RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
CAPRIN1-202ENST00000389645 COL17A1Q9UMD9 1497 aaPredicted RBP16.24■□□□□ 0.19
CAPRIN1-202ENST00000389645 MSH5O43196 834 aa16.24■□□□□ 0.19
CAPRIN1-202ENST00000389645 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
CAPRIN1-202ENST00000389645 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
CAPRIN1-202ENST00000389645 CFAP70Q5T0N1 1121 aa16.23■□□□□ 0.19
CAPRIN1-202ENST00000389645 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
CAPRIN1-202ENST00000389645 FBXO31Q5XUX0 539 aaPredicted RBP16.21■□□□□ 0.19
CAPRIN1-202ENST00000389645 ABCC3O15438 1527 aa16.21■□□□□ 0.18
CAPRIN1-202ENST00000389645 TESK2Q96S53 571 aa16.19■□□□□ 0.18
CAPRIN1-202ENST00000389645 GPRASP1Q5JY77 1395 aa16.19■□□□□ 0.18
CAPRIN1-202ENST00000389645 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
CAPRIN1-202ENST00000389645 IDI1Q13907 227 aa16.18■□□□□ 0.18
CAPRIN1-202ENST00000389645 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
CAPRIN1-202ENST00000389645 DEKP35659 375 aaKnown RBP16.17■□□□□ 0.18
CAPRIN1-202ENST00000389645 DISP3Q9P2K9 1392 aa16.16■□□□□ 0.18
CAPRIN1-202ENST00000389645 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
CAPRIN1-202ENST00000389645 NOS1P29475 1434 aa16.15■□□□□ 0.18
CAPRIN1-202ENST00000389645 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
CAPRIN1-202ENST00000389645 MADDQ8WXG6 1647 aa16.14■□□□□ 0.17
CAPRIN1-202ENST00000389645 TMEM132EQ6IEE7 984 aa16.14■□□□□ 0.17
CAPRIN1-202ENST00000389645 NBR1Q14596 966 aa16.13■□□□□ 0.17
CAPRIN1-202ENST00000389645 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
CAPRIN1-202ENST00000389645 SIGLEC1Q9BZZ2 1709 aa16.13■□□□□ 0.17
CAPRIN1-202ENST00000389645 KIF1BO60333 1816 aa16.13■□□□□ 0.17
CAPRIN1-202ENST00000389645 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
CAPRIN1-202ENST00000389645 POLR1AO95602 1720 aaPredicted RBP16.13■□□□□ 0.17
CAPRIN1-202ENST00000389645 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
CAPRIN1-202ENST00000389645 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
CAPRIN1-202ENST00000389645 TMF1P82094 1093 aa16.11■□□□□ 0.17
CAPRIN1-202ENST00000389645 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
CAPRIN1-202ENST00000389645 STAC3Q96MF2 364 aa16.11■□□□□ 0.17
CAPRIN1-202ENST00000389645 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
CAPRIN1-202ENST00000389645 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
CAPRIN1-202ENST00000389645 PANK3Q9H999 370 aa16.09■□□□□ 0.17
CAPRIN1-202ENST00000389645 SYNMO15061 1565 aa16.08■□□□□ 0.16
CAPRIN1-202ENST00000389645 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-202ENST00000389645 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CAPRIN1-202ENST00000389645 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
CAPRIN1-202ENST00000389645 RALBP1Q15311 655 aa16.07■□□□□ 0.16
CAPRIN1-202ENST00000389645 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-202ENST00000389645 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
CAPRIN1-202ENST00000389645 ERICH6BQ5W0A0 696 aa16.06■□□□□ 0.16
CAPRIN1-202ENST00000389645 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
CAPRIN1-202ENST00000389645 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
CAPRIN1-202ENST00000389645 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
CAPRIN1-202ENST00000389645 ARHGAP31Q2M1Z3 1444 aa16.05■□□□□ 0.16
CAPRIN1-202ENST00000389645 NLRP13Q86W25 1043 aa16.05■□□□□ 0.16
CAPRIN1-202ENST00000389645 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
CAPRIN1-202ENST00000389645 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
CAPRIN1-202ENST00000389645 PER1O15534 1290 aaPredicted RBP16.04■□□□□ 0.16
CAPRIN1-202ENST00000389645 CDCA7LQ96GN5 454 aa16.04■□□□□ 0.16
CAPRIN1-202ENST00000389645 MYOM2P54296 1465 aa16.04■□□□□ 0.16
CAPRIN1-202ENST00000389645 STK26Q9P289 416 aa16.03■□□□□ 0.16
CAPRIN1-202ENST00000389645 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
CAPRIN1-202ENST00000389645 LAMC1P11047 1609 aa16.03■□□□□ 0.16
CAPRIN1-202ENST00000389645 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
CAPRIN1-202ENST00000389645 PLIN1O60240 522 aa16.03■□□□□ 0.16
CAPRIN1-202ENST00000389645 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.16
CAPRIN1-202ENST00000389645 RCAN3Q9UKA8 241 aa16.02■□□□□ 0.15
CAPRIN1-202ENST00000389645 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAPRIN1-202ENST00000389645 EXOC6Q8TAG9 804 aa16■□□□□ 0.15
CAPRIN1-202ENST00000389645 IQGAP1P46940 1657 aa16■□□□□ 0.15
CAPRIN1-202ENST00000389645 IFT172Q9UG01 1749 aa16■□□□□ 0.15
CAPRIN1-202ENST00000389645 PIK3C2GO75747 1445 aa16■□□□□ 0.15
CAPRIN1-202ENST00000389645 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
CAPRIN1-202ENST00000389645 CLTCQ00610 1675 aaKnown RBP16■□□□□ 0.15
CAPRIN1-202ENST00000389645 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
CAPRIN1-202ENST00000389645 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
CAPRIN1-202ENST00000389645 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
CAPRIN1-202ENST00000389645 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
CAPRIN1-202ENST00000389645 ANP32AP39687 249 aaKnown RBP15.99■□□□□ 0.15
CAPRIN1-202ENST00000389645 CEBPAP49715 358 aaPredicted RBP15.99■□□□□ 0.15
CAPRIN1-202ENST00000389645 PPLO60437 1756 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 PIK3C2BO00750 1634 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 AGLP35573 1532 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 ERVK-7P63135 1459 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 ZMYM3Q14202 1370 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 IL27Q8NEV9 243 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
CAPRIN1-202ENST00000389645 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
CAPRIN1-202ENST00000389645 CENPJQ9HC77 1338 aaPredicted RBP15.97■□□□□ 0.15
CAPRIN1-202ENST00000389645 ARHGEF40Q8TER5 1519 aa15.97■□□□□ 0.15
CAPRIN1-202ENST00000389645 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
CAPRIN1-202ENST00000389645 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
CAPRIN1-202ENST00000389645 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
CAPRIN1-202ENST00000389645 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
CAPRIN1-202ENST00000389645 CDCA8Q53HL2 280 aa15.95■□□□□ 0.14
CAPRIN1-202ENST00000389645 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
CAPRIN1-202ENST00000389645 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
CAPRIN1-202ENST00000389645 REREQ9P2R6 1566 aa15.94■□□□□ 0.14
CAPRIN1-202ENST00000389645 KIAA1210Q9ULL0 1709 aa15.94■□□□□ 0.14
CAPRIN1-202ENST00000389645 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
CAPRIN1-202ENST00000389645 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
CAPRIN1-202ENST00000389645 TMEM131LA2VDJ0 1609 aa15.93■□□□□ 0.14
CAPRIN1-202ENST00000389645 ADGRB1O14514 1584 aa15.91■□□□□ 0.14
CAPRIN1-202ENST00000389645 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
CAPRIN1-202ENST00000389645 ADAMTS8Q9UP79 889 aa15.91■□□□□ 0.14
CAPRIN1-202ENST00000389645 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
CAPRIN1-202ENST00000389645 SKAP1Q86WV1 359 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms