RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 CLSPNQ9HAW4 1339 aa32.62■■■□□ 2.81
CBWD1-203ENST00000377400 NCKAP5LQ9HCH0 1330 aa32.62■■■□□ 2.81
CBWD1-203ENST00000377400 SLIT1O75093 1534 aa32.61■■■□□ 2.81
CBWD1-203ENST00000377400 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.6■■■□□ 2.81
CBWD1-203ENST00000377400 BCANQ96GW7 911 aa32.59■■■□□ 2.81
CBWD1-203ENST00000377400 SENP3Q9H4L4 574 aaPredicted RBP32.59■■■□□ 2.81
CBWD1-203ENST00000377400 ARHGAP23Q9P227 1491 aa32.59■■■□□ 2.81
CBWD1-203ENST00000377400 RPGRIP1LQ68CZ1 1315 aa32.58■■■□□ 2.81
CBWD1-203ENST00000377400 LTKP29376 864 aa32.58■■■□□ 2.81
CBWD1-203ENST00000377400 SCAF11Q99590 1463 aaKnown RBP32.57■■■□□ 2.8
CBWD1-203ENST00000377400 NEURL4Q96JN8 1562 aa32.56■■■□□ 2.8
CBWD1-203ENST00000377400 ZFYVE9O95405 1425 aa32.55■■■□□ 2.8
CBWD1-203ENST00000377400 DCAF11Q8TEB1 546 aa32.54■■■□□ 2.8
CBWD1-203ENST00000377400 NEXMIFQ5QGS0 1516 aa32.53■■■□□ 2.8
CBWD1-203ENST00000377400 VGFO15240 615 aaPredicted RBP32.53■■■□□ 2.8
CBWD1-203ENST00000377400 KDM2AQ9Y2K7 1162 aa32.53■■■□□ 2.8
CBWD1-203ENST00000377400 TONSLQ96HA7 1378 aa32.52■■■□□ 2.8
CBWD1-203ENST00000377400 POLR1AO95602 1720 aaPredicted RBP32.51■■■□□ 2.8
CBWD1-203ENST00000377400 PPLO60437 1756 aa32.47■■■□□ 2.79
CBWD1-203ENST00000377400 STRCQ7RTU9 1775 aa32.46■■■□□ 2.79
CBWD1-203ENST00000377400 NPHP4O75161 1426 aaPredicted RBP32.46■■■□□ 2.79
CBWD1-203ENST00000377400 L3MBTL2Q969R5 705 aa32.46■■■□□ 2.79
CBWD1-203ENST00000377400 DMRT2Q9Y5R5 561 aa32.45■■■□□ 2.79
CBWD1-203ENST00000377400 PLEKHG1Q9ULL1 1385 aa32.43■■■□□ 2.78
CBWD1-203ENST00000377400 ADGRF5Q8IZF2 1346 aa32.42■■■□□ 2.78
CBWD1-203ENST00000377400 IFT172Q9UG01 1749 aa32.41■■■□□ 2.78
CBWD1-203ENST00000377400 MED14O60244 1454 aa32.41■■■□□ 2.78
CBWD1-203ENST00000377400 IQGAP1P46940 1657 aa32.4■■■□□ 2.78
CBWD1-203ENST00000377400 SLC26A8Q96RN1 970 aa32.39■■■□□ 2.78
CBWD1-203ENST00000377400 STAC3Q96MF2 364 aa32.38■■■□□ 2.77
CBWD1-203ENST00000377400 MYOM2P54296 1465 aa32.37■■■□□ 2.77
CBWD1-203ENST00000377400 TIMELESSQ9UNS1 1208 aa32.3■■■□□ 2.76
CBWD1-203ENST00000377400 PIK3C2GO75747 1445 aa32.3■■■□□ 2.76
CBWD1-203ENST00000377400 SETBP1Q9Y6X0 1596 aa32.29■■■□□ 2.76
CBWD1-203ENST00000377400 NRXN1Q9ULB1 1477 aa32.27■■■□□ 2.76
CBWD1-203ENST00000377400 ADAMTS13Q76LX8 1427 aa32.26■■■□□ 2.76
CBWD1-203ENST00000377400 TBX22Q9Y458 520 aa32.26■■■□□ 2.75
CBWD1-203ENST00000377400 NRXN3Q9Y4C0 1643 aa32.25■■■□□ 2.75
CBWD1-203ENST00000377400 CFAP70Q5T0N1 1121 aa32.24■■■□□ 2.75
CBWD1-203ENST00000377400 DIP2AQ14689 1571 aa32.23■■■□□ 2.75
CBWD1-203ENST00000377400 PRAG1Q86YV5 1406 aa32.23■■■□□ 2.75
CBWD1-203ENST00000377400 ALKQ9UM73 1620 aa32.23■■■□□ 2.75
CBWD1-203ENST00000377400 C14orf93Q9H972 538 aaKnown RBP32.21■■■□□ 2.75
CBWD1-203ENST00000377400 METP08581 1390 aa32.17■■■□□ 2.74
CBWD1-203ENST00000377400 TMEM132EQ6IEE7 984 aa32.17■■■□□ 2.74
CBWD1-203ENST00000377400 ZNF335Q9H4Z2 1342 aaPredicted RBP32.16■■■□□ 2.74
CBWD1-203ENST00000377400 LAMC1P11047 1609 aa32.16■■■□□ 2.74
CBWD1-203ENST00000377400 NBPF8Q3BBV2 869 aa32.14■■■□□ 2.74
CBWD1-203ENST00000377400 PIK3R4Q99570 1358 aa32.12■■■□□ 2.73
CBWD1-203ENST00000377400 STK26Q9P289 416 aa32.12■■■□□ 2.73
CBWD1-203ENST00000377400 AMOTL2Q9Y2J4 779 aa32.11■■■□□ 2.73
CBWD1-203ENST00000377400 KCNA6P17658 529 aa32.1■■■□□ 2.73
CBWD1-203ENST00000377400 SETD1AO15047 1707 aaKnown RBP32.1■■■□□ 2.73
CBWD1-203ENST00000377400 ROCK2O75116 1388 aaKnown RBP32.08■■■□□ 2.73
CBWD1-203ENST00000377400 NBPF1Q3BBV0 1214 aa32.08■■■□□ 2.73
CBWD1-203ENST00000377400 KIAA1210Q9ULL0 1709 aa32.06■■■□□ 2.72
CBWD1-203ENST00000377400 PTPRUQ92729 1446 aa32.05■■■□□ 2.72
CBWD1-203ENST00000377400 TRPM1Q7Z4N2 1603 aa32.05■■■□□ 2.72
CBWD1-203ENST00000377400 ASXL1Q8IXJ9 1541 aa32.04■■■□□ 2.72
CBWD1-203ENST00000377400 CHD2O14647 1828 aaKnown RBP32.04■■■□□ 2.72
CBWD1-203ENST00000377400 YTHDC2Q9H6S0 1430 aaKnown RBP32.03■■■□□ 2.72
CBWD1-203ENST00000377400 LRPPRCP42704 1394 aaKnown RBP32.01■■■□□ 2.72
CBWD1-203ENST00000377400 TRAK1Q9UPV9 953 aa32.01■■■□□ 2.71
CBWD1-203ENST00000377400 ADGRB1O14514 1584 aa32.01■■■□□ 2.71
CBWD1-203ENST00000377400 PROSER2Q86WR7 435 aaPredicted RBP32■■■□□ 2.71
CBWD1-203ENST00000377400 CARD11Q9BXL7 1154 aa32■■■□□ 2.71
CBWD1-203ENST00000377400 RALGAPBQ86X10 1494 aa32■■■□□ 2.71
CBWD1-203ENST00000377400 NWD1Q149M9 1564 aa31.99■■■□□ 2.71
CBWD1-203ENST00000377400 STRCP1A6NGW2 1772 aa31.97■■■□□ 2.71
CBWD1-203ENST00000377400 CPS1P31327 1500 aa31.96■■■□□ 2.71
CBWD1-203ENST00000377400 NKTRP30414 1462 aaKnown RBP31.96■■■□□ 2.71
CBWD1-203ENST00000377400 RBM33Q96EV2 1170 aaKnown RBP31.96■■■□□ 2.71
CBWD1-203ENST00000377400 ABCC11Q96J66 1382 aa31.95■■■□□ 2.71
CBWD1-203ENST00000377400 XRN1Q8IZH2 1706 aaKnown RBP31.95■■■□□ 2.71
CBWD1-203ENST00000377400 C14orf37Q86TY3 774 aa31.94■■■□□ 2.7
CBWD1-203ENST00000377400 ZEB1P37275 1124 aaPredicted RBP31.93■■■□□ 2.7
CBWD1-203ENST00000377400 POGKQ9P215 609 aa31.92■■■□□ 2.7
CBWD1-203ENST00000377400 ROBO2Q9HCK4 1378 aa31.92■■■□□ 2.7
CBWD1-203ENST00000377400 LTBP4Q8N2S1 1624 aa31.92■■■□□ 2.7
CBWD1-203ENST00000377400 PTCH1Q13635 1447 aa31.9■■■□□ 2.7
CBWD1-203ENST00000377400 SAFB2Q14151 953 aaKnown RBP eCLIP31.89■■■□□ 2.7
CBWD1-203ENST00000377400 WAPLQ7Z5K2 1190 aa31.89■■■□□ 2.7
CBWD1-203ENST00000377400 PRAM1Q96QH2 718 aa31.89■■■□□ 2.7
CBWD1-203ENST00000377400 GPRASP1Q5JY77 1395 aa31.89■■■□□ 2.7
CBWD1-203ENST00000377400 TECPR2O15040 1411 aa31.89■■■□□ 2.7
CBWD1-203ENST00000377400 TMEM94Q12767 1356 aa31.88■■■□□ 2.69
CBWD1-203ENST00000377400 KNDC1Q76NI1 1749 aa31.88■■■□□ 2.69
CBWD1-203ENST00000377400 LRRC7Q96NW7 1537 aa31.88■■■□□ 2.69
CBWD1-203ENST00000377400 EIF3AQ14152 1382 aaKnown RBP31.84■■■□□ 2.69
CBWD1-203ENST00000377400 DLC1Q96QB1 1528 aa31.84■■■□□ 2.69
CBWD1-203ENST00000377400 SIRT1Q96EB6 747 aa31.83■■■□□ 2.69
CBWD1-203ENST00000377400 FAM135BQ49AJ0 1406 aa31.83■■■□□ 2.69
CBWD1-203ENST00000377400 PLEKHH1Q9ULM0 1364 aa31.82■■■□□ 2.69
CBWD1-203ENST00000377400 ARHGEF28Q8N1W1 1705 aaKnown RBP31.8■■■□□ 2.68
CBWD1-203ENST00000377400 CERKQ8TCT0 537 aa31.79■■■□□ 2.68
CBWD1-203ENST00000377400 CENPJQ9HC77 1338 aaPredicted RBP31.78■■■□□ 2.68
CBWD1-203ENST00000377400 MSH6P52701 1360 aa31.77■■■□□ 2.68
CBWD1-203ENST00000377400 USP47Q96K76 1375 aa31.76■■■□□ 2.68
CBWD1-203ENST00000377400 MINK1Q8N4C8 1332 aaPredicted RBP31.75■■■□□ 2.67
CBWD1-203ENST00000377400 NCOA3Q9Y6Q9 1424 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms