RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 EXOC5O00471 708 aa8.42□□□□□ -1.06
NEDD9-202ENST00000379446 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-202ENST00000379446 CASKIN1Q8WXD9 1431 aa8.42□□□□□ -1.06
NEDD9-202ENST00000379446 RAD21O60216 631 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 ZNF772Q68DY9 489 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-202ENST00000379446 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 TRIM34Q9BYJ4 488 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 USP21Q9UK80 565 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
NEDD9-202ENST00000379446 CCDC144AA2RUR9 1427 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 ADGRL1O94910 1474 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 GRIN2AQ12879 1464 aa8.41□□□□□ -1.06
NEDD9-202ENST00000379446 ROCK2O75116 1388 aaKnown RBP8.41□□□□□ -1.06
NEDD9-202ENST00000379446 WDHD1O75717 1129 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-202ENST00000379446 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-202ENST00000379446 PRAM1Q96QH2 718 aa8.4□□□□□ -1.06
NEDD9-202ENST00000379446 QTRT2Q9H974 415 aaKnown RBP8.4□□□□□ -1.06
NEDD9-202ENST00000379446 STK32BQ9NY57 414 aa8.4□□□□□ -1.06
NEDD9-202ENST00000379446 EIF3AQ14152 1382 aaKnown RBP8.4□□□□□ -1.06
NEDD9-202ENST00000379446 KRT28Q7Z3Y7 464 aa8.4□□□□□ -1.06
NEDD9-202ENST00000379446 ZNF526Q8TF50 670 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-202ENST00000379446 CTDP1Q9Y5B0 961 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-202ENST00000379446 KIAA0586Q9BVV6 1533 aa8.4□□□□□ -1.07
NEDD9-202ENST00000379446 CLSTN1O94985 981 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 PHF14O94880 888 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 TFCP2L1Q9NZI6 479 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 FYCO1Q9BQS8 1478 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 TNRQ92752 1358 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 NCOA2Q15596 1464 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 CCDC184Q52MB2 194 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 VPS37DQ86XT2 251 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 STK31Q9BXU1 1019 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
NEDD9-202ENST00000379446 URB2Q14146 1524 aaKnown RBP8.38□□□□□ -1.07
NEDD9-202ENST00000379446 EIF2S2P20042 333 aaKnown RBP8.38□□□□□ -1.07
NEDD9-202ENST00000379446 MYOM3Q5VTT5 1437 aa8.38□□□□□ -1.07
NEDD9-202ENST00000379446 AK7Q96M32 723 aa8.38□□□□□ -1.07
NEDD9-202ENST00000379446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEDD9-202ENST00000379446 APBA3O96018 575 aa8.38□□□□□ -1.07
NEDD9-202ENST00000379446 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
NEDD9-202ENST00000379446 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
NEDD9-202ENST00000379446 ILDR1Q86SU0 546 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-202ENST00000379446 CHMP4AQ9BY43 222 aa8.37□□□□□ -1.07
NEDD9-202ENST00000379446 KRI1Q8N9T8 703 aaKnown RBP8.37□□□□□ -1.07
NEDD9-202ENST00000379446 DNMBPQ6XZF7 1577 aa8.37□□□□□ -1.07
NEDD9-202ENST00000379446 LRPPRCP42704 1394 aaKnown RBP8.37□□□□□ -1.07
NEDD9-202ENST00000379446 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-202ENST00000379446 C19orf44Q9H6X5 657 aa8.37□□□□□ -1.07
NEDD9-202ENST00000379446 FAM135AQ9P2D6 1515 aa8.36□□□□□ -1.07
NEDD9-202ENST00000379446 KAT6BQ8WYB5 2073 aa8.36□□□□□ -1.07
NEDD9-202ENST00000379446 PTPRKQ15262 1439 aa8.36□□□□□ -1.07
NEDD9-202ENST00000379446 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
NEDD9-202ENST00000379446 ACSBG1Q96GR2 724 aa8.36□□□□□ -1.07
NEDD9-202ENST00000379446 MPRIPQ6WCQ1 1025 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
NEDD9-202ENST00000379446 CABLES1Q8TDN4 633 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 FBXO41Q8TF61 875 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 PRKRIP1Q9H875 184 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-202ENST00000379446 NAP1L2Q9ULW6 460 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-202ENST00000379446 ZPR1O75312 459 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 RRP7AQ9Y3A4 280 aaKnown RBP8.35□□□□□ -1.07
NEDD9-202ENST00000379446 HFM1A2PYH4 1435 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 NAIPQ13075 1403 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 MAP3K1Q13233 1512 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 IDI1Q13907 227 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
NEDD9-202ENST00000379446 CABP4P57796 275 aa8.34□□□□□ -1.07
NEDD9-202ENST00000379446 ZNF622Q969S3 477 aaKnown RBP eCLIP8.34□□□□□ -1.07
NEDD9-202ENST00000379446 NOL10Q9BSC4 688 aaKnown RBP8.34□□□□□ -1.07
NEDD9-202ENST00000379446 FGD1P98174 961 aa8.34□□□□□ -1.07
NEDD9-202ENST00000379446 DDB1Q16531 1140 aa8.34□□□□□ -1.07
NEDD9-202ENST00000379446 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
NEDD9-202ENST00000379446 CDK19Q9BWU1 502 aa8.34□□□□□ -1.07
NEDD9-202ENST00000379446 FANCAO15360 1455 aa8.34□□□□□ -1.07
NEDD9-202ENST00000379446 FAM98CQ17RN3 349 aaKnown RBP8.33□□□□□ -1.08
NEDD9-202ENST00000379446 WAPLQ7Z5K2 1190 aa8.33□□□□□ -1.08
NEDD9-202ENST00000379446 FRAT1Q92837 279 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-202ENST00000379446 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-202ENST00000379446 ZNF335Q9H4Z2 1342 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-202ENST00000379446 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
NEDD9-202ENST00000379446 SLC4A10Q6U841 1118 aa8.33□□□□□ -1.08
NEDD9-202ENST00000379446 CENPJQ9HC77 1338 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-202ENST00000379446 MYCNP04198 464 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-202ENST00000379446 EFCAB5A4FU69 1503 aa8.32□□□□□ -1.08
NEDD9-202ENST00000379446 HSP90AA1P07900 732 aaKnown RBP8.32□□□□□ -1.08
NEDD9-202ENST00000379446 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
NEDD9-202ENST00000379446 RBM5P52756 815 aaKnown RBP eCLIP8.32□□□□□ -1.081e-19■■■■■ 58.1
NEDD9-202ENST00000379446 TRPC5Q9UL62 973 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-202ENST00000379446 APBB1O00213 710 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 AIMP1Q12904 312 aaKnown RBP8.31□□□□□ -1.08
NEDD9-202ENST00000379446 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
NEDD9-202ENST00000379446 NEXNQ0ZGT2 675 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 ARHGEF11O15085 1522 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 GGNBP2Q9H3C7 697 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 SPG7Q9UQ90 795 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 CCDC7Q96M83 1385 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
NEDD9-202ENST00000379446 PLEKHO1Q53GL0 409 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms