RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
MCF2L-204ENST00000375608 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
MCF2L-204ENST00000375608 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
MCF2L-204ENST00000375608 TRAK2O60296 914 aa17.38■□□□□ 0.37
MCF2L-204ENST00000375608 APBB1O00213 710 aa17.38■□□□□ 0.37
MCF2L-204ENST00000375608 RRAGDQ9NQL2 400 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-204ENST00000375608 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
MCF2L-204ENST00000375608 GPATCH8Q9UKJ3 1502 aaKnown RBP17.37■□□□□ 0.37
MCF2L-204ENST00000375608 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
MCF2L-204ENST00000375608 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-204ENST00000375608 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
MCF2L-204ENST00000375608 KIF3BO15066 747 aa17.36■□□□□ 0.37
MCF2L-204ENST00000375608 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
MCF2L-204ENST00000375608 NUP153P49790 1475 aaKnown RBP17.36■□□□□ 0.37
MCF2L-204ENST00000375608 WWC1Q8IX03 1113 aa17.36■□□□□ 0.37
MCF2L-204ENST00000375608 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
MCF2L-204ENST00000375608 MCM4P33991 863 aa17.34■□□□□ 0.37
MCF2L-204ENST00000375608 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-204ENST00000375608 STK26Q9P289 416 aa17.34■□□□□ 0.37
MCF2L-204ENST00000375608 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
MCF2L-204ENST00000375608 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
MCF2L-204ENST00000375608 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
MCF2L-204ENST00000375608 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
MCF2L-204ENST00000375608 SAMD9Q5K651 1589 aa17.33■□□□□ 0.37
MCF2L-204ENST00000375608 MTHFSP49914 203 aa17.33■□□□□ 0.36
MCF2L-204ENST00000375608 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.36
MCF2L-204ENST00000375608 KIAA0586Q9BVV6 1533 aa17.33■□□□□ 0.36
MCF2L-204ENST00000375608 RLBP1P12271 317 aa17.33■□□□□ 0.36
MCF2L-204ENST00000375608 XRCC6P12956 609 aaKnown RBP eCLIP17.33■□□□□ 0.36
MCF2L-204ENST00000375608 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
MCF2L-204ENST00000375608 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
MCF2L-204ENST00000375608 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
MCF2L-204ENST00000375608 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
MCF2L-204ENST00000375608 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
MCF2L-204ENST00000375608 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-204ENST00000375608 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-204ENST00000375608 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
MCF2L-204ENST00000375608 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
MCF2L-204ENST00000375608 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
MCF2L-204ENST00000375608 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
MCF2L-204ENST00000375608 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
MCF2L-204ENST00000375608 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
MCF2L-204ENST00000375608 WDR62O43379 1518 aa17.28■□□□□ 0.36
MCF2L-204ENST00000375608 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
MCF2L-204ENST00000375608 KDM5CP41229 1560 aa17.28■□□□□ 0.36
MCF2L-204ENST00000375608 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.36
MCF2L-204ENST00000375608 GGT6Q6P531 493 aa17.27■□□□□ 0.36
MCF2L-204ENST00000375608 GBP4Q96PP9 640 aa17.27■□□□□ 0.36
MCF2L-204ENST00000375608 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.35
MCF2L-204ENST00000375608 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.35
MCF2L-204ENST00000375608 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.35
MCF2L-204ENST00000375608 EFCAB2Q5VUJ9 269 aa17.26■□□□□ 0.35
MCF2L-204ENST00000375608 SPAG9O60271 1321 aaKnown RBP17.26■□□□□ 0.35
MCF2L-204ENST00000375608 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
MCF2L-204ENST00000375608 PTPRGP23470 1445 aa17.25■□□□□ 0.35
MCF2L-204ENST00000375608 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
MCF2L-204ENST00000375608 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
MCF2L-204ENST00000375608 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
MCF2L-204ENST00000375608 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
MCF2L-204ENST00000375608 MSNP26038 577 aaKnown RBP17.24■□□□□ 0.35
MCF2L-204ENST00000375608 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
MCF2L-204ENST00000375608 MRE11P49959 708 aa17.23■□□□□ 0.35
MCF2L-204ENST00000375608 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-204ENST00000375608 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-204ENST00000375608 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
MCF2L-204ENST00000375608 DDX11L8A8MPP1 907 aa17.23■□□□□ 0.35
MCF2L-204ENST00000375608 KIF14Q15058 1648 aa17.23■□□□□ 0.35
MCF2L-204ENST00000375608 GGNBP2Q9H3C7 697 aa17.22■□□□□ 0.35
MCF2L-204ENST00000375608 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
MCF2L-204ENST00000375608 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
MCF2L-204ENST00000375608 ESPNB1AK53 854 aa17.21■□□□□ 0.35
MCF2L-204ENST00000375608 PLEKHH2Q8IVE3 1493 aa17.21■□□□□ 0.34
MCF2L-204ENST00000375608 PTMAP06454 111 aaKnown RBP17.2■□□□□ 0.34
MCF2L-204ENST00000375608 MBD5Q9P267 1494 aa17.2■□□□□ 0.34
MCF2L-204ENST00000375608 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
MCF2L-204ENST00000375608 CARD14Q9BXL6 1004 aa17.2■□□□□ 0.34
MCF2L-204ENST00000375608 USP19O94966 1318 aa17.2■□□□□ 0.34
MCF2L-204ENST00000375608 PKNOX2Q96KN3 472 aa17.2■□□□□ 0.34
MCF2L-204ENST00000375608 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
MCF2L-204ENST00000375608 BLMP54132 1417 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-204ENST00000375608 RBM10P98175 930 aaKnown RBP17.19■□□□□ 0.34
MCF2L-204ENST00000375608 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
MCF2L-204ENST00000375608 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
MCF2L-204ENST00000375608 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
MCF2L-204ENST00000375608 RIPK4P57078 832 aa17.18■□□□□ 0.34
MCF2L-204ENST00000375608 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-204ENST00000375608 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
MCF2L-204ENST00000375608 DDX19BQ9UMR2 479 aa17.17■□□□□ 0.34
MCF2L-204ENST00000375608 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
MCF2L-204ENST00000375608 ZMYM4Q5VZL5 1548 aa17.17■□□□□ 0.34
MCF2L-204ENST00000375608 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
MCF2L-204ENST00000375608 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-204ENST00000375608 MPNDQ8N594 471 aa17.16■□□□□ 0.34
MCF2L-204ENST00000375608 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
MCF2L-204ENST00000375608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.343e-6■■□□□ 13.8
MCF2L-204ENST00000375608 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
MCF2L-204ENST00000375608 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
MCF2L-204ENST00000375608 A2MP01023 1474 aa17.15■□□□□ 0.34
MCF2L-204ENST00000375608 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
MCF2L-204ENST00000375608 DISP1Q96F81 1524 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms