RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 SYNMO15061 1565 aa27.94■■■□□ 2.06
ME3-202ENST00000393324 AGLP35573 1532 aa27.93■■■□□ 2.06
ME3-202ENST00000393324 PIK3C2BO00750 1634 aa27.92■■■□□ 2.06
ME3-202ENST00000393324 SCAF11Q99590 1463 aaKnown RBP27.9■■■□□ 2.06
ME3-202ENST00000393324 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.06
ME3-202ENST00000393324 PPLO60437 1756 aa27.89■■■□□ 2.05
ME3-202ENST00000393324 CFAP70Q5T0N1 1121 aa27.88■■■□□ 2.05
ME3-202ENST00000393324 DISP3Q9P2K9 1392 aa27.88■■■□□ 2.05
ME3-202ENST00000393324 ARHGEF40Q8TER5 1519 aa27.86■■■□□ 2.05
ME3-202ENST00000393324 RPGRIP1LQ68CZ1 1315 aa27.86■■■□□ 2.05
ME3-202ENST00000393324 TMF1P82094 1093 aa27.86■■■□□ 2.05
ME3-202ENST00000393324 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
ME3-202ENST00000393324 PREX1Q8TCU6 1659 aa27.86■■■□□ 2.05
ME3-202ENST00000393324 IDI1Q13907 227 aa27.84■■■□□ 2.05
ME3-202ENST00000393324 SLC52A1Q9NWF4 448 aa27.84■■■□□ 2.05
ME3-202ENST00000393324 CCDC184Q52MB2 194 aa27.82■■■□□ 2.04
ME3-202ENST00000393324 EIF3AQ14152 1382 aaKnown RBP27.81■■■□□ 2.04
ME3-202ENST00000393324 CNGB1Q14028 1251 aaPredicted RBP27.79■■■□□ 2.04
ME3-202ENST00000393324 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
ME3-202ENST00000393324 CLTCQ00610 1675 aaKnown RBP27.79■■■□□ 2.04
ME3-202ENST00000393324 MLECQ14165 292 aa27.78■■■□□ 2.04
ME3-202ENST00000393324 FBXO31Q5XUX0 539 aaPredicted RBP27.78■■■□□ 2.04
ME3-202ENST00000393324 MRS2Q9HD23 443 aa27.77■■■□□ 2.04
ME3-202ENST00000393324 NEXMIFQ5QGS0 1516 aa27.75■■■□□ 2.03
ME3-202ENST00000393324 ERVK-7P63135 1459 aa27.75■■■□□ 2.03
ME3-202ENST00000393324 C14orf93Q9H972 538 aaKnown RBP27.75■■■□□ 2.03
ME3-202ENST00000393324 SETBP1Q9Y6X0 1596 aa27.74■■■□□ 2.03
ME3-202ENST00000393324 VGFO15240 615 aaPredicted RBP27.73■■■□□ 2.03
ME3-202ENST00000393324 MYO5BQ9ULV0 1848 aa27.73■■■□□ 2.03
ME3-202ENST00000393324 TMEM131LA2VDJ0 1609 aa27.71■■■□□ 2.03
ME3-202ENST00000393324 NUTM2DQ5VT03 806 aaPredicted RBP27.71■■■□□ 2.03
ME3-202ENST00000393324 CDCA8Q53HL2 280 aa27.7■■■□□ 2.02
ME3-202ENST00000393324 PER1O15534 1290 aaPredicted RBP27.68■■■□□ 2.02
ME3-202ENST00000393324 PANK3Q9H999 370 aa27.67■■■□□ 2.02
ME3-202ENST00000393324 KTN1Q86UP2 1357 aaKnown RBP27.67■■■□□ 2.02
ME3-202ENST00000393324 ADGRB1O14514 1584 aa27.67■■■□□ 2.02
ME3-202ENST00000393324 SLC24A1O60721 1099 aa27.67■■■□□ 2.02
ME3-202ENST00000393324 FAM9BQ8IZU0 186 aa27.66■■■□□ 2.02
ME3-202ENST00000393324 HNRNPUQ00839 825 aaKnown RBP eCLIP27.65■■■□□ 2.02
ME3-202ENST00000393324 ZFYVE9O95405 1425 aa27.65■■■□□ 2.02
ME3-202ENST00000393324 RALBP1Q15311 655 aa27.65■■■□□ 2.02
ME3-202ENST00000393324 ESF1Q9H501 851 aaKnown RBP27.65■■■□□ 2.02
ME3-202ENST00000393324 TMEM132EQ6IEE7 984 aa27.64■■■□□ 2.02
ME3-202ENST00000393324 SPATA31D1Q6ZQQ2 1576 aa27.64■■■□□ 2.02
ME3-202ENST00000393324 MYO3AQ8NEV4 1616 aa27.64■■■□□ 2.02
ME3-202ENST00000393324 TRAK1Q9UPV9 953 aa27.63■■■□□ 2.01
ME3-202ENST00000393324 STAG3Q9UJ98 1225 aa27.61■■■□□ 2.01
ME3-202ENST00000393324 CENPJQ9HC77 1338 aaPredicted RBP27.6■■■□□ 2.01
ME3-202ENST00000393324 KDM5AP29375 1690 aaKnown RBP27.6■■■□□ 2.01
ME3-202ENST00000393324 TRHP20396 242 aaPredicted RBP27.6■■■□□ 2.01
ME3-202ENST00000393324 ZMYM3Q14202 1370 aa27.59■■■□□ 2.01
ME3-202ENST00000393324 MYBBP1AQ9BQG0 1328 aaKnown RBP27.59■■■□□ 2.01
ME3-202ENST00000393324 SBNO2Q9Y2G9 1366 aa27.59■■■□□ 2.01
ME3-202ENST00000393324 PARD3Q8TEW0 1356 aa27.57■■■□□ 2
ME3-202ENST00000393324 TMC1Q8TDI8 760 aa27.55■■■□□ 2
ME3-202ENST00000393324 MYOM1P52179 1685 aa27.55■■■□□ 2
ME3-202ENST00000393324 QRICH2Q9H0J4 1663 aa27.53■■■□□ 2
ME3-202ENST00000393324 CC2D1BQ5T0F9 858 aaKnown RBP27.53■■■□□ 2
ME3-202ENST00000393324 BRD4O60885 1362 aaPredicted RBP27.52■■■□□ 2
ME3-202ENST00000393324 A2ML1A8K2U0 1454 aa27.52■■■□□ 2
ME3-202ENST00000393324 SENP3Q9H4L4 574 aaPredicted RBP27.52■■■□□ 2
ME3-202ENST00000393324 KNSTRNQ9Y448 316 aa27.5■■□□□ 1.99
ME3-202ENST00000393324 PNISRQ8TF01 805 aaKnown RBP27.49■■□□□ 1.99
ME3-202ENST00000393324 ARHGEF28Q8N1W1 1705 aaKnown RBP27.49■■□□□ 1.99
ME3-202ENST00000393324 NLRP13Q86W25 1043 aa27.48■■□□□ 1.99
ME3-202ENST00000393324 ASXL1Q8IXJ9 1541 aa27.47■■□□□ 1.99
ME3-202ENST00000393324 RIMS2Q9UQ26 1411 aa27.44■■□□□ 1.98
ME3-202ENST00000393324 TNRQ92752 1358 aa27.43■■□□□ 1.98
ME3-202ENST00000393324 ALKQ9UM73 1620 aa27.43■■□□□ 1.98
ME3-202ENST00000393324 AMER1Q5JTC6 1135 aaPredicted RBP27.43■■□□□ 1.98
ME3-202ENST00000393324 STK26Q9P289 416 aa27.43■■□□□ 1.98
ME3-202ENST00000393324 ZBED9Q6R2W3 1325 aa27.41■■□□□ 1.98
ME3-202ENST00000393324 YTHDC2Q9H6S0 1430 aaKnown RBP27.38■■□□□ 1.97
ME3-202ENST00000393324 LRPPRCP42704 1394 aaKnown RBP27.38■■□□□ 1.97
ME3-202ENST00000393324 EVC2Q86UK5 1308 aa27.36■■□□□ 1.97
ME3-202ENST00000393324 NPC1L1Q9UHC9 1359 aa27.35■■□□□ 1.97
ME3-202ENST00000393324 SAFB2Q14151 953 aaKnown RBP eCLIP27.35■■□□□ 1.97
ME3-202ENST00000393324 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.35■■□□□ 1.97
ME3-202ENST00000393324 PTPRMP28827 1452 aa27.34■■□□□ 1.97
ME3-202ENST00000393324 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
ME3-202ENST00000393324 CARD14Q9BXL6 1004 aa27.33■■□□□ 1.97
ME3-202ENST00000393324 PUS7Q96PZ0 661 aaKnown RBP27.33■■□□□ 1.97
ME3-202ENST00000393324 CEBPAP49715 358 aaPredicted RBP27.31■■□□□ 1.96
ME3-202ENST00000393324 SLC12A5Q9H2X9 1139 aa27.31■■□□□ 1.96
ME3-202ENST00000393324 UBR1Q8IWV7 1749 aa27.31■■□□□ 1.96
ME3-202ENST00000393324 PRAM1Q96QH2 718 aa27.31■■□□□ 1.96
ME3-202ENST00000393324 SUPT16HQ9Y5B9 1047 aaKnown RBP27.31■■□□□ 1.96
ME3-202ENST00000393324 HDGFP51858 240 aaKnown RBP27.3■■□□□ 1.96
ME3-202ENST00000393324 SETD1AO15047 1707 aaKnown RBP27.3■■□□□ 1.96
ME3-202ENST00000393324 POGKQ9P215 609 aa27.29■■□□□ 1.96
ME3-202ENST00000393324 PPP2R1AP30153 589 aa27.29■■□□□ 1.96
ME3-202ENST00000393324 FER1L4A9Z1Z3 1794 aa27.29■■□□□ 1.96
ME3-202ENST00000393324 C3P01024 1663 aa27.28■■□□□ 1.96
ME3-202ENST00000393324 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
ME3-202ENST00000393324 CABP2Q9NPB3 220 aa27.26■■□□□ 1.96
ME3-202ENST00000393324 TMEM2Q9UHN6 1383 aa27.26■■□□□ 1.95
ME3-202ENST00000393324 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
ME3-202ENST00000393324 NLRP1Q9C000 1473 aa27.25■■□□□ 1.95
ME3-202ENST00000393324 MINK1Q8N4C8 1332 aaPredicted RBP27.25■■□□□ 1.95
ME3-202ENST00000393324 NSD3Q9BZ95 1437 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms