RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 FOXD4L3Q6VB84 417 aaPredicted RBP9.83□□□□□ -0.84
NCBP3-201ENST00000389005 ATP6V1DQ9Y5K8 247 aa9.83□□□□□ -0.84
NCBP3-201ENST00000389005 TPM4P67936 248 aa9.83□□□□□ -0.84
NCBP3-201ENST00000389005 HSP90B1P14625 803 aaKnown RBP9.83□□□□□ -0.84
NCBP3-201ENST00000389005 RILPL2Q969X0 211 aa9.83□□□□□ -0.84
NCBP3-201ENST00000389005 API5Q9BZZ5 524 aaKnown RBP9.83□□□□□ -0.84
NCBP3-201ENST00000389005 NUCB2P80303 420 aa9.82□□□□□ -0.84
NCBP3-201ENST00000389005 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
NCBP3-201ENST00000389005 PTPRGP23470 1445 aa9.82□□□□□ -0.84
NCBP3-201ENST00000389005 RIPK4P57078 832 aa9.82□□□□□ -0.84
NCBP3-201ENST00000389005 FAM13BQ9NYF5 915 aa9.82□□□□□ -0.84
NCBP3-201ENST00000389005 PPP2R1AP30153 589 aa9.82□□□□□ -0.84
NCBP3-201ENST00000389005 TOP2BQ02880 1626 aa9.81□□□□□ -0.84
NCBP3-201ENST00000389005 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
NCBP3-201ENST00000389005 VGFO15240 615 aaPredicted RBP9.81□□□□□ -0.84
NCBP3-201ENST00000389005 PDE3AQ14432 1141 aa9.81□□□□□ -0.84
NCBP3-201ENST00000389005 EFCAB5A4FU69 1503 aa9.8□□□□□ -0.84
NCBP3-201ENST00000389005 PRDM2Q13029 1718 aa9.8□□□□□ -0.84
NCBP3-201ENST00000389005 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
NCBP3-201ENST00000389005 DIAPH1O60610 1272 aaKnown RBP9.8□□□□□ -0.84
NCBP3-201ENST00000389005 TRAK2O60296 914 aa9.8□□□□□ -0.84
NCBP3-201ENST00000389005 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
NCBP3-201ENST00000389005 COG3Q96JB2 828 aa9.79□□□□□ -0.84
NCBP3-201ENST00000389005 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
NCBP3-201ENST00000389005 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
NCBP3-201ENST00000389005 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
NCBP3-201ENST00000389005 KIAA1107Q9UPP5 1409 aa9.79□□□□□ -0.84
NCBP3-201ENST00000389005 INTS3Q68E01 1043 aaKnown RBP9.79□□□□□ -0.84
NCBP3-201ENST00000389005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.79□□□□□ -0.84
NCBP3-201ENST00000389005 TCP11L2Q8N4U5 519 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
NCBP3-201ENST00000389005 ROCK1Q13464 1354 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 AMPHP49418 695 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 CCDC34Q96HJ3 373 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 TULP1O00294 542 aaPredicted RBP9.78□□□□□ -0.84
NCBP3-201ENST00000389005 CDC45O75419 566 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 TNNT3P45378 269 aaPredicted RBP9.78□□□□□ -0.84
NCBP3-201ENST00000389005 MCTP1Q6DN14 999 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 DIAPH3Q9NSV4 1193 aa9.78□□□□□ -0.84
NCBP3-201ENST00000389005 ANO2Q9NQ90 1003 aa9.77□□□□□ -0.84
NCBP3-201ENST00000389005 NAIPQ13075 1403 aa9.77□□□□□ -0.85
NCBP3-201ENST00000389005 H3BQV1 296 aa9.77□□□□□ -0.85
NCBP3-201ENST00000389005 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
NCBP3-201ENST00000389005 GOLGA6L19H0YKK7 550 aa9.77□□□□□ -0.85
NCBP3-201ENST00000389005 SF3A1Q15459 793 aaKnown RBP9.77□□□□□ -0.85
NCBP3-201ENST00000389005 CHMP3Q9Y3E7 222 aa9.77□□□□□ -0.85
NCBP3-201ENST00000389005 BECN2A8MW95 431 aa9.76□□□□□ -0.85
NCBP3-201ENST00000389005 GORABQ5T7V8 394 aa9.76□□□□□ -0.85
NCBP3-201ENST00000389005 GNAI1P63096 354 aa9.76□□□□□ -0.85
NCBP3-201ENST00000389005 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
NCBP3-201ENST00000389005 NPHP1O15259 732 aa9.76□□□□□ -0.85
NCBP3-201ENST00000389005 NGDNQ8NEJ9 315 aaKnown RBP9.76□□□□□ -0.85
NCBP3-201ENST00000389005 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
NCBP3-201ENST00000389005 BCAR3O75815 825 aa9.75□□□□□ -0.85
NCBP3-201ENST00000389005 ZKSCAN1P17029 563 aaPredicted RBP9.75□□□□□ -0.85
NCBP3-201ENST00000389005 NINLQ9Y2I6 1382 aa9.75□□□□□ -0.85
NCBP3-201ENST00000389005 MTHFSP49914 203 aa9.75□□□□□ -0.85
NCBP3-201ENST00000389005 ISY1Q9ULR0 285 aaKnown RBP9.74□□□□□ -0.85
NCBP3-201ENST00000389005 FAM184AQ8NB25 1140 aa9.74□□□□□ -0.85
NCBP3-201ENST00000389005 NUTM2FA1L443 756 aa9.74□□□□□ -0.85
NCBP3-201ENST00000389005 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
NCBP3-201ENST00000389005 CCDC39Q9UFE4 941 aa9.74□□□□□ -0.85
NCBP3-201ENST00000389005 CAVIN1Q6NZI2 390 aaKnown RBP9.73□□□□□ -0.85
NCBP3-201ENST00000389005 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
NCBP3-201ENST00000389005 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 GOLGA6L1Q8N7Z2 621 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 MAP7D2Q96T17 732 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
NCBP3-201ENST00000389005 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 TPM2P07951 284 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 ZNF592Q92610 1267 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 RABEP1Q15276 862 aa9.73□□□□□ -0.85
NCBP3-201ENST00000389005 MBD3O95983 291 aa9.72□□□□□ -0.85
NCBP3-201ENST00000389005 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
NCBP3-201ENST00000389005 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
NCBP3-201ENST00000389005 VPS37CA5D8V6 355 aaPredicted RBP9.72□□□□□ -0.85
NCBP3-201ENST00000389005 CHMP4CQ96CF2 233 aa9.72□□□□□ -0.85
NCBP3-201ENST00000389005 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.85
NCBP3-201ENST00000389005 TAF7LQ5H9L4 462 aa9.72□□□□□ -0.85
NCBP3-201ENST00000389005 MTERF4Q7Z6M4 381 aaKnown RBP9.72□□□□□ -0.85
NCBP3-201ENST00000389005 SMC3Q9UQE7 1217 aa9.72□□□□□ -0.85
NCBP3-201ENST00000389005 C11orf95C9JLR9 678 aaPredicted RBP9.71□□□□□ -0.85
NCBP3-201ENST00000389005 HMOX1P09601 288 aa9.71□□□□□ -0.85
NCBP3-201ENST00000389005 FKBP5Q13451 457 aaPredicted RBP9.71□□□□□ -0.85
NCBP3-201ENST00000389005 MCM4P33991 863 aa9.71□□□□□ -0.85
NCBP3-201ENST00000389005 EXOSC9Q06265 439 aaKnown RBP9.71□□□□□ -0.85
NCBP3-201ENST00000389005 CCDC173Q0VFZ6 552 aa9.71□□□□□ -0.85
NCBP3-201ENST00000389005 SCAPERQ9BY12 1400 aa9.71□□□□□ -0.85
NCBP3-201ENST00000389005 TPM3P06753 285 aa9.71□□□□□ -0.86
NCBP3-201ENST00000389005 BICD2Q8TD16 824 aa9.71□□□□□ -0.86
NCBP3-201ENST00000389005 GRPEL1Q9HAV7 217 aa9.71□□□□□ -0.86
NCBP3-201ENST00000389005 ZNF771Q7L3S4 317 aaPredicted RBP9.7□□□□□ -0.86
NCBP3-201ENST00000389005 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
NCBP3-201ENST00000389005 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.7□□□□□ -0.86
NCBP3-201ENST00000389005 CABP2Q9NPB3 220 aa9.7□□□□□ -0.86
NCBP3-201ENST00000389005 TSR2Q969E8 191 aaKnown RBP9.7□□□□□ -0.86
NCBP3-201ENST00000389005 ERBINQ96RT1 1412 aa9.7□□□□□ -0.86
NCBP3-201ENST00000389005 DAPK1P53355 1430 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms