RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 SLKQ9H2G2 1235 aaPredicted RBP9.28□□□□□ -0.92
CCDC93-202ENST00000376300 NLRP2Q9NX02 1062 aa9.28□□□□□ -0.92
CCDC93-202ENST00000376300 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
CCDC93-202ENST00000376300 FRAT1Q92837 279 aaPredicted RBP9.27□□□□□ -0.93
CCDC93-202ENST00000376300 PRDM11Q9NQV5 511 aa9.27□□□□□ -0.93
CCDC93-202ENST00000376300 ERCC6L2Q5T890 1561 aa9.27□□□□□ -0.93
CCDC93-202ENST00000376300 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.93
CCDC93-202ENST00000376300 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
CCDC93-202ENST00000376300 TARBP1Q13395 1621 aaKnown RBP9.26□□□□□ -0.93
CCDC93-202ENST00000376300 PRKCSHP14314 528 aaPredicted RBP9.26□□□□□ -0.93
CCDC93-202ENST00000376300 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
CCDC93-202ENST00000376300 TNRQ92752 1358 aa9.26□□□□□ -0.93
CCDC93-202ENST00000376300 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
CCDC93-202ENST00000376300 ZMYM3Q14202 1370 aa9.25□□□□□ -0.93
CCDC93-202ENST00000376300 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
CCDC93-202ENST00000376300 HECW1Q76N89 1606 aa9.25□□□□□ -0.93
CCDC93-202ENST00000376300 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
CCDC93-202ENST00000376300 KAT6BQ8WYB5 2073 aa9.25□□□□□ -0.93
CCDC93-202ENST00000376300 U2AF1L5P0DN76 240 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-202ENST00000376300 U2AF1Q01081 240 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC93-202ENST00000376300 CENPJQ9HC77 1338 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-202ENST00000376300 FTSJ3Q8IY81 847 aaKnown RBP9.24□□□□□ -0.93
CCDC93-202ENST00000376300 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
CCDC93-202ENST00000376300 LMTK3Q96Q04 1460 aa9.24□□□□□ -0.93
CCDC93-202ENST00000376300 COG3Q96JB2 828 aa9.23□□□□□ -0.93
CCDC93-202ENST00000376300 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
CCDC93-202ENST00000376300 GGNBP2Q9H3C7 697 aa9.23□□□□□ -0.93
CCDC93-202ENST00000376300 GPATCH8Q9UKJ3 1502 aaKnown RBP9.23□□□□□ -0.93
CCDC93-202ENST00000376300 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 HSCBQ8IWL3 235 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 GPRASP1Q5JY77 1395 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
CCDC93-202ENST00000376300 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
CCDC93-202ENST00000376300 NAP1L2Q9ULW6 460 aaPredicted RBP9.22□□□□□ -0.93
CCDC93-202ENST00000376300 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.93
CCDC93-202ENST00000376300 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
CCDC93-202ENST00000376300 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.94
CCDC93-202ENST00000376300 DAPK1P53355 1430 aa9.2□□□□□ -0.94
CCDC93-202ENST00000376300 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
CCDC93-202ENST00000376300 KCNA6P17658 529 aa9.2□□□□□ -0.94
CCDC93-202ENST00000376300 C8orf37Q96NL8 207 aa9.2□□□□□ -0.94
CCDC93-202ENST00000376300 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
CCDC93-202ENST00000376300 A2MP01023 1474 aa9.2□□□□□ -0.94
CCDC93-202ENST00000376300 PCF11O94913 1555 aaKnown RBP9.19□□□□□ -0.94
CCDC93-202ENST00000376300 ZNF518AQ6AHZ1 1483 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 PKNOX2Q96KN3 472 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
CCDC93-202ENST00000376300 CDK19Q9BWU1 502 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 CHD1O14646 1710 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 ABCC5O15440 1437 aa9.19□□□□□ -0.94
CCDC93-202ENST00000376300 KIAA0556O60303 1618 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 CAMSAP2Q08AD1 1489 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
CCDC93-202ENST00000376300 ADGRF5Q8IZF2 1346 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 EIF3AQ14152 1382 aaKnown RBP9.18□□□□□ -0.94
CCDC93-202ENST00000376300 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
CCDC93-202ENST00000376300 PANK3Q9H999 370 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 KIF14Q15058 1648 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
CCDC93-202ENST00000376300 IPO9Q96P70 1041 aaKnown RBP9.17□□□□□ -0.94
CCDC93-202ENST00000376300 ABCA5Q8WWZ7 1642 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 UHRF1BP1Q6BDS2 1440 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 NCOA1Q15788 1441 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 CABLES1Q8TDN4 633 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 PODXL2Q9NZ53 605 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 PHF8Q9UPP1 1060 aa9.17□□□□□ -0.94
CCDC93-202ENST00000376300 GTF2E1P29083 439 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-202ENST00000376300 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
CCDC93-202ENST00000376300 RAPGEF6Q8TEU7 1601 aa9.16□□□□□ -0.94
CCDC93-202ENST00000376300 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
CCDC93-202ENST00000376300 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
CCDC93-202ENST00000376300 PTMSP20962 102 aa9.15□□□□□ -0.94
CCDC93-202ENST00000376300 MSH6P52701 1360 aa9.15□□□□□ -0.94
CCDC93-202ENST00000376300 UHRF1BP1LA0JNW5 1464 aa9.15□□□□□ -0.94
CCDC93-202ENST00000376300 ABCC10Q5T3U5 1492 aa9.15□□□□□ -0.94
CCDC93-202ENST00000376300 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
CCDC93-202ENST00000376300 NUDT16Q96DE0 195 aaKnown RBP9.15□□□□□ -0.94
CCDC93-202ENST00000376300 ZNF335Q9H4Z2 1342 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-202ENST00000376300 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-202ENST00000376300 ZNF771Q7L3S4 317 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-202ENST00000376300 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-202ENST00000376300 DDX17Q92841 729 aaKnown RBP9.14□□□□□ -0.95
CCDC93-202ENST00000376300 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
CCDC93-202ENST00000376300 TIAM1Q13009 1591 aa9.14□□□□□ -0.95
CCDC93-202ENST00000376300 FAM135AQ9P2D6 1515 aa9.14□□□□□ -0.95
CCDC93-202ENST00000376300 LTKP29376 864 aa9.14□□□□□ -0.95
CCDC93-202ENST00000376300 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
CCDC93-202ENST00000376300 PBRM1Q86U86 1689 aa9.14□□□□□ -0.95
CCDC93-202ENST00000376300 KRT28Q7Z3Y7 464 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms