RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
TUBGCP3-202ENST00000375669 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
TUBGCP3-202ENST00000375669 HSP90AA1P07900 732 aaKnown RBP23.1■■□□□ 1.29
TUBGCP3-202ENST00000375669 PANK1Q8TE04 598 aa23.1■■□□□ 1.29
TUBGCP3-202ENST00000375669 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
TUBGCP3-202ENST00000375669 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.09■■□□□ 1.29
TUBGCP3-202ENST00000375669 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
TUBGCP3-202ENST00000375669 PLEKHH2Q8IVE3 1493 aa23.09■■□□□ 1.29
TUBGCP3-202ENST00000375669 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
TUBGCP3-202ENST00000375669 CLCN1P35523 988 aa23.09■■□□□ 1.29
TUBGCP3-202ENST00000375669 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.29
TUBGCP3-202ENST00000375669 SPRYD3Q8NCJ5 442 aa23.08■■□□□ 1.28
TUBGCP3-202ENST00000375669 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
TUBGCP3-202ENST00000375669 USP19O94966 1318 aa23.07■■□□□ 1.28
TUBGCP3-202ENST00000375669 TNNT2P45379 298 aaPredicted RBP23.06■■□□□ 1.28
TUBGCP3-202ENST00000375669 SHANK2Q9UPX8 1470 aa23.06■■□□□ 1.28
TUBGCP3-202ENST00000375669 BECN1Q14457 450 aa23.05■■□□□ 1.28
TUBGCP3-202ENST00000375669 CANXP27824 592 aaKnown RBP23.05■■□□□ 1.28
TUBGCP3-202ENST00000375669 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
TUBGCP3-202ENST00000375669 BCL2L13Q9BXK5 485 aa23.04■■□□□ 1.28
TUBGCP3-202ENST00000375669 RRP7AQ9Y3A4 280 aaKnown RBP23.04■■□□□ 1.28
TUBGCP3-202ENST00000375669 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
TUBGCP3-202ENST00000375669 TNNQ9UQP3 1299 aa23.03■■□□□ 1.28
TUBGCP3-202ENST00000375669 EIF4G3O43432 1585 aaKnown RBP23.03■■□□□ 1.28
TUBGCP3-202ENST00000375669 VIRMAQ69YN4 1812 aaKnown RBP23.02■■□□□ 1.28
TUBGCP3-202ENST00000375669 WDR7Q9Y4E6 1490 aa23.01■■□□□ 1.27
TUBGCP3-202ENST00000375669 GOLGA6L3A6NEY3 463 aa23.01■■□□□ 1.27
TUBGCP3-202ENST00000375669 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
TUBGCP3-202ENST00000375669 CCDC141Q6ZP82 1450 aa23■■□□□ 1.27
TUBGCP3-202ENST00000375669 FSD2A1L4K1 749 aa22.99■■□□□ 1.27
TUBGCP3-202ENST00000375669 ANTXR1Q9H6X2 564 aa22.99■■□□□ 1.27
TUBGCP3-202ENST00000375669 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
TUBGCP3-202ENST00000375669 SYCP2Q9BX26 1530 aa22.96■■□□□ 1.27
TUBGCP3-202ENST00000375669 SAMD9LQ8IVG5 1584 aa22.96■■□□□ 1.27
TUBGCP3-202ENST00000375669 PANK2Q9BZ23 570 aa22.95■■□□□ 1.26
TUBGCP3-202ENST00000375669 TRMT2AQ8IZ69 625 aaKnown RBP22.95■■□□□ 1.26
TUBGCP3-202ENST00000375669 ABCA8O94911 1581 aa22.94■■□□□ 1.26
TUBGCP3-202ENST00000375669 GZF1Q9H116 711 aaPredicted RBP22.93■■□□□ 1.26
TUBGCP3-202ENST00000375669 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
TUBGCP3-202ENST00000375669 NKTRP30414 1462 aaKnown RBP22.92■■□□□ 1.26
TUBGCP3-202ENST00000375669 E9PSI1 815 aa22.91■■□□□ 1.26
TUBGCP3-202ENST00000375669 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
TUBGCP3-202ENST00000375669 EIF3AQ14152 1382 aaKnown RBP22.9■■□□□ 1.26
TUBGCP3-202ENST00000375669 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
TUBGCP3-202ENST00000375669 RLBP1P12271 317 aa22.9■■□□□ 1.26
TUBGCP3-202ENST00000375669 PCDHB15Q9Y5E8 787 aa22.89■■□□□ 1.26
TUBGCP3-202ENST00000375669 NLRP1Q9C000 1473 aa22.88■■□□□ 1.25
TUBGCP3-202ENST00000375669 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
TUBGCP3-202ENST00000375669 WWC1Q8IX03 1113 aa22.88■■□□□ 1.25
TUBGCP3-202ENST00000375669 CFAP70Q5T0N1 1121 aa22.88■■□□□ 1.25
TUBGCP3-202ENST00000375669 MYO5CQ9NQX4 1742 aa22.87■■□□□ 1.25
TUBGCP3-202ENST00000375669 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
TUBGCP3-202ENST00000375669 MCM4P33991 863 aa22.86■■□□□ 1.25
TUBGCP3-202ENST00000375669 MAPK8IP3Q9UPT6 1336 aa22.86■■□□□ 1.25
TUBGCP3-202ENST00000375669 MRE11P49959 708 aa22.85■■□□□ 1.25
TUBGCP3-202ENST00000375669 CDC42BPBQ9Y5S2 1711 aa22.85■■□□□ 1.25
TUBGCP3-202ENST00000375669 ARHGEF5Q12774 1597 aa22.85■■□□□ 1.25
TUBGCP3-202ENST00000375669 TBC1D2Q9BYX2 928 aa22.83■■□□□ 1.25
TUBGCP3-202ENST00000375669 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
TUBGCP3-202ENST00000375669 CGNL1Q0VF96 1302 aa22.83■■□□□ 1.24
TUBGCP3-202ENST00000375669 ESPNB1AK53 854 aa22.82■■□□□ 1.24
TUBGCP3-202ENST00000375669 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
TUBGCP3-202ENST00000375669 ASXL1Q8IXJ9 1541 aa22.82■■□□□ 1.24
TUBGCP3-202ENST00000375669 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
TUBGCP3-202ENST00000375669 AFAP1Q8N556 730 aa22.81■■□□□ 1.24
TUBGCP3-202ENST00000375669 PDZRN3Q9UPQ7 1066 aa22.81■■□□□ 1.24
TUBGCP3-202ENST00000375669 NUP160Q12769 1436 aa22.81■■□□□ 1.24
TUBGCP3-202ENST00000375669 MYH16Q9H6N6 1097 aa22.8■■□□□ 1.24
TUBGCP3-202ENST00000375669 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
TUBGCP3-202ENST00000375669 PDE3AQ14432 1141 aa22.8■■□□□ 1.24
TUBGCP3-202ENST00000375669 TRAK2O60296 914 aa22.79■■□□□ 1.24
TUBGCP3-202ENST00000375669 TBC1D32Q96NH3 1257 aa22.79■■□□□ 1.24
TUBGCP3-202ENST00000375669 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
TUBGCP3-202ENST00000375669 RARSP54136 660 aaKnown RBP22.78■■□□□ 1.24
TUBGCP3-202ENST00000375669 ERBB4Q15303 1308 aa22.77■■□□□ 1.24
TUBGCP3-202ENST00000375669 TCP11L2Q8N4U5 519 aa22.77■■□□□ 1.24
TUBGCP3-202ENST00000375669 GRPEL1Q9HAV7 217 aa22.77■■□□□ 1.24
TUBGCP3-202ENST00000375669 TPM2P07951 284 aa22.76■■□□□ 1.23
TUBGCP3-202ENST00000375669 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
TUBGCP3-202ENST00000375669 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
TUBGCP3-202ENST00000375669 MFAP1P55081 439 aaKnown RBP22.75■■□□□ 1.23
TUBGCP3-202ENST00000375669 PDCL3Q9H2J4 239 aa22.75■■□□□ 1.23
TUBGCP3-202ENST00000375669 SCAF11Q99590 1463 aaKnown RBP22.75■■□□□ 1.23
TUBGCP3-202ENST00000375669 ADGRF5Q8IZF2 1346 aa22.75■■□□□ 1.23
TUBGCP3-202ENST00000375669 SLC12A5Q9H2X9 1139 aa22.74■■□□□ 1.23
TUBGCP3-202ENST00000375669 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
TUBGCP3-202ENST00000375669 LAMC1P11047 1609 aa22.73■■□□□ 1.23
TUBGCP3-202ENST00000375669 UNC13BO14795 1591 aa22.73■■□□□ 1.23
TUBGCP3-202ENST00000375669 MORC1Q86VD1 984 aa22.73■■□□□ 1.23
TUBGCP3-202ENST00000375669 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
TUBGCP3-202ENST00000375669 CHMP5Q9NZZ3 219 aa22.72■■□□□ 1.23
TUBGCP3-202ENST00000375669 ISY1Q9ULR0 285 aaKnown RBP22.72■■□□□ 1.23
TUBGCP3-202ENST00000375669 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
TUBGCP3-202ENST00000375669 TRAK1Q9UPV9 953 aa22.71■■□□□ 1.23
TUBGCP3-202ENST00000375669 TSR2Q969E8 191 aaKnown RBP22.7■■□□□ 1.22
TUBGCP3-202ENST00000375669 TRIM44Q96DX7 344 aaPredicted RBP22.7■■□□□ 1.22
TUBGCP3-202ENST00000375669 PODXL2Q9NZ53 605 aa22.7■■□□□ 1.22
TUBGCP3-202ENST00000375669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
TUBGCP3-202ENST00000375669 IQGAP3Q86VI3 1631 aa22.69■■□□□ 1.22
TUBGCP3-202ENST00000375669 TRAPPC8Q9Y2L5 1435 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms