RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 SLIT1O75093 1534 aa14.2□□□□□ -0.14
DDX39B-202ENST00000396172 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
DDX39B-202ENST00000396172 TRPM1Q7Z4N2 1603 aa14.18□□□□□ -0.14
DDX39B-202ENST00000396172 L3MBTL2Q969R5 705 aa14.17□□□□□ -0.14
DDX39B-202ENST00000396172 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
DDX39B-202ENST00000396172 RGL3Q3MIN7 710 aa14.17□□□□□ -0.14
DDX39B-202ENST00000396172 ARHGAP23Q9P227 1491 aa14.16□□□□□ -0.14
DDX39B-202ENST00000396172 RIMS2Q9UQ26 1411 aa14.16□□□□□ -0.14
DDX39B-202ENST00000396172 HDGFP51858 240 aaKnown RBP14.15□□□□□ -0.14
DDX39B-202ENST00000396172 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
DDX39B-202ENST00000396172 NRXN1Q9ULB1 1477 aa14.15□□□□□ -0.14
DDX39B-202ENST00000396172 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX39B-202ENST00000396172 DCAF11Q8TEB1 546 aa14.15□□□□□ -0.14
DDX39B-202ENST00000396172 TMEM2Q9UHN6 1383 aa14.14□□□□□ -0.15
DDX39B-202ENST00000396172 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
DDX39B-202ENST00000396172 PRAG1Q86YV5 1406 aa14.14□□□□□ -0.15
DDX39B-202ENST00000396172 SETBP1Q9Y6X0 1596 aa14.12□□□□□ -0.15
DDX39B-202ENST00000396172 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
DDX39B-202ENST00000396172 DIP2AQ14689 1571 aa14.12□□□□□ -0.15
DDX39B-202ENST00000396172 PPP1R15AO75807 674 aaPredicted RBP14.12□□□□□ -0.15
DDX39B-202ENST00000396172 RALGAPBQ86X10 1494 aa14.12□□□□□ -0.15
DDX39B-202ENST00000396172 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
DDX39B-202ENST00000396172 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
DDX39B-202ENST00000396172 SCAF11Q99590 1463 aaKnown RBP14.11□□□□□ -0.15
DDX39B-202ENST00000396172 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
DDX39B-202ENST00000396172 EID1Q9Y6B2 187 aa14.11□□□□□ -0.15
DDX39B-202ENST00000396172 NRXN3Q9Y4C0 1643 aa14.1□□□□□ -0.15
DDX39B-202ENST00000396172 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
DDX39B-202ENST00000396172 PLEKHG1Q9ULL1 1385 aa14.08□□□□□ -0.16
DDX39B-202ENST00000396172 ALKQ9UM73 1620 aa14.07□□□□□ -0.16
DDX39B-202ENST00000396172 KNDC1Q76NI1 1749 aa14.06□□□□□ -0.16
DDX39B-202ENST00000396172 MED14O60244 1454 aa14.06□□□□□ -0.16
DDX39B-202ENST00000396172 ANKLE2Q86XL3 938 aa14.05□□□□□ -0.16
DDX39B-202ENST00000396172 STRCQ7RTU9 1775 aa14.05□□□□□ -0.16
DDX39B-202ENST00000396172 ADGRF5Q8IZF2 1346 aa14.05□□□□□ -0.16
DDX39B-202ENST00000396172 TXNDC2Q86VQ3 553 aa14.04□□□□□ -0.16
DDX39B-202ENST00000396172 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
DDX39B-202ENST00000396172 GPRASP1Q5JY77 1395 aa14.03□□□□□ -0.16
DDX39B-202ENST00000396172 ARHGEF28Q8N1W1 1705 aaKnown RBP14.02□□□□□ -0.16
DDX39B-202ENST00000396172 NBPF8Q3BBV2 869 aa14.02□□□□□ -0.16
DDX39B-202ENST00000396172 CHD2O14647 1828 aaKnown RBP14.02□□□□□ -0.16
DDX39B-202ENST00000396172 ADGRB1O14514 1584 aa14.02□□□□□ -0.17
DDX39B-202ENST00000396172 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
DDX39B-202ENST00000396172 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
DDX39B-202ENST00000396172 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
DDX39B-202ENST00000396172 LTKP29376 864 aa14□□□□□ -0.17
DDX39B-202ENST00000396172 C14orf93Q9H972 538 aaKnown RBP14□□□□□ -0.17
DDX39B-202ENST00000396172 BCANQ96GW7 911 aa13.99□□□□□ -0.17
DDX39B-202ENST00000396172 ADAMTS13Q76LX8 1427 aa13.99□□□□□ -0.17
DDX39B-202ENST00000396172 EIF3AQ14152 1382 aaKnown RBP13.99□□□□□ -0.17
DDX39B-202ENST00000396172 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
DDX39B-202ENST00000396172 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
DDX39B-202ENST00000396172 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
DDX39B-202ENST00000396172 CPS1P31327 1500 aa13.97□□□□□ -0.17
DDX39B-202ENST00000396172 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
DDX39B-202ENST00000396172 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
DDX39B-202ENST00000396172 CARD11Q9BXL7 1154 aa13.97□□□□□ -0.17
DDX39B-202ENST00000396172 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
DDX39B-202ENST00000396172 PELP1Q8IZL8 1130 aaKnown RBP13.96□□□□□ -0.18
DDX39B-202ENST00000396172 TBX22Q9Y458 520 aa13.95□□□□□ -0.18
DDX39B-202ENST00000396172 USP47Q96K76 1375 aa13.95□□□□□ -0.18
DDX39B-202ENST00000396172 YTHDC2Q9H6S0 1430 aaKnown RBP13.95□□□□□ -0.18
DDX39B-202ENST00000396172 AEBP2Q6ZN18 517 aaPredicted RBP13.94□□□□□ -0.18
DDX39B-202ENST00000396172 HSPA2P54652 639 aa13.94□□□□□ -0.18
DDX39B-202ENST00000396172 TECPR2O15040 1411 aa13.94□□□□□ -0.18
DDX39B-202ENST00000396172 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
DDX39B-202ENST00000396172 LRPPRCP42704 1394 aaKnown RBP13.93□□□□□ -0.18
DDX39B-202ENST00000396172 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
DDX39B-202ENST00000396172 NBPF1Q3BBV0 1214 aa13.93□□□□□ -0.18
DDX39B-202ENST00000396172 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
DDX39B-202ENST00000396172 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
DDX39B-202ENST00000396172 METP08581 1390 aa13.91□□□□□ -0.18
DDX39B-202ENST00000396172 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
DDX39B-202ENST00000396172 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
DDX39B-202ENST00000396172 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
DDX39B-202ENST00000396172 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
DDX39B-202ENST00000396172 STRCP1A6NGW2 1772 aa13.89□□□□□ -0.19
DDX39B-202ENST00000396172 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
DDX39B-202ENST00000396172 TMEM132EQ6IEE7 984 aa13.88□□□□□ -0.19
DDX39B-202ENST00000396172 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
DDX39B-202ENST00000396172 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
DDX39B-202ENST00000396172 ADGRB2O60241 1585 aa13.87□□□□□ -0.19
DDX39B-202ENST00000396172 PTPRUQ92729 1446 aa13.86□□□□□ -0.19
DDX39B-202ENST00000396172 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
DDX39B-202ENST00000396172 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
DDX39B-202ENST00000396172 CENPJQ9HC77 1338 aaPredicted RBP13.86□□□□□ -0.19
DDX39B-202ENST00000396172 TRAK1Q9UPV9 953 aa13.85□□□□□ -0.19
DDX39B-202ENST00000396172 NALCNQ8IZF0 1738 aa13.85□□□□□ -0.19
DDX39B-202ENST00000396172 STK26Q9P289 416 aa13.84□□□□□ -0.19
DDX39B-202ENST00000396172 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
DDX39B-202ENST00000396172 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
DDX39B-202ENST00000396172 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
DDX39B-202ENST00000396172 KCNA6P17658 529 aa13.83□□□□□ -0.2
DDX39B-202ENST00000396172 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-202ENST00000396172 ST20-MTHFSA0A0A6YYL1 179 aa13.82□□□□□ -0.2
DDX39B-202ENST00000396172 POGKQ9P215 609 aa13.82□□□□□ -0.2
DDX39B-202ENST00000396172 ROBO2Q9HCK4 1378 aa13.81□□□□□ -0.2
DDX39B-202ENST00000396172 CDC42BPGQ6DT37 1551 aa13.81□□□□□ -0.2
DDX39B-202ENST00000396172 PRAM1Q96QH2 718 aa13.81□□□□□ -0.2
DDX39B-202ENST00000396172 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms