RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 PIK3C2BO00750 1634 aa24.78■■□□□ 1.56
CLDND1-204ENST00000394185 ARHGEF40Q8TER5 1519 aa24.77■■□□□ 1.56
CLDND1-204ENST00000394185 CCDC184Q52MB2 194 aa24.77■■□□□ 1.56
CLDND1-204ENST00000394185 AGLP35573 1532 aa24.77■■□□□ 1.56
CLDND1-204ENST00000394185 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
CLDND1-204ENST00000394185 IDI1Q13907 227 aa24.76■■□□□ 1.55
CLDND1-204ENST00000394185 IQGAP1P46940 1657 aa24.76■■□□□ 1.55
CLDND1-204ENST00000394185 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
CLDND1-204ENST00000394185 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
CLDND1-204ENST00000394185 SCAF11Q99590 1463 aaKnown RBP24.73■■□□□ 1.55
CLDND1-204ENST00000394185 PREX1Q8TCU6 1659 aa24.73■■□□□ 1.55
CLDND1-204ENST00000394185 GTF3C3Q9Y5Q9 886 aa24.73■■□□□ 1.55
CLDND1-204ENST00000394185 PPLO60437 1756 aa24.72■■□□□ 1.55
CLDND1-204ENST00000394185 KIAA1210Q9ULL0 1709 aa24.71■■□□□ 1.55
CLDND1-204ENST00000394185 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
CLDND1-204ENST00000394185 PIK3C2GO75747 1445 aa24.68■■□□□ 1.54
CLDND1-204ENST00000394185 TMF1P82094 1093 aa24.67■■□□□ 1.54
CLDND1-204ENST00000394185 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
CLDND1-204ENST00000394185 ERVK-7P63135 1459 aa24.66■■□□□ 1.54
CLDND1-204ENST00000394185 NEXMIFQ5QGS0 1516 aa24.65■■□□□ 1.54
CLDND1-204ENST00000394185 RPGRIP1LQ68CZ1 1315 aa24.65■■□□□ 1.54
CLDND1-204ENST00000394185 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.53
CLDND1-204ENST00000394185 PPP6R1Q9UPN7 881 aa24.63■■□□□ 1.53
CLDND1-204ENST00000394185 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
CLDND1-204ENST00000394185 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
CLDND1-204ENST00000394185 TMEM132EQ6IEE7 984 aa24.61■■□□□ 1.53
CLDND1-204ENST00000394185 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
CLDND1-204ENST00000394185 TMEM131LA2VDJ0 1609 aa24.61■■□□□ 1.53
CLDND1-204ENST00000394185 MRS2Q9HD23 443 aa24.61■■□□□ 1.53
CLDND1-204ENST00000394185 EIF3AQ14152 1382 aaKnown RBP24.6■■□□□ 1.53
CLDND1-204ENST00000394185 ADGRB1O14514 1584 aa24.58■■□□□ 1.53
CLDND1-204ENST00000394185 VGFO15240 615 aaPredicted RBP24.57■■□□□ 1.52
CLDND1-204ENST00000394185 PER1O15534 1290 aaPredicted RBP24.57■■□□□ 1.52
CLDND1-204ENST00000394185 SETBP1Q9Y6X0 1596 aa24.57■■□□□ 1.52
CLDND1-204ENST00000394185 PANK3Q9H999 370 aa24.56■■□□□ 1.52
CLDND1-204ENST00000394185 TRAK1Q9UPV9 953 aa24.56■■□□□ 1.52
CLDND1-204ENST00000394185 SPATA31D1Q6ZQQ2 1576 aa24.55■■□□□ 1.52
CLDND1-204ENST00000394185 FAM9BQ8IZU0 186 aa24.54■■□□□ 1.52
CLDND1-204ENST00000394185 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
CLDND1-204ENST00000394185 ESF1Q9H501 851 aaKnown RBP24.52■■□□□ 1.52
CLDND1-204ENST00000394185 HNRNPUQ00839 825 aaKnown RBP eCLIP24.5■■□□□ 1.51
CLDND1-204ENST00000394185 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
CLDND1-204ENST00000394185 ZFYVE9O95405 1425 aa24.49■■□□□ 1.51
CLDND1-204ENST00000394185 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
CLDND1-204ENST00000394185 CENPJQ9HC77 1338 aaPredicted RBP24.48■■□□□ 1.51
CLDND1-204ENST00000394185 A2ML1A8K2U0 1454 aa24.46■■□□□ 1.51
CLDND1-204ENST00000394185 CC2D1BQ5T0F9 858 aaKnown RBP24.46■■□□□ 1.51
CLDND1-204ENST00000394185 CDCA8Q53HL2 280 aa24.46■■□□□ 1.51
CLDND1-204ENST00000394185 MYOM1P52179 1685 aa24.45■■□□□ 1.51
CLDND1-204ENST00000394185 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.5
CLDND1-204ENST00000394185 KTN1Q86UP2 1357 aaKnown RBP24.44■■□□□ 1.5
CLDND1-204ENST00000394185 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
CLDND1-204ENST00000394185 RALBP1Q15311 655 aa24.43■■□□□ 1.5
CLDND1-204ENST00000394185 KDM5AP29375 1690 aaKnown RBP24.43■■□□□ 1.5
CLDND1-204ENST00000394185 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
CLDND1-204ENST00000394185 SBNO2Q9Y2G9 1366 aa24.42■■□□□ 1.5
CLDND1-204ENST00000394185 QRICH2Q9H0J4 1663 aa24.41■■□□□ 1.5
CLDND1-204ENST00000394185 STK26Q9P289 416 aa24.41■■□□□ 1.5
CLDND1-204ENST00000394185 TMC1Q8TDI8 760 aa24.39■■□□□ 1.49
CLDND1-204ENST00000394185 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.49
CLDND1-204ENST00000394185 CEBPAP49715 358 aaPredicted RBP24.38■■□□□ 1.49
CLDND1-204ENST00000394185 RIMS2Q9UQ26 1411 aa24.38■■□□□ 1.49
CLDND1-204ENST00000394185 SAFB2Q14151 953 aaKnown RBP eCLIP24.37■■□□□ 1.49
CLDND1-204ENST00000394185 TNRQ92752 1358 aa24.37■■□□□ 1.49
CLDND1-204ENST00000394185 PNISRQ8TF01 805 aaKnown RBP24.36■■□□□ 1.49
CLDND1-204ENST00000394185 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
CLDND1-204ENST00000394185 KNSTRNQ9Y448 316 aa24.35■■□□□ 1.49
CLDND1-204ENST00000394185 SLC24A1O60721 1099 aa24.35■■□□□ 1.49
CLDND1-204ENST00000394185 AMER1Q5JTC6 1135 aaPredicted RBP24.35■■□□□ 1.49
CLDND1-204ENST00000394185 BRD4O60885 1362 aaPredicted RBP24.34■■□□□ 1.49
CLDND1-204ENST00000394185 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
CLDND1-204ENST00000394185 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.48
CLDND1-204ENST00000394185 NLRP13Q86W25 1043 aa24.32■■□□□ 1.48
CLDND1-204ENST00000394185 SENP3-EIF4A1A0A087X0R7 540 aa24.32■■□□□ 1.48
CLDND1-204ENST00000394185 YTHDC2Q9H6S0 1430 aaKnown RBP24.32■■□□□ 1.48
CLDND1-204ENST00000394185 PTPRMP28827 1452 aa24.31■■□□□ 1.48
CLDND1-204ENST00000394185 CARD14Q9BXL6 1004 aa24.31■■□□□ 1.48
CLDND1-204ENST00000394185 TULP4Q9NRJ4 1543 aa24.3■■□□□ 1.48
CLDND1-204ENST00000394185 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
CLDND1-204ENST00000394185 SLC12A5Q9H2X9 1139 aa24.28■■□□□ 1.48
CLDND1-204ENST00000394185 NRXN3Q9Y4C0 1643 aa24.25■■□□□ 1.47
CLDND1-204ENST00000394185 CABP2Q9NPB3 220 aa24.25■■□□□ 1.47
CLDND1-204ENST00000394185 UBR1Q8IWV7 1749 aa24.25■■□□□ 1.47
CLDND1-204ENST00000394185 LRPPRCP42704 1394 aaKnown RBP24.25■■□□□ 1.47
CLDND1-204ENST00000394185 SETD1AO15047 1707 aaKnown RBP24.25■■□□□ 1.47
CLDND1-204ENST00000394185 ZBED9Q6R2W3 1325 aa24.24■■□□□ 1.47
CLDND1-204ENST00000394185 C3P01024 1663 aa24.24■■□□□ 1.47
CLDND1-204ENST00000394185 EVC2Q86UK5 1308 aa24.24■■□□□ 1.47
CLDND1-204ENST00000394185 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-204ENST00000394185 FER1L4A9Z1Z3 1794 aa24.23■■□□□ 1.47
CLDND1-204ENST00000394185 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
CLDND1-204ENST00000394185 POGKQ9P215 609 aa24.22■■□□□ 1.47
CLDND1-204ENST00000394185 METP08581 1390 aa24.21■■□□□ 1.47
CLDND1-204ENST00000394185 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
CLDND1-204ENST00000394185 PPP2R1AP30153 589 aa24.2■■□□□ 1.47
CLDND1-204ENST00000394185 WAPLQ7Z5K2 1190 aa24.19■■□□□ 1.46
CLDND1-204ENST00000394185 NPC1L1Q9UHC9 1359 aa24.18■■□□□ 1.46
CLDND1-204ENST00000394185 SUPT16HQ9Y5B9 1047 aaKnown RBP24.18■■□□□ 1.46
CLDND1-204ENST00000394185 NSD3Q9BZ95 1437 aa24.18■■□□□ 1.46
CLDND1-204ENST00000394185 PLEKHH1Q9ULM0 1364 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms