa28.01■■■□□ 2.07
HOXA9-202ENST00000396345 BCANQ96GW7 911 aa27.98■■■□□ 2.07
HOXA9-202ENST00000396345 PLEKHG1Q9ULL1 1385 aa27.98■■■□□ 2.07
HOXA9-202ENST00000396345 SENP3Q9H4L4 574 aaPredicted RBP27.96■■■□□ 2.07
HOXA9-202ENST00000396345 PPLO60437 1756 aa27.95■■■□□ 2.06
HOXA9-202ENST00000396345 VGFO15240 615 aaPredicted RBP27.94■■■□□ 2.06
HOXA9-202ENST00000396345 CERKQ8TCT0 537 aa27.91■■■□□ 2.06
HOXA9-202ENST00000396345 SLC26A8Q96RN1 970 aa27.91■■■□□ 2.06
HOXA9-202ENST00000396345 SIN3AQ96ST3 1273 aa27.91■■■□□ 2.06
HOXA9-202ENST00000396345 IFT172Q9UG01 1749 aa27.9■■■□□ 2.06
HOXA9-202ENST00000396345 NEUROD1Q13562 356 aa27.87■■■□□ 2.05
HOXA9-202ENST00000396345 ZNF335Q9H4Z2 1342 aaPredicted RBP27.86■■■□□ 2.05
HOXA9-202ENST00000396345 SETBP1Q9Y6X0 1596 aa27.86■■■□□ 2.05
HOXA9-202ENST00000396345 TBX22Q9Y458 520 aa27.85■■■□□ 2.05
HOXA9-202ENST00000396345 ADAMTS13Q76LX8 1427 aa27.84■■■□□ 2.05
HOXA9-202ENST00000396345 ADGRF5Q8IZF2 1346 aa27.84■■■□□ 2.05
HOXA9-202ENST00000396345 NRXN3Q9Y4C0 1643 aa27.83■■■□□ 2.05
HOXA9-202ENST00000396345 DCAF11Q8TEB1 546 aa27.83■■■□□ 2.05
HOXA9-202ENST00000396345 DIP2AQ14689 1571 aa27.82■■■□□ 2.04
HOXA9-202ENST00000396345 MYOM2P54296 1465 aa27.81■■■□□ 2.04
HOXA9-202ENST00000396345 KDM2AQ9Y2K7 1162 aa27.8■■■□□ 2.04
HOXA9-202ENST00000396345 STAC3Q96MF2 364 aa27.78■■■□□ 2.04
HOXA9-202ENST00000396345 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
HOXA9-202ENST00000396345 CCER1Q8TC90 406 aaPredicted RBP27.76■■■□□ 2.03
HOXA9-202ENST00000396345 NRXN1Q9ULB1 1477 aa27.76■■■□□ 2.03
HOXA9-202ENST00000396345 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
HOXA9-202ENST00000396345 ALKQ9UM73 1620 aa27.75■■■□□ 2.03
HOXA9-202ENST00000396345 CLSPNQ9HAW4 1339 aa27.74■■■□□ 2.03
HOXA9-202ENST00000396345 STRCP1A6NGW2 1772 aa27.74■■■□□ 2.03
HOXA9-202ENST00000396345 KCNA6P17658 529 aa27.74■■■□□ 2.03
HOXA9-202ENST00000396345 L3MBTL2Q969R5 705 aa27.74■■■□□ 2.03
HOXA9-202ENST00000396345 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
HOXA9-202ENST00000396345 CHD2O14647 1828 aaKnown RBP27.72■■■□□ 2.03
HOXA9-202ENST00000396345 METP08581 1390 aa27.72■■■□□ 2.03
HOXA9-202ENST00000396345 CPS1P31327 1500 aa27.72■■■□□ 2.03
HOXA9-202ENST00000396345 SETD1AO15047 1707 aaKnown RBP27.71■■■□□ 2.03
HOXA9-202ENST00000396345 NWD1Q149M9 1564 aa27.69■■■□□ 2.02
HOXA9-202ENST00000396345 C14orf93Q9H972 538 aaKnown RBP27.68■■■□□ 2.02
HOXA9-202ENST00000396345 TONSLQ96HA7 1378 aa27.68■■■□□ 2.02
HOXA9-202ENST00000396345 PTPRUQ92729 1446 aa27.67■■■□□ 2.02
HOXA9-202ENST00000396345 CFAP70Q5T0N1 1121 aa27.66■■■□□ 2.02
HOXA9-202ENST00000396345 AMOTL2Q9Y2J4 779 aa27.66■■■□□ 2.02
HOXA9-202ENST00000396345 LAMC1P11047 1609 aa27.64■■■□□ 2.02
HOXA9-202ENST00000396345 NKTRP30414 1462 aaKnown RBP27.64■■■□□ 2.01
HOXA9-202ENST00000396345 LRRC7Q96NW7 1537 aa27.62■■■□□ 2.01
HOXA9-202ENST00000396345 PROSER2Q86WR7 435 aaPredicted RBP27.62■■■□□ 2.01
HOXA9-202ENST00000396345 PRAG1Q86YV5 1406 aa27.61■■■□□ 2.01
HOXA9-202ENST00000396345 TMEM132EQ6IEE7 984 aa27.61■■■□□ 2.01
HOXA9-202ENST00000396345 XRN1Q8IZH2 1706 aaKnown RBP27.61■■■□□ 2.01
HOXA9-202ENST00000396345 ASXL1Q8IXJ9 1541 aa27.59■■■□□ 2.01
HOXA9-202ENST00000396345 IQSEC2Q5JU85 1478 aa27.57■■■□□ 2
HOXA9-202ENST00000396345 TMEM94Q12767 1356 aa27.56■■■□□ 2
HOXA9-202ENST00000396345 STK26Q9P289 416 aa27.55■■■□□ 2
HOXA9-202ENST00000396345 LRPPRCP42704 1394 aaKnown RBP27.55■■■□□ 2
HOXA9-202ENST00000396345 RBM33Q96EV2 1170 aaKnown RBP27.54■■■□□ 2
HOXA9-202ENST00000396345 YTHDC2Q9H6S0 1430 aaKnown RBP27.54■■■□□ 2
HOXA9-202ENST00000396345 KIAA1210Q9ULL0 1709 aa27.54■■■□□ 2
HOXA9-202ENST00000396345 XIRP1Q702N8 1843 aaKnown RBP27.53■■■□□ 2
HOXA9-202ENST00000396345 TIMELESSQ9UNS1 1208 aa27.52■■■□□ 2
HOXA9-202ENST00000396345 ADGRB1O14514 1584 aa27.52■■■□□ 2
HOXA9-202ENST00000396345 ABCC11Q96J66 1382 aa27.51■■□□□ 1.99
HOXA9-202ENST00000396345 PTCH1Q13635 1447 aa27.5■■□□□ 1.99
HOXA9-202ENST00000396345 ROBO2Q9HCK4 1378 aa27.49■■□□□ 1.99
HOXA9-202ENST00000396345 NBPF8Q3BBV2 869 aa27.49■■□□□ 1.99
HOXA9-202ENST00000396345 TECPR2O15040 1411 aa27.49■■□□□ 1.99
HOXA9-202ENST00000396345 KNDC1Q76NI1 1749 aa27.48■■□□□ 1.99
HOXA9-202ENST00000396345 NBPF1Q3BBV0 1214 aa27.48■■□□□ 1.99
HOXA9-202ENST00000396345 NCOA3Q9Y6Q9 1424 aa27.48■■□□□ 1.99
HOXA9-202ENST00000396345 C14orf37Q86TY3 774 aa27.47■■□□□ 1.99
HOXA9-202ENST00000396345 TRPM1Q7Z4N2 1603 aa27.46■■□□□ 1.99
HOXA9-202ENST00000396345 SIRT1Q96EB6 747 aa27.43■■□□□ 1.98
HOXA9-202ENST00000396345 TRAK1Q9UPV9 953 aa27.43■■□□□ 1.98
HOXA9-202ENST00000396345 MSH6P52701 1360 aa27.43■■□□□ 1.98
HOXA9-202ENST00000396345 WAPLQ7Z5K2 1190 aa27.42■■□□□ 1.98
HOXA9-202ENST00000396345 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
HOXA9-202ENST00000396345 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
HOXA9-202ENST00000396345 FAM135BQ49AJ0 1406 aa27.41■■□□□ 1.98
HOXA9-202ENST00000396345 ROCK2O75116 1388 aaKnown RBP27.4■■□□□ 1.98
HOXA9-202ENST00000396345 C19orf44Q9H6X5 657 aa27.4■■□□□ 1.98
HOXA9-202ENST00000396345 PLEKHH1Q9ULM0 1364 aa27.38■■□□□ 1.97
HOXA9-202ENST00000396345 TOM1O60784 492 aa27.38■■□□□ 1.97
HOXA9-202ENST00000396345 PRAM1Q96QH2 718 aa27.37■■□□□ 1.97
HOXA9-202ENST00000396345 ADGRL3Q9HAR2 1447 aa27.37■■□□□ 1.97
HOXA9-202ENST00000396345 POGKQ9P215 609 aa27.37■■□□□ 1.97
HOXA9-202ENST00000396345 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
HOXA9-202ENST00000396345 RALGAPBQ86X10 1494 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms