RNA–Protein interactions for RNA: ENST00000389302.7

FANCA-203, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-203ENST00000389302 NISCHQ9Y2I1 1504 aa40.01■■■■■ 4
FANCA-203ENST00000389302 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
FANCA-203ENST00000389302 ABCC9O60706 1549 aa34.33■■■■□ 3.09
FANCA-203ENST00000389302 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
FANCA-203ENST00000389302 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
FANCA-203ENST00000389302 NACADO15069 1562 aa33.16■■■□□ 2.9
FANCA-203ENST00000389302 RB1CC1Q8TDY2 1594 aa33.11■■■□□ 2.89
FANCA-203ENST00000389302 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
FANCA-203ENST00000389302 MYO15BQ96JP2 1530 aa33.04■■■□□ 2.88
FANCA-203ENST00000389302 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
FANCA-203ENST00000389302 UNC13AQ9UPW8 1703 aa32.34■■■□□ 2.77
FANCA-203ENST00000389302 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.752e-8■□□□□ 10
FANCA-203ENST00000389302 BICRAQ9NZM4 1560 aa32.08■■■□□ 2.73
FANCA-203ENST00000389302 SHROOM4Q9ULL8 1493 aa32.01■■■□□ 2.71
FANCA-203ENST00000389302 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
FANCA-203ENST00000389302 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
FANCA-203ENST00000389302 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
FANCA-203ENST00000389302 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
FANCA-203ENST00000389302 BAZ1AQ9NRL2 1556 aaPredicted RBP30.97■■■□□ 2.55
FANCA-203ENST00000389302 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
FANCA-203ENST00000389302 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
FANCA-203ENST00000389302 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.51
FANCA-203ENST00000389302 SMARCA2P51531 1590 aa30.67■■■□□ 2.5
FANCA-203ENST00000389302 RSF1Q96T23 1441 aaPredicted RBP30.66■■■□□ 2.5
FANCA-203ENST00000389302 NCAPD3P42695 1498 aa30.62■■■□□ 2.49
FANCA-203ENST00000389302 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
FANCA-203ENST00000389302 WIZO95785 1651 aa30.56■■■□□ 2.48
FANCA-203ENST00000389302 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
FANCA-203ENST00000389302 HMGXB3Q12766 1538 aa30.45■■■□□ 2.47
FANCA-203ENST00000389302 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
FANCA-203ENST00000389302 TOP2AP11388 1531 aaKnown RBP30.21■■■□□ 2.43
FANCA-203ENST00000389302 CCDC88BA6NC98 1476 aa29.92■■■□□ 2.38
FANCA-203ENST00000389302 NESP48681 1621 aa29.81■■■□□ 2.36
FANCA-203ENST00000389302 CADPSQ9ULU8 1353 aa29.79■■■□□ 2.36
FANCA-203ENST00000389302 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
FANCA-203ENST00000389302 CFTRP13569 1480 aa29.65■■■□□ 2.34
FANCA-203ENST00000389302 PDS5BQ9NTI5 1447 aa29.57■■■□□ 2.32
FANCA-203ENST00000389302 ERCC6Q03468 1493 aa29.56■■■□□ 2.32
FANCA-203ENST00000389302 FANCD2Q9BXW9 1451 aa29.44■■■□□ 2.3
FANCA-203ENST00000389302 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
FANCA-203ENST00000389302 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
FANCA-203ENST00000389302 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
FANCA-203ENST00000389302 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
FANCA-203ENST00000389302 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
FANCA-203ENST00000389302 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
FANCA-203ENST00000389302 WDR62O43379 1518 aa29.06■■■□□ 2.24
FANCA-203ENST00000389302 CUX2O14529 1486 aa29.02■■■□□ 2.24
FANCA-203ENST00000389302 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
FANCA-203ENST00000389302 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
FANCA-203ENST00000389302 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
FANCA-203ENST00000389302 CUX1P39880 1505 aa28.92■■■□□ 2.22
FANCA-203ENST00000389302 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
FANCA-203ENST00000389302 SYNJ1O43426 1573 aa28.78■■■□□ 2.2
FANCA-203ENST00000389302 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
FANCA-203ENST00000389302 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
FANCA-203ENST00000389302 TOP2BQ02880 1626 aa28.75■■■□□ 2.19
FANCA-203ENST00000389302 SOGA1O94964 1423 aa28.73■■■□□ 2.19
FANCA-203ENST00000389302 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
FANCA-203ENST00000389302 IFT140Q96RY7 1462 aa28.71■■■□□ 2.19
FANCA-203ENST00000389302 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.18
FANCA-203ENST00000389302 TRIM41Q8WV44 630 aa28.62■■■□□ 2.17
FANCA-203ENST00000389302 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
FANCA-203ENST00000389302 ZNF608Q9ULD9 1512 aaPredicted RBP28.57■■■□□ 2.16
FANCA-203ENST00000389302 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
FANCA-203ENST00000389302 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
FANCA-203ENST00000389302 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.155e-10■■■□□ 18.1
FANCA-203ENST00000389302 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
FANCA-203ENST00000389302 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
FANCA-203ENST00000389302 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
FANCA-203ENST00000389302 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
FANCA-203ENST00000389302 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
FANCA-203ENST00000389302 ABCA5Q8WWZ7 1642 aa28.3■■■□□ 2.12
FANCA-203ENST00000389302 GRIN2BQ13224 1484 aa28.29■■■□□ 2.12
FANCA-203ENST00000389302 KIF27Q86VH2 1401 aa28.28■■■□□ 2.12
FANCA-203ENST00000389302 PBRM1Q86U86 1689 aa28.21■■■□□ 2.11
FANCA-203ENST00000389302 SNAPC4Q5SXM2 1469 aa28.2■■■□□ 2.11
FANCA-203ENST00000389302 FBLN2P98095 1184 aa28.2■■■□□ 2.1
FANCA-203ENST00000389302 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
FANCA-203ENST00000389302 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
FANCA-203ENST00000389302 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
FANCA-203ENST00000389302 IGF1RP08069 1367 aa28.14■■■□□ 2.1
FANCA-203ENST00000389302 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
FANCA-203ENST00000389302 FAM9AQ8IZU1 332 aaPredicted RBP28.07■■■□□ 2.08
FANCA-203ENST00000389302 SYNJ2O15056 1496 aa28.05■■■□□ 2.08
FANCA-203ENST00000389302 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
FANCA-203ENST00000389302 OSCARQ8IYS5 282 aa28.03■■■□□ 2.08
FANCA-203ENST00000389302 ADAMTS12P58397 1594 aa28■■■□□ 2.07
FANCA-203ENST00000389302 CHD1O14646 1710 aa28■■■□□ 2.07
FANCA-203ENST00000389302 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
FANCA-203ENST00000389302 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
FANCA-203ENST00000389302 EEA1Q15075 1411 aa27.96■■■□□ 2.07
FANCA-203ENST00000389302 CUL7Q14999 1698 aa27.95■■■□□ 2.06
FANCA-203ENST00000389302 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
FANCA-203ENST00000389302 RAPGEF2Q9Y4G8 1499 aa27.83■■■□□ 2.05
FANCA-203ENST00000389302 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
FANCA-203ENST00000389302 NUP160Q12769 1436 aa27.76■■■□□ 2.03
FANCA-203ENST00000389302 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
FANCA-203ENST00000389302 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
FANCA-203ENST00000389302 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
FANCA-203ENST00000389302 KIAA0586Q9BVV6 1533 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms