RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TMEM2Q9UHN6 1383 aa23.9■■□□□ 1.42
SNRPB-201ENST00000381342 LTKP29376 864 aa23.89■■□□□ 1.41
SNRPB-201ENST00000381342 IQGAP1P46940 1657 aa23.89■■□□□ 1.41
SNRPB-201ENST00000381342 ARHGAP23Q9P227 1491 aa23.88■■□□□ 1.41
SNRPB-201ENST00000381342 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
SNRPB-201ENST00000381342 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
SNRPB-201ENST00000381342 BCANQ96GW7 911 aa23.87■■□□□ 1.41
SNRPB-201ENST00000381342 CPS1P31327 1500 aa23.87■■□□□ 1.41
SNRPB-201ENST00000381342 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
SNRPB-201ENST00000381342 PPP1R15AO75807 674 aaPredicted RBP23.82■■□□□ 1.4
SNRPB-201ENST00000381342 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
SNRPB-201ENST00000381342 TOM1O60784 492 aa23.8■■□□□ 1.4
SNRPB-201ENST00000381342 ZFYVE9O95405 1425 aa23.8■■□□□ 1.4
SNRPB-201ENST00000381342 RIMS2Q9UQ26 1411 aa23.79■■□□□ 1.4
SNRPB-201ENST00000381342 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
SNRPB-201ENST00000381342 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
SNRPB-201ENST00000381342 NEXMIFQ5QGS0 1516 aa23.77■■□□□ 1.4
SNRPB-201ENST00000381342 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
SNRPB-201ENST00000381342 PPLO60437 1756 aa23.75■■□□□ 1.39
SNRPB-201ENST00000381342 IFT172Q9UG01 1749 aa23.74■■□□□ 1.39
SNRPB-201ENST00000381342 SLC26A8Q96RN1 970 aa23.74■■□□□ 1.39
SNRPB-201ENST00000381342 DHX57Q6P158 1386 aaKnown RBP23.74■■□□□ 1.39
SNRPB-201ENST00000381342 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
SNRPB-201ENST00000381342 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
SNRPB-201ENST00000381342 PIP4K2BP78356 416 aa23.71■■□□□ 1.39
SNRPB-201ENST00000381342 KCNA6P17658 529 aa23.69■■□□□ 1.38
SNRPB-201ENST00000381342 NUTM2DQ5VT03 806 aaPredicted RBP23.69■■□□□ 1.38
SNRPB-201ENST00000381342 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
SNRPB-201ENST00000381342 PLEKHG1Q9ULL1 1385 aa23.67■■□□□ 1.38
SNRPB-201ENST00000381342 LRRC7Q96NW7 1537 aa23.67■■□□□ 1.38
SNRPB-201ENST00000381342 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
SNRPB-201ENST00000381342 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
SNRPB-201ENST00000381342 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
SNRPB-201ENST00000381342 TBX22Q9Y458 520 aa23.63■■□□□ 1.37
SNRPB-201ENST00000381342 SETBP1Q9Y6X0 1596 aa23.63■■□□□ 1.37
SNRPB-201ENST00000381342 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
SNRPB-201ENST00000381342 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
SNRPB-201ENST00000381342 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
SNRPB-201ENST00000381342 SETD1AO15047 1707 aaKnown RBP23.59■■□□□ 1.37
SNRPB-201ENST00000381342 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
SNRPB-201ENST00000381342 TMEM94Q12767 1356 aa23.56■■□□□ 1.36
SNRPB-201ENST00000381342 MYOM2P54296 1465 aa23.56■■□□□ 1.36
SNRPB-201ENST00000381342 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
SNRPB-201ENST00000381342 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
SNRPB-201ENST00000381342 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
SNRPB-201ENST00000381342 HSPA1LP34931 641 aa23.53■■□□□ 1.36
SNRPB-201ENST00000381342 PIK3R4Q99570 1358 aa23.52■■□□□ 1.36
SNRPB-201ENST00000381342 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.36
SNRPB-201ENST00000381342 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
SNRPB-201ENST00000381342 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
SNRPB-201ENST00000381342 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
SNRPB-201ENST00000381342 C14orf37Q86TY3 774 aa23.51■■□□□ 1.35
SNRPB-201ENST00000381342 RBM33Q96EV2 1170 aaKnown RBP23.51■■□□□ 1.35
SNRPB-201ENST00000381342 MSH6P52701 1360 aa23.51■■□□□ 1.35
SNRPB-201ENST00000381342 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
SNRPB-201ENST00000381342 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
SNRPB-201ENST00000381342 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
SNRPB-201ENST00000381342 LAMC1P11047 1609 aa23.48■■□□□ 1.35
SNRPB-201ENST00000381342 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
SNRPB-201ENST00000381342 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
SNRPB-201ENST00000381342 AMOTL2Q9Y2J4 779 aa23.47■■□□□ 1.35
SNRPB-201ENST00000381342 DCAF11Q8TEB1 546 aa23.45■■□□□ 1.34
SNRPB-201ENST00000381342 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
SNRPB-201ENST00000381342 ASXL1Q8IXJ9 1541 aa23.44■■□□□ 1.34
SNRPB-201ENST00000381342 PTPRUQ92729 1446 aa23.44■■□□□ 1.34
SNRPB-201ENST00000381342 METP08581 1390 aa23.44■■□□□ 1.34
SNRPB-201ENST00000381342 KDM2AQ9Y2K7 1162 aa23.43■■□□□ 1.34
SNRPB-201ENST00000381342 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
SNRPB-201ENST00000381342 ATF3P18847 181 aa23.4■■□□□ 1.34
SNRPB-201ENST00000381342 C19orf44Q9H6X5 657 aa23.39■■□□□ 1.33
SNRPB-201ENST00000381342 SLAIN2Q9P270 581 aa23.39■■□□□ 1.33
SNRPB-201ENST00000381342 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.33
SNRPB-201ENST00000381342 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
SNRPB-201ENST00000381342 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
SNRPB-201ENST00000381342 KNDC1Q76NI1 1749 aa23.36■■□□□ 1.33
SNRPB-201ENST00000381342 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
SNRPB-201ENST00000381342 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
SNRPB-201ENST00000381342 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
SNRPB-201ENST00000381342 TONSLQ96HA7 1378 aa23.35■■□□□ 1.33
SNRPB-201ENST00000381342 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
SNRPB-201ENST00000381342 CFAP70Q5T0N1 1121 aa23.33■■□□□ 1.33
SNRPB-201ENST00000381342 STAC3Q96MF2 364 aa23.33■■□□□ 1.33
SNRPB-201ENST00000381342 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.32
SNRPB-201ENST00000381342 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
SNRPB-201ENST00000381342 TRPM1Q7Z4N2 1603 aa23.31■■□□□ 1.32
SNRPB-201ENST00000381342 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
SNRPB-201ENST00000381342 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
SNRPB-201ENST00000381342 NALCNQ8IZF0 1738 aa23.29■■□□□ 1.32
SNRPB-201ENST00000381342 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
SNRPB-201ENST00000381342 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
SNRPB-201ENST00000381342 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.32
SNRPB-201ENST00000381342 ROBO1Q9Y6N7 1651 aa23.27■■□□□ 1.32
SNRPB-201ENST00000381342 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
SNRPB-201ENST00000381342 TECPR2O15040 1411 aa23.26■■□□□ 1.31
SNRPB-201ENST00000381342 STK26Q9P289 416 aa23.25■■□□□ 1.31
SNRPB-201ENST00000381342 ARHGEF28Q8N1W1 1705 aaKnown RBP23.24■■□□□ 1.31
SNRPB-201ENST00000381342 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
SNRPB-201ENST00000381342 DCCP43146 1447 aa23.23■■□□□ 1.31
SNRPB-201ENST00000381342 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
SNRPB-201ENST00000381342 MED1Q15648 1581 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms