RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 HDGFP51858 240 aaKnown RBP34.2■■■■□ 3.07
RPP38-201ENST00000378197 HRCP23327 699 aa34.18■■■■□ 3.06
RPP38-201ENST00000378197 KIF1BO60333 1816 aa34.17■■■■□ 3.06
RPP38-201ENST00000378197 PPP1R15AO75807 674 aaPredicted RBP34.17■■■■□ 3.06
RPP38-201ENST00000378197 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.17■■■■□ 3.06
RPP38-201ENST00000378197 NUTM2DQ5VT03 806 aaPredicted RBP34.14■■■■□ 3.06
RPP38-201ENST00000378197 PLEKHG1Q9ULL1 1385 aa34.14■■■■□ 3.06
RPP38-201ENST00000378197 ZNF326Q5BKZ1 582 aaKnown RBP34.14■■■■□ 3.06
RPP38-201ENST00000378197 BCANQ96GW7 911 aa34.11■■■■□ 3.05
RPP38-201ENST00000378197 SLC26A8Q96RN1 970 aa34.11■■■■□ 3.05
RPP38-201ENST00000378197 SENP3Q9H4L4 574 aaPredicted RBP34.11■■■■□ 3.05
RPP38-201ENST00000378197 CPS1P31327 1500 aa34.1■■■■□ 3.05
RPP38-201ENST00000378197 ILDR1Q86SU0 546 aaPredicted RBP34.1■■■■□ 3.05
RPP38-201ENST00000378197 FBXO41Q8TF61 875 aa34.1■■■■□ 3.05
RPP38-201ENST00000378197 CCDC144AA2RUR9 1427 aa34.1■■■■□ 3.05
RPP38-201ENST00000378197 STRCP1A6NGW2 1772 aa34.08■■■■□ 3.05
RPP38-201ENST00000378197 IQSEC2Q5JU85 1478 aa34.07■■■■□ 3.04
RPP38-201ENST00000378197 NEXMIFQ5QGS0 1516 aa34.05■■■■□ 3.04
RPP38-201ENST00000378197 ADAMTS13Q76LX8 1427 aa33.98■■■■□ 3.03
RPP38-201ENST00000378197 TBX22Q9Y458 520 aa33.96■■■■□ 3.03
RPP38-201ENST00000378197 TRIM26Q12899 539 aaPredicted RBP33.95■■■■□ 3.03
RPP38-201ENST00000378197 SPATA31E1Q6ZUB1 1445 aa33.95■■■■□ 3.03
RPP38-201ENST00000378197 DIP2AQ14689 1571 aa33.95■■■■□ 3.03
RPP38-201ENST00000378197 KCNA6P17658 529 aa33.95■■■■□ 3.02
RPP38-201ENST00000378197 RPGRIP1LQ68CZ1 1315 aa33.95■■■■□ 3.02
RPP38-201ENST00000378197 LRRC7Q96NW7 1537 aa33.95■■■■□ 3.02
RPP38-201ENST00000378197 NRXN3Q9Y4C0 1643 aa33.93■■■■□ 3.02
RPP38-201ENST00000378197 SETBP1Q9Y6X0 1596 aa33.93■■■■□ 3.02
RPP38-201ENST00000378197 ANKRD30BQ9BXX2 1392 aa33.93■■■■□ 3.02
RPP38-201ENST00000378197 PPLO60437 1756 aa33.91■■■■□ 3.02
RPP38-201ENST00000378197 RGL3Q3MIN7 710 aa33.91■■■■□ 3.02
RPP38-201ENST00000378197 NWD1Q149M9 1564 aa33.91■■■■□ 3.02
RPP38-201ENST00000378197 VGFO15240 615 aaPredicted RBP33.89■■■■□ 3.02
RPP38-201ENST00000378197 CHD2O14647 1828 aaKnown RBP33.88■■■■□ 3.01
RPP38-201ENST00000378197 NKTRP30414 1462 aaKnown RBP33.85■■■■□ 3.01
RPP38-201ENST00000378197 PIK3R4Q99570 1358 aa33.84■■■■□ 3.01
RPP38-201ENST00000378197 UBAP1LF5GYI3 381 aa33.83■■■■□ 3.01
RPP38-201ENST00000378197 IFT172Q9UG01 1749 aa33.83■■■■□ 3.01
RPP38-201ENST00000378197 XIRP1Q702N8 1843 aaKnown RBP33.81■■■■□ 3
RPP38-201ENST00000378197 PROSER2Q86WR7 435 aaPredicted RBP33.8■■■■□ 3
RPP38-201ENST00000378197 TMEM94Q12767 1356 aa33.78■■■■□ 3
RPP38-201ENST00000378197 PTPRUQ92729 1446 aa33.78■■■■□ 3
RPP38-201ENST00000378197 METP08581 1390 aa33.77■■■■□ 3
RPP38-201ENST00000378197 ADGRF5Q8IZF2 1346 aa33.76■■■■□ 3
RPP38-201ENST00000378197 RBM33Q96EV2 1170 aaKnown RBP33.76■■■□□ 2.99
RPP38-201ENST00000378197 AMOTL2Q9Y2J4 779 aa33.75■■■□□ 2.99
RPP38-201ENST00000378197 ALKQ9UM73 1620 aa33.74■■■□□ 2.99
RPP38-201ENST00000378197 TOM1O60784 492 aa33.74■■■□□ 2.99
RPP38-201ENST00000378197 SETD1AO15047 1707 aaKnown RBP33.73■■■□□ 2.99
RPP38-201ENST00000378197 XRN1Q8IZH2 1706 aaKnown RBP33.71■■■□□ 2.99
RPP38-201ENST00000378197 MYOM2P54296 1465 aa33.67■■■□□ 2.98
RPP38-201ENST00000378197 PIK3C2GO75747 1445 aa33.66■■■□□ 2.98
RPP38-201ENST00000378197 PIP4K2BP78356 416 aa33.63■■■□□ 2.97
RPP38-201ENST00000378197 SCAF1Q9H7N4 1312 aaKnown RBP33.63■■■□□ 2.97
RPP38-201ENST00000378197 NRXN1Q9ULB1 1477 aa33.62■■■□□ 2.97
RPP38-201ENST00000378197 NCOA3Q9Y6Q9 1424 aa33.61■■■□□ 2.97
RPP38-201ENST00000378197 DHX57Q6P158 1386 aaKnown RBP33.61■■■□□ 2.97
RPP38-201ENST00000378197 MSH6P52701 1360 aa33.6■■■□□ 2.97
RPP38-201ENST00000378197 C14orf37Q86TY3 774 aa33.57■■■□□ 2.97
RPP38-201ENST00000378197 DCAF11Q8TEB1 546 aa33.57■■■□□ 2.97
RPP38-201ENST00000378197 KDM2AQ9Y2K7 1162 aa33.55■■■□□ 2.96
RPP38-201ENST00000378197 ASXL1Q8IXJ9 1541 aa33.54■■■□□ 2.96
RPP38-201ENST00000378197 C14orf93Q9H972 538 aaKnown RBP33.53■■■□□ 2.96
RPP38-201ENST00000378197 PTCH1Q13635 1447 aa33.53■■■□□ 2.96
RPP38-201ENST00000378197 PRAG1Q86YV5 1406 aa33.52■■■□□ 2.96
RPP38-201ENST00000378197 LAMC1P11047 1609 aa33.52■■■□□ 2.96
RPP38-201ENST00000378197 CFAP70Q5T0N1 1121 aa33.5■■■□□ 2.95
RPP38-201ENST00000378197 TMEM132EQ6IEE7 984 aa33.5■■■□□ 2.95
RPP38-201ENST00000378197 STAC3Q96MF2 364 aa33.5■■■□□ 2.95
RPP38-201ENST00000378197 ROBO2Q9HCK4 1378 aa33.5■■■□□ 2.95
RPP38-201ENST00000378197 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.5■■■□□ 2.95
RPP38-201ENST00000378197 C19orf44Q9H6X5 657 aa33.5■■■□□ 2.95
RPP38-201ENST00000378197 SIN3AQ96ST3 1273 aa33.48■■■□□ 2.95
RPP38-201ENST00000378197 LRPPRCP42704 1394 aaKnown RBP33.46■■■□□ 2.95
RPP38-201ENST00000378197 STK26Q9P289 416 aa33.45■■■□□ 2.95
RPP38-201ENST00000378197 PCGF6Q9BYE7 350 aa33.44■■■□□ 2.94
RPP38-201ENST00000378197 YTHDC2Q9H6S0 1430 aaKnown RBP33.43■■■□□ 2.94
RPP38-201ENST00000378197 ADGRL3Q9HAR2 1447 aa33.43■■■□□ 2.94
RPP38-201ENST00000378197 NALCNQ8IZF0 1738 aa33.43■■■□□ 2.94
RPP38-201ENST00000378197 TECPR2O15040 1411 aa33.43■■■□□ 2.94
RPP38-201ENST00000378197 ATF3P18847 181 aa33.43■■■□□ 2.94
RPP38-201ENST00000378197 CADPS2Q86UW7 1296 aa33.43■■■□□ 2.94
RPP38-201ENST00000378197 HSPA1LP34931 641 aa33.42■■■□□ 2.94
RPP38-201ENST00000378197 SLAIN2Q9P270 581 aa33.42■■■□□ 2.94
RPP38-201ENST00000378197 ABCC11Q96J66 1382 aa33.42■■■□□ 2.94
RPP38-201ENST00000378197 KNDC1Q76NI1 1749 aa33.42■■■□□ 2.94
RPP38-201ENST00000378197 FAM135BQ49AJ0 1406 aa33.41■■■□□ 2.94
RPP38-201ENST00000378197 NEUROD1Q13562 356 aa33.41■■■□□ 2.94
RPP38-201ENST00000378197 DCCP43146 1447 aa33.4■■■□□ 2.94
RPP38-201ENST00000378197 ROBO1Q9Y6N7 1651 aa33.39■■■□□ 2.94
RPP38-201ENST00000378197 ADGRB1O14514 1584 aa33.36■■■□□ 2.93
RPP38-201ENST00000378197 L3MBTL2Q969R5 705 aa33.34■■■□□ 2.93
RPP38-201ENST00000378197 WAPLQ7Z5K2 1190 aa33.33■■■□□ 2.93
RPP38-201ENST00000378197 PLEKHH1Q9ULM0 1364 aa33.3■■■□□ 2.92
RPP38-201ENST00000378197 MST1RQ04912 1400 aa33.3■■■□□ 2.92
RPP38-201ENST00000378197 SIRT1Q96EB6 747 aa33.29■■■□□ 2.92
RPP38-201ENST00000378197 KIAA1210Q9ULL0 1709 aa33.26■■■□□ 2.92
RPP38-201ENST00000378197 DLC1Q96QB1 1528 aa33.26■■■□□ 2.91
RPP38-201ENST00000378197 TRAK1Q9UPV9 953 aa33.24■■■□□ 2.91
RPP38-201ENST00000378197 CDC42BPGQ6DT37 1551 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms