RNA–Protein interactions for RNA: ENST00000389302.7

FANCA-203, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-203ENST00000389302 RIMS2Q9UQ26 1411 aa24.48■■□□□ 1.51
FANCA-203ENST00000389302 SLIT1O75093 1534 aa24.48■■□□□ 1.51
FANCA-203ENST00000389302 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.47■■□□□ 1.51
FANCA-203ENST00000389302 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
FANCA-203ENST00000389302 ARHGAP23Q9P227 1491 aa24.47■■□□□ 1.51
FANCA-203ENST00000389302 SPATA31E1Q6ZUB1 1445 aa24.47■■□□□ 1.51
FANCA-203ENST00000389302 RPGRIP1LQ68CZ1 1315 aa24.45■■□□□ 1.51
FANCA-203ENST00000389302 BCANQ96GW7 911 aa24.45■■□□□ 1.5
FANCA-203ENST00000389302 STRCQ7RTU9 1775 aa24.43■■□□□ 1.5
FANCA-203ENST00000389302 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
FANCA-203ENST00000389302 SCAF11Q99590 1463 aaKnown RBP24.43■■□□□ 1.5
FANCA-203ENST00000389302 DMRT2Q9Y5R5 561 aa24.43■■□□□ 1.5
FANCA-203ENST00000389302 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
FANCA-203ENST00000389302 DCAF11Q8TEB1 546 aa24.39■■□□□ 1.5
FANCA-203ENST00000389302 KDM2AQ9Y2K7 1162 aa24.39■■□□□ 1.5
FANCA-203ENST00000389302 CLSPNQ9HAW4 1339 aa24.39■■□□□ 1.49
FANCA-203ENST00000389302 NEURL4Q96JN8 1562 aa24.38■■□□□ 1.49
FANCA-203ENST00000389302 POLR1AO95602 1720 aaPredicted RBP24.38■■□□□ 1.49
FANCA-203ENST00000389302 NEXMIFQ5QGS0 1516 aa24.38■■□□□ 1.49
FANCA-203ENST00000389302 NPHP4O75161 1426 aaPredicted RBP24.37■■□□□ 1.49
FANCA-203ENST00000389302 MED14O60244 1454 aa24.36■■□□□ 1.49
FANCA-203ENST00000389302 L3MBTL2Q969R5 705 aa24.34■■□□□ 1.49
FANCA-203ENST00000389302 SLC26A8Q96RN1 970 aa24.34■■□□□ 1.49
FANCA-203ENST00000389302 PLEKHG1Q9ULL1 1385 aa24.34■■□□□ 1.49
FANCA-203ENST00000389302 ADGRF5Q8IZF2 1346 aa24.33■■□□□ 1.49
FANCA-203ENST00000389302 PPLO60437 1756 aa24.32■■□□□ 1.48
FANCA-203ENST00000389302 ILDR1Q86SU0 546 aaPredicted RBP24.31■■□□□ 1.48
FANCA-203ENST00000389302 IQGAP1P46940 1657 aa24.3■■□□□ 1.48
FANCA-203ENST00000389302 TONSLQ96HA7 1378 aa24.3■■□□□ 1.48
FANCA-203ENST00000389302 STAC3Q96MF2 364 aa24.29■■□□□ 1.48
FANCA-203ENST00000389302 IFT172Q9UG01 1749 aa24.28■■□□□ 1.48
FANCA-203ENST00000389302 TBX22Q9Y458 520 aa24.26■■□□□ 1.47
FANCA-203ENST00000389302 MYOM2P54296 1465 aa24.23■■□□□ 1.47
FANCA-203ENST00000389302 ADAMTS13Q76LX8 1427 aa24.23■■□□□ 1.47
FANCA-203ENST00000389302 SETBP1Q9Y6X0 1596 aa24.21■■□□□ 1.47
FANCA-203ENST00000389302 CFAP70Q5T0N1 1121 aa24.21■■□□□ 1.47
FANCA-203ENST00000389302 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
FANCA-203ENST00000389302 PIK3C2GO75747 1445 aa24.19■■□□□ 1.46
FANCA-203ENST00000389302 C14orf93Q9H972 538 aaKnown RBP24.19■■□□□ 1.46
FANCA-203ENST00000389302 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
FANCA-203ENST00000389302 NRXN1Q9ULB1 1477 aa24.19■■□□□ 1.46
FANCA-203ENST00000389302 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
FANCA-203ENST00000389302 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
FANCA-203ENST00000389302 METP08581 1390 aa24.16■■□□□ 1.46
FANCA-203ENST00000389302 TMEM132EQ6IEE7 984 aa24.16■■□□□ 1.46
FANCA-203ENST00000389302 KCNA6P17658 529 aa24.14■■□□□ 1.46
FANCA-203ENST00000389302 DIP2AQ14689 1571 aa24.14■■□□□ 1.46
FANCA-203ENST00000389302 PRAG1Q86YV5 1406 aa24.14■■□□□ 1.45
FANCA-203ENST00000389302 AMOTL2Q9Y2J4 779 aa24.13■■□□□ 1.45
FANCA-203ENST00000389302 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
FANCA-203ENST00000389302 PIK3R4Q99570 1358 aa24.11■■□□□ 1.45
FANCA-203ENST00000389302 STK26Q9P289 416 aa24.1■■□□□ 1.45
FANCA-203ENST00000389302 NBPF1Q3BBV0 1214 aa24.08■■□□□ 1.45
FANCA-203ENST00000389302 PTPRUQ92729 1446 aa24.08■■□□□ 1.45
FANCA-203ENST00000389302 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
FANCA-203ENST00000389302 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
FANCA-203ENST00000389302 CHD2O14647 1828 aaKnown RBP24.06■■□□□ 1.44
FANCA-203ENST00000389302 LAMC1P11047 1609 aa24.05■■□□□ 1.44
FANCA-203ENST00000389302 STRCP1A6NGW2 1772 aa24.04■■□□□ 1.44
FANCA-203ENST00000389302 RBM33Q96EV2 1170 aaKnown RBP24.03■■□□□ 1.44
FANCA-203ENST00000389302 LTBP4Q8N2S1 1624 aa24.02■■□□□ 1.44
FANCA-203ENST00000389302 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
FANCA-203ENST00000389302 LRPPRCP42704 1394 aaKnown RBP24.01■■□□□ 1.43
FANCA-203ENST00000389302 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
FANCA-203ENST00000389302 TRAK1Q9UPV9 953 aa24.01■■□□□ 1.43
FANCA-203ENST00000389302 ROCK2O75116 1388 aaKnown RBP24■■□□□ 1.43
FANCA-203ENST00000389302 CPS1P31327 1500 aa24■■□□□ 1.43
FANCA-203ENST00000389302 KIAA1210Q9ULL0 1709 aa23.99■■□□□ 1.43
FANCA-203ENST00000389302 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
FANCA-203ENST00000389302 ABCC11Q96J66 1382 aa23.99■■□□□ 1.43
FANCA-203ENST00000389302 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
FANCA-203ENST00000389302 TRPM1Q7Z4N2 1603 aa23.98■■□□□ 1.43
FANCA-203ENST00000389302 FBXO41Q8TF61 875 aa23.97■■□□□ 1.43
FANCA-203ENST00000389302 NKTRP30414 1462 aaKnown RBP23.97■■□□□ 1.43
FANCA-203ENST00000389302 WAPLQ7Z5K2 1190 aa23.96■■□□□ 1.43
FANCA-203ENST00000389302 CERKQ8TCT0 537 aa23.96■■□□□ 1.43
FANCA-203ENST00000389302 TMEM94Q12767 1356 aa23.96■■□□□ 1.43
FANCA-203ENST00000389302 ROBO2Q9HCK4 1378 aa23.96■■□□□ 1.43
FANCA-203ENST00000389302 XRN1Q8IZH2 1706 aaKnown RBP23.96■■□□□ 1.43
FANCA-203ENST00000389302 LRRC7Q96NW7 1537 aa23.96■■□□□ 1.43
FANCA-203ENST00000389302 C14orf37Q86TY3 774 aa23.95■■□□□ 1.43
FANCA-203ENST00000389302 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.43
FANCA-203ENST00000389302 POGKQ9P215 609 aa23.94■■□□□ 1.42
FANCA-203ENST00000389302 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
FANCA-203ENST00000389302 SAFB2Q14151 953 aaKnown RBP eCLIP23.92■■□□□ 1.42
FANCA-203ENST00000389302 SIRT1Q96EB6 747 aa23.92■■□□□ 1.42
FANCA-203ENST00000389302 PRAM1Q96QH2 718 aa23.92■■□□□ 1.42
FANCA-203ENST00000389302 RALGAPBQ86X10 1494 aa23.92■■□□□ 1.42
FANCA-203ENST00000389302 TECPR2O15040 1411 aa23.91■■□□□ 1.42
FANCA-203ENST00000389302 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
FANCA-203ENST00000389302 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.41
FANCA-203ENST00000389302 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.41
FANCA-203ENST00000389302 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
FANCA-203ENST00000389302 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
FANCA-203ENST00000389302 C19orf44Q9H6X5 657 aa23.86■■□□□ 1.41
FANCA-203ENST00000389302 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
FANCA-203ENST00000389302 DLC1Q96QB1 1528 aa23.85■■□□□ 1.41
FANCA-203ENST00000389302 XIRP1Q702N8 1843 aaKnown RBP23.84■■□□□ 1.41
FANCA-203ENST00000389302 MSH6P52701 1360 aa23.84■■□□□ 1.41
FANCA-203ENST00000389302 ATF3P18847 181 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms