RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 SF3A1Q15459 793 aaKnown RBP22.54■■□□□ 1.2
SSC5D-201ENST00000389623 RIPK4P57078 832 aa22.53■■□□□ 1.2
SSC5D-201ENST00000389623 NASPP49321 788 aaPredicted RBP22.53■■□□□ 1.2
SSC5D-201ENST00000389623 BECN2A8MW95 431 aa22.52■■□□□ 1.2
SSC5D-201ENST00000389623 MCTP1Q6DN14 999 aa22.52■■□□□ 1.2
SSC5D-201ENST00000389623 GORABQ5T7V8 394 aa22.51■■□□□ 1.19
SSC5D-201ENST00000389623 GOLGA6L1Q8N7Z2 621 aa22.5■■□□□ 1.19
SSC5D-201ENST00000389623 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
SSC5D-201ENST00000389623 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SSC5D-201ENST00000389623 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
SSC5D-201ENST00000389623 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
SSC5D-201ENST00000389623 INTS3Q68E01 1043 aaKnown RBP22.49■■□□□ 1.19
SSC5D-201ENST00000389623 H3BQV1 296 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 PDE3AQ14432 1141 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 IFFO2Q5TF58 517 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 AMPHP49418 695 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
SSC5D-201ENST00000389623 ANO2Q9NQ90 1003 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 STAC3Q96MF2 364 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 NPHP1O15259 732 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 CHMP3Q9Y3E7 222 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 FAM184AQ8NB25 1140 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 DIAPH3Q9NSV4 1193 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 PDZRN3Q9UPQ7 1066 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 R3HCC1Q9Y3T6 440 aaKnown RBP22.46■■□□□ 1.19
SSC5D-201ENST00000389623 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 MAP7D2Q96T17 732 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 PPP2R1AP30153 589 aa22.44■■□□□ 1.18
SSC5D-201ENST00000389623 ZNF771Q7L3S4 317 aaPredicted RBP22.44■■□□□ 1.18
SSC5D-201ENST00000389623 ZNF592Q92610 1267 aa22.44■■□□□ 1.18
SSC5D-201ENST00000389623 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
SSC5D-201ENST00000389623 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 RUFY2Q8WXA3 655 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 CDC45O75419 566 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 COG3Q96JB2 828 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
SSC5D-201ENST00000389623 ROCK1Q13464 1354 aa22.42■■□□□ 1.18
SSC5D-201ENST00000389623 MTERF4Q7Z6M4 381 aaKnown RBP22.41■■□□□ 1.18
SSC5D-201ENST00000389623 ZNF330Q9Y3S2 320 aaPredicted RBP22.41■■□□□ 1.18
SSC5D-201ENST00000389623 TPM2P07951 284 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 TPM3P06753 285 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 MINK1Q8N4C8 1332 aaPredicted RBP22.4■■□□□ 1.18
SSC5D-201ENST00000389623 CHMP4CQ96CF2 233 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 RNF214Q8ND24 703 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
SSC5D-201ENST00000389623 ISY1Q9ULR0 285 aaKnown RBP22.4■■□□□ 1.18
SSC5D-201ENST00000389623 HFM1A2PYH4 1435 aa22.39■■□□□ 1.18
SSC5D-201ENST00000389623 GNAI1P63096 354 aa22.39■■□□□ 1.18
SSC5D-201ENST00000389623 CCDC39Q9UFE4 941 aa22.39■■□□□ 1.17
SSC5D-201ENST00000389623 BCAR3O75815 825 aa22.39■■□□□ 1.17
SSC5D-201ENST00000389623 CAVIN1Q6NZI2 390 aaKnown RBP22.38■■□□□ 1.17
SSC5D-201ENST00000389623 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
SSC5D-201ENST00000389623 SMC3Q9UQE7 1217 aa22.37■■□□□ 1.17
SSC5D-201ENST00000389623 TAF7LQ5H9L4 462 aa22.37■■□□□ 1.17
SSC5D-201ENST00000389623 VPS37CA5D8V6 355 aaPredicted RBP22.37■■□□□ 1.17
SSC5D-201ENST00000389623 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 MTHFSP49914 203 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 CCAR2Q8N163 923 aaKnown RBP22.36■■□□□ 1.17
SSC5D-201ENST00000389623 BICD2Q8TD16 824 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 MBD3O95983 291 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 CREBRFQ8IUR6 639 aa22.35■■□□□ 1.17
SSC5D-201ENST00000389623 CCDC173Q0VFZ6 552 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 NOC3LQ8WTT2 800 aaKnown RBP22.34■■□□□ 1.17
SSC5D-201ENST00000389623 PTPRGP23470 1445 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 NBPF1Q3BBV0 1214 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 CFTRP13569 1480 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
SSC5D-201ENST00000389623 MCM4P33991 863 aa22.32■■□□□ 1.16
SSC5D-201ENST00000389623 RASSF8Q8NHQ8 419 aa22.32■■□□□ 1.16
SSC5D-201ENST00000389623 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
SSC5D-201ENST00000389623 FKBP5Q13451 457 aaPredicted RBP22.32■■□□□ 1.16
SSC5D-201ENST00000389623 GRPEL1Q9HAV7 217 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 GPS2Q13227 327 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 IFT57Q9NWB7 429 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 RABEP1Q15276 862 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
SSC5D-201ENST00000389623 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
SSC5D-201ENST00000389623 SYNJ1O43426 1573 aa22.3■■□□□ 1.16
SSC5D-201ENST00000389623 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 SASS6Q6UVJ0 657 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 TOMM22Q9NS69 142 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 PRPF40AO75400 957 aaKnown RBP22.29■■□□□ 1.16
SSC5D-201ENST00000389623 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 ESPNB1AK53 854 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 C9orf78Q9NZ63 289 aaPredicted RBP22.29■■□□□ 1.16
SSC5D-201ENST00000389623 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
SSC5D-201ENST00000389623 HMOX1P09601 288 aa22.28■■□□□ 1.16
SSC5D-201ENST00000389623 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.28■■□□□ 1.16
SSC5D-201ENST00000389623 NEK4P51957 841 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 TEFQ10587 303 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 KIAA1107Q9UPP5 1409 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 HMGN5P82970 282 aaKnown RBP22.26■■□□□ 1.15
SSC5D-201ENST00000389623 CPLX2Q6PUV4 134 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms