RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 SCAF11Q99590 1463 aaKnown RBP30.47■■■□□ 2.47
HLA-C-201ENST00000376228 TONSLQ96HA7 1378 aa30.45■■■□□ 2.47
HLA-C-201ENST00000376228 TMEM2Q9UHN6 1383 aa30.45■■■□□ 2.47
HLA-C-201ENST00000376228 LTKP29376 864 aa30.45■■■□□ 2.47
HLA-C-201ENST00000376228 TMEM131LA2VDJ0 1609 aa30.44■■■□□ 2.46
HLA-C-201ENST00000376228 TXNDC2Q86VQ3 553 aa30.43■■■□□ 2.46
HLA-C-201ENST00000376228 ZNF316A6NFI3 1004 aaPredicted RBP30.42■■■□□ 2.46
HLA-C-201ENST00000376228 PPP1R15AO75807 674 aaPredicted RBP30.42■■■□□ 2.46
HLA-C-201ENST00000376228 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
HLA-C-201ENST00000376228 EID1Q9Y6B2 187 aa30.39■■■□□ 2.46
HLA-C-201ENST00000376228 FBXO41Q8TF61 875 aa30.37■■■□□ 2.45
HLA-C-201ENST00000376228 FOXD1Q16676 465 aa30.37■■■□□ 2.45
HLA-C-201ENST00000376228 CLTCL1P53675 1640 aa30.34■■■□□ 2.45
HLA-C-201ENST00000376228 STRCP1A6NGW2 1772 aa30.33■■■□□ 2.45
HLA-C-201ENST00000376228 TRPM2O94759 1503 aa30.32■■■□□ 2.44
HLA-C-201ENST00000376228 SENP3Q9H4L4 574 aaPredicted RBP30.32■■■□□ 2.44
HLA-C-201ENST00000376228 ZFYVE9O95405 1425 aa30.3■■■□□ 2.44
HLA-C-201ENST00000376228 RIMS2Q9UQ26 1411 aa30.3■■■□□ 2.44
HLA-C-201ENST00000376228 KIF1BO60333 1816 aa30.27■■■□□ 2.44
HLA-C-201ENST00000376228 CPS1P31327 1500 aa30.25■■■□□ 2.43
HLA-C-201ENST00000376228 NUTM2DQ5VT03 806 aaPredicted RBP30.25■■■□□ 2.43
HLA-C-201ENST00000376228 IQSEC2Q5JU85 1478 aa30.23■■■□□ 2.43
HLA-C-201ENST00000376228 BCANQ96GW7 911 aa30.22■■■□□ 2.43
HLA-C-201ENST00000376228 SLC26A8Q96RN1 970 aa30.22■■■□□ 2.43
HLA-C-201ENST00000376228 L3MBTL2Q969R5 705 aa30.18■■■□□ 2.42
HLA-C-201ENST00000376228 PLEKHG1Q9ULL1 1385 aa30.18■■■□□ 2.42
HLA-C-201ENST00000376228 ZNF326Q5BKZ1 582 aaKnown RBP30.17■■■□□ 2.42
HLA-C-201ENST00000376228 HDGFP51858 240 aaKnown RBP30.17■■■□□ 2.42
HLA-C-201ENST00000376228 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.15■■■□□ 2.42
HLA-C-201ENST00000376228 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
HLA-C-201ENST00000376228 NEXMIFQ5QGS0 1516 aa30.11■■■□□ 2.41
HLA-C-201ENST00000376228 XIRP1Q702N8 1843 aaKnown RBP30.1■■■□□ 2.41
HLA-C-201ENST00000376228 UBAP1LF5GYI3 381 aa30.07■■■□□ 2.4
HLA-C-201ENST00000376228 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
HLA-C-201ENST00000376228 CHD2O14647 1828 aaKnown RBP30.07■■■□□ 2.4
HLA-C-201ENST00000376228 DIEXFQ68CQ4 756 aaKnown RBP30.06■■■□□ 2.4
HLA-C-201ENST00000376228 ADAMTS13Q76LX8 1427 aa30.06■■■□□ 2.4
HLA-C-201ENST00000376228 NRXN3Q9Y4C0 1643 aa30.06■■■□□ 2.4
HLA-C-201ENST00000376228 NWD1Q149M9 1564 aa30.05■■■□□ 2.4
HLA-C-201ENST00000376228 DIP2AQ14689 1571 aa30.04■■■□□ 2.4
HLA-C-201ENST00000376228 PPLO60437 1756 aa30.03■■■□□ 2.4
HLA-C-201ENST00000376228 KCNA6P17658 529 aa30.02■■■□□ 2.4
HLA-C-201ENST00000376228 SETBP1Q9Y6X0 1596 aa30■■■□□ 2.39
HLA-C-201ENST00000376228 TBX22Q9Y458 520 aa30■■■□□ 2.39
HLA-C-201ENST00000376228 RBM33Q96EV2 1170 aaKnown RBP29.98■■■□□ 2.39
HLA-C-201ENST00000376228 ALKQ9UM73 1620 aa29.97■■■□□ 2.39
HLA-C-201ENST00000376228 NKTRP30414 1462 aaKnown RBP29.96■■■□□ 2.39
HLA-C-201ENST00000376228 NBPF8Q3BBV2 869 aa29.95■■■□□ 2.38
HLA-C-201ENST00000376228 TMEM94Q12767 1356 aa29.94■■■□□ 2.38
HLA-C-201ENST00000376228 IFT172Q9UG01 1749 aa29.94■■■□□ 2.38
HLA-C-201ENST00000376228 RGL3Q3MIN7 710 aa29.94■■■□□ 2.38
HLA-C-201ENST00000376228 PROSER2Q86WR7 435 aaPredicted RBP29.94■■■□□ 2.38
HLA-C-201ENST00000376228 SPATA31E1Q6ZUB1 1445 aa29.94■■■□□ 2.38
HLA-C-201ENST00000376228 SCAF1Q9H7N4 1312 aaKnown RBP29.94■■■□□ 2.38
HLA-C-201ENST00000376228 PIP4K2BP78356 416 aa29.93■■■□□ 2.38
HLA-C-201ENST00000376228 TOM1O60784 492 aa29.92■■■□□ 2.38
HLA-C-201ENST00000376228 PTPRUQ92729 1446 aa29.91■■■□□ 2.38
HLA-C-201ENST00000376228 RPGRIP1LQ68CZ1 1315 aa29.9■■■□□ 2.38
HLA-C-201ENST00000376228 SETD1AO15047 1707 aaKnown RBP29.89■■■□□ 2.38
HLA-C-201ENST00000376228 VGFO15240 615 aaPredicted RBP29.89■■■□□ 2.38
HLA-C-201ENST00000376228 PIK3R4Q99570 1358 aa29.89■■■□□ 2.37
HLA-C-201ENST00000376228 METP08581 1390 aa29.88■■■□□ 2.37
HLA-C-201ENST00000376228 XRN1Q8IZH2 1706 aaKnown RBP29.86■■■□□ 2.37
HLA-C-201ENST00000376228 AMOTL2Q9Y2J4 779 aa29.85■■■□□ 2.37
HLA-C-201ENST00000376228 RALGAPBQ86X10 1494 aa29.84■■■□□ 2.37
HLA-C-201ENST00000376228 ADGRF5Q8IZF2 1346 aa29.82■■■□□ 2.36
HLA-C-201ENST00000376228 EIF4G2P78344 907 aaKnown RBP eCLIP29.81■■■□□ 2.36
HLA-C-201ENST00000376228 STAC3Q96MF2 364 aa29.81■■■□□ 2.36
HLA-C-201ENST00000376228 DCAF11Q8TEB1 546 aa29.8■■■□□ 2.36
HLA-C-201ENST00000376228 PRAG1Q86YV5 1406 aa29.77■■■□□ 2.36
HLA-C-201ENST00000376228 MSH6P52701 1360 aa29.76■■■□□ 2.35
HLA-C-201ENST00000376228 HSPA5P11021 654 aaKnown RBP29.76■■■□□ 2.35
HLA-C-201ENST00000376228 TRPM1Q7Z4N2 1603 aa29.75■■■□□ 2.35
HLA-C-201ENST00000376228 C14orf37Q86TY3 774 aa29.75■■■□□ 2.35
HLA-C-201ENST00000376228 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.74■■■□□ 2.35
HLA-C-201ENST00000376228 HSPA1LP34931 641 aa29.72■■■□□ 2.35
HLA-C-201ENST00000376228 PIK3C2GO75747 1445 aa29.71■■■□□ 2.35
HLA-C-201ENST00000376228 KDM2AQ9Y2K7 1162 aa29.71■■■□□ 2.35
HLA-C-201ENST00000376228 LAMC1P11047 1609 aa29.7■■■□□ 2.35
HLA-C-201ENST00000376228 NCOA3Q9Y6Q9 1424 aa29.7■■■□□ 2.34
HLA-C-201ENST00000376228 ROBO1Q9Y6N7 1651 aa29.69■■■□□ 2.34
HLA-C-201ENST00000376228 MYOM2P54296 1465 aa29.68■■■□□ 2.34
HLA-C-201ENST00000376228 HIRIP3Q9BW71 556 aaPredicted RBP29.67■■■□□ 2.34
HLA-C-201ENST00000376228 NALCNQ8IZF0 1738 aa29.67■■■□□ 2.34
HLA-C-201ENST00000376228 ASXL1Q8IXJ9 1541 aa29.67■■■□□ 2.34
HLA-C-201ENST00000376228 GPRASP1Q5JY77 1395 aa29.66■■■□□ 2.34
HLA-C-201ENST00000376228 NRXN1Q9ULB1 1477 aa29.65■■■□□ 2.34
HLA-C-201ENST00000376228 ROBO2Q9HCK4 1378 aa29.63■■■□□ 2.33
HLA-C-201ENST00000376228 PTCH1Q13635 1447 aa29.62■■■□□ 2.33
HLA-C-201ENST00000376228 USP47Q96K76 1375 aa29.62■■■□□ 2.33
HLA-C-201ENST00000376228 C19orf44Q9H6X5 657 aa29.62■■■□□ 2.33
HLA-C-201ENST00000376228 TMEM132EQ6IEE7 984 aa29.61■■■□□ 2.33
HLA-C-201ENST00000376228 KIAA1210Q9ULL0 1709 aa29.61■■■□□ 2.33
HLA-C-201ENST00000376228 SLAIN2Q9P270 581 aa29.61■■■□□ 2.33
HLA-C-201ENST00000376228 FAM135BQ49AJ0 1406 aa29.6■■■□□ 2.33
HLA-C-201ENST00000376228 ATF3P18847 181 aa29.59■■■□□ 2.33
HLA-C-201ENST00000376228 STK26Q9P289 416 aa29.59■■■□□ 2.33
HLA-C-201ENST00000376228 CARD11Q9BXL7 1154 aa29.58■■■□□ 2.33
HLA-C-201ENST00000376228 ROCK2O75116 1388 aaKnown RBP29.58■■■□□ 2.33
HLA-C-201ENST00000376228 KNDC1Q76NI1 1749 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms