RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 SPATA31D1Q6ZQQ2 1576 aa11.39□□□□□ -0.59
FAM49A-201ENST00000381323 RPRD2Q5VT52 1461 aaKnown RBP11.39□□□□□ -0.59
FAM49A-201ENST00000381323 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
FAM49A-201ENST00000381323 CEP152O94986 1710 aa11.39□□□□□ -0.59
FAM49A-201ENST00000381323 SOCS7O14512 581 aa11.38□□□□□ -0.59
FAM49A-201ENST00000381323 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
FAM49A-201ENST00000381323 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
FAM49A-201ENST00000381323 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
FAM49A-201ENST00000381323 PRDM15P57071 1507 aaPredicted RBP11.37□□□□□ -0.59
FAM49A-201ENST00000381323 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
FAM49A-201ENST00000381323 CCDC144AA2RUR9 1427 aa11.37□□□□□ -0.59
FAM49A-201ENST00000381323 MPHOSPH9Q99550 1183 aa11.36□□□□□ -0.59
FAM49A-201ENST00000381323 A0A0G2JS52 829 aa11.35□□□□□ -0.59
FAM49A-201ENST00000381323 MYT1Q01538 1121 aa11.35□□□□□ -0.59
FAM49A-201ENST00000381323 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
FAM49A-201ENST00000381323 ZNF142P52746 1687 aaPredicted RBP11.35□□□□□ -0.59
FAM49A-201ENST00000381323 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.59
FAM49A-201ENST00000381323 NOS1P29475 1434 aa11.34□□□□□ -0.59
FAM49A-201ENST00000381323 MED14O60244 1454 aa11.34□□□□□ -0.59
FAM49A-201ENST00000381323 RPGRIP1LQ68CZ1 1315 aa11.34□□□□□ -0.59
FAM49A-201ENST00000381323 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.59
FAM49A-201ENST00000381323 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
FAM49A-201ENST00000381323 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
FAM49A-201ENST00000381323 NGLY1Q96IV0 654 aa11.33□□□□□ -0.6
FAM49A-201ENST00000381323 LRRC59Q96AG4 307 aaKnown RBP11.32□□□□□ -0.6
FAM49A-201ENST00000381323 CCDC9Q9Y3X0 531 aaKnown RBP11.32□□□□□ -0.6
FAM49A-201ENST00000381323 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
FAM49A-201ENST00000381323 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
FAM49A-201ENST00000381323 LMTK2Q8IWU2 1503 aa11.31□□□□□ -0.6
FAM49A-201ENST00000381323 ADGRB3O60242 1522 aa11.31□□□□□ -0.6
FAM49A-201ENST00000381323 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
FAM49A-201ENST00000381323 ZNF772Q68DY9 489 aaPredicted RBP11.3□□□□□ -0.6
FAM49A-201ENST00000381323 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
FAM49A-201ENST00000381323 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
FAM49A-201ENST00000381323 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
FAM49A-201ENST00000381323 POLR1AO95602 1720 aaPredicted RBP11.3□□□□□ -0.6
FAM49A-201ENST00000381323 RRBP1Q9P2E9 1410 aaKnown RBP11.3□□□□□ -0.6
FAM49A-201ENST00000381323 JCADQ9P266 1359 aa11.3□□□□□ -0.6
FAM49A-201ENST00000381323 SLIT1O75093 1534 aa11.3□□□□□ -0.6
FAM49A-201ENST00000381323 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
FAM49A-201ENST00000381323 DEPDC5O75140 1603 aa11.28□□□□□ -0.6
FAM49A-201ENST00000381323 NAIPQ13075 1403 aa11.28□□□□□ -0.6
FAM49A-201ENST00000381323 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
FAM49A-201ENST00000381323 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
FAM49A-201ENST00000381323 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.6
FAM49A-201ENST00000381323 TET3O43151 1660 aa11.27□□□□□ -0.61
FAM49A-201ENST00000381323 HFM1A2PYH4 1435 aa11.27□□□□□ -0.61
FAM49A-201ENST00000381323 FAM135BQ49AJ0 1406 aa11.27□□□□□ -0.61
FAM49A-201ENST00000381323 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.61
FAM49A-201ENST00000381323 NEURL4Q96JN8 1562 aa11.26□□□□□ -0.61
FAM49A-201ENST00000381323 NKTRP30414 1462 aaKnown RBP11.26□□□□□ -0.61
FAM49A-201ENST00000381323 PSME1Q06323 249 aa11.26□□□□□ -0.61
FAM49A-201ENST00000381323 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
FAM49A-201ENST00000381323 DHX57Q6P158 1386 aaKnown RBP11.25□□□□□ -0.61
FAM49A-201ENST00000381323 ANKRD30BQ9BXX2 1392 aa11.25□□□□□ -0.61
FAM49A-201ENST00000381323 UBR1Q8IWV7 1749 aa11.25□□□□□ -0.61
FAM49A-201ENST00000381323 RXRBP28702 533 aa11.25□□□□□ -0.61
FAM49A-201ENST00000381323 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
FAM49A-201ENST00000381323 XPCQ01831 940 aaPredicted RBP11.25□□□□□ -0.61
FAM49A-201ENST00000381323 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
FAM49A-201ENST00000381323 FOXO3O43524 673 aa11.24□□□□□ -0.61
FAM49A-201ENST00000381323 SPATA31A6Q5VVP1 1343 aa11.24□□□□□ -0.61
FAM49A-201ENST00000381323 VWDEQ8N2E2 1590 aa11.24□□□□□ -0.61
FAM49A-201ENST00000381323 NPHP3Q7Z494 1330 aa11.24□□□□□ -0.61
FAM49A-201ENST00000381323 BRINP3Q76B58 766 aa11.24□□□□□ -0.61
FAM49A-201ENST00000381323 TRAK1Q9UPV9 953 aa11.24□□□□□ -0.61
FAM49A-201ENST00000381323 LRPPRCP42704 1394 aaKnown RBP11.24□□□□□ -0.61
FAM49A-201ENST00000381323 TRPM2O94759 1503 aa11.23□□□□□ -0.61
FAM49A-201ENST00000381323 ZBTB7CA1YPR0 619 aa11.22□□□□□ -0.61
FAM49A-201ENST00000381323 SYNMO15061 1565 aa11.22□□□□□ -0.61
FAM49A-201ENST00000381323 WAPLQ7Z5K2 1190 aa11.22□□□□□ -0.61
FAM49A-201ENST00000381323 DDX17Q92841 729 aaKnown RBP11.21□□□□□ -0.61
FAM49A-201ENST00000381323 SF3B2Q13435 895 aaKnown RBP11.21□□□□□ -0.62
FAM49A-201ENST00000381323 RAB3GAP2Q9H2M9 1393 aa11.21□□□□□ -0.62
FAM49A-201ENST00000381323 METP08581 1390 aa11.21□□□□□ -0.62
FAM49A-201ENST00000381323 ZFYVE9O95405 1425 aa11.21□□□□□ -0.62
FAM49A-201ENST00000381323 CFAP70Q5T0N1 1121 aa11.2□□□□□ -0.62
FAM49A-201ENST00000381323 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
FAM49A-201ENST00000381323 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
FAM49A-201ENST00000381323 ORAI2Q96SN7 254 aa11.2□□□□□ -0.62
FAM49A-201ENST00000381323 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
FAM49A-201ENST00000381323 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
FAM49A-201ENST00000381323 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
FAM49A-201ENST00000381323 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
FAM49A-201ENST00000381323 UNC13BO14795 1591 aa11.19□□□□□ -0.62
FAM49A-201ENST00000381323 AFF2P51816 1311 aa11.18□□□□□ -0.62
FAM49A-201ENST00000381323 USP21Q9UK80 565 aa11.18□□□□□ -0.62
FAM49A-201ENST00000381323 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
FAM49A-201ENST00000381323 IQGAP3Q86VI3 1631 aa11.18□□□□□ -0.62
FAM49A-201ENST00000381323 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
FAM49A-201ENST00000381323 GCC2Q8IWJ2 1684 aa11.18□□□□□ -0.62
FAM49A-201ENST00000381323 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
FAM49A-201ENST00000381323 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
FAM49A-201ENST00000381323 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
FAM49A-201ENST00000381323 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
FAM49A-201ENST00000381323 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
FAM49A-201ENST00000381323 POTEAQ6S8J7 498 aa11.15□□□□□ -0.62
FAM49A-201ENST00000381323 TRPC5Q9UL62 973 aaPredicted RBP11.15□□□□□ -0.62
FAM49A-201ENST00000381323 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
FAM49A-201ENST00000381323 MED1Q15648 1581 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms