RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
COL16A1-201ENST00000373667 RIMS2Q9UQ26 1411 aa27.73■■■□□ 2.03
COL16A1-201ENST00000373667 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.71■■■□□ 2.03
COL16A1-201ENST00000373667 BCANQ96GW7 911 aa27.71■■■□□ 2.03
COL16A1-201ENST00000373667 SENP3Q9H4L4 574 aaPredicted RBP27.71■■■□□ 2.03
COL16A1-201ENST00000373667 POLR1AO95602 1720 aaPredicted RBP27.69■■■□□ 2.02
COL16A1-201ENST00000373667 SCAF11Q99590 1463 aaKnown RBP27.69■■■□□ 2.02
COL16A1-201ENST00000373667 NPHP4O75161 1426 aaPredicted RBP27.66■■■□□ 2.02
COL16A1-201ENST00000373667 ZFYVE9O95405 1425 aa27.65■■■□□ 2.02
COL16A1-201ENST00000373667 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
COL16A1-201ENST00000373667 SIN3AQ96ST3 1273 aa27.64■■■□□ 2.02
COL16A1-201ENST00000373667 RPGRIP1LQ68CZ1 1315 aa27.64■■■□□ 2.01
COL16A1-201ENST00000373667 SPATA31E1Q6ZUB1 1445 aa27.63■■■□□ 2.01
COL16A1-201ENST00000373667 NEURL4Q96JN8 1562 aa27.63■■■□□ 2.01
COL16A1-201ENST00000373667 MED14O60244 1454 aa27.61■■■□□ 2.01
COL16A1-201ENST00000373667 VGFO15240 615 aaPredicted RBP27.6■■■□□ 2.01
COL16A1-201ENST00000373667 NEXMIFQ5QGS0 1516 aa27.58■■■□□ 2.01
COL16A1-201ENST00000373667 SLC26A8Q96RN1 970 aa27.58■■■□□ 2.01
COL16A1-201ENST00000373667 IQGAP1P46940 1657 aa27.58■■■□□ 2.01
COL16A1-201ENST00000373667 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
COL16A1-201ENST00000373667 CCER1Q8TC90 406 aaPredicted RBP27.55■■■□□ 2
COL16A1-201ENST00000373667 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
COL16A1-201ENST00000373667 DCAF11Q8TEB1 546 aa27.53■■■□□ 2
COL16A1-201ENST00000373667 PPLO60437 1756 aa27.52■■■□□ 2
COL16A1-201ENST00000373667 ADGRF5Q8IZF2 1346 aa27.5■■□□□ 1.99
COL16A1-201ENST00000373667 ZNF335Q9H4Z2 1342 aaPredicted RBP27.47■■□□□ 1.99
COL16A1-201ENST00000373667 TBX22Q9Y458 520 aa27.47■■□□□ 1.99
COL16A1-201ENST00000373667 IFT172Q9UG01 1749 aa27.45■■□□□ 1.99
COL16A1-201ENST00000373667 L3MBTL2Q969R5 705 aa27.43■■□□□ 1.98
COL16A1-201ENST00000373667 ADAMTS13Q76LX8 1427 aa27.42■■□□□ 1.98
COL16A1-201ENST00000373667 STAC3Q96MF2 364 aa27.41■■□□□ 1.98
COL16A1-201ENST00000373667 CLSPNQ9HAW4 1339 aa27.4■■□□□ 1.98
COL16A1-201ENST00000373667 SETBP1Q9Y6X0 1596 aa27.39■■□□□ 1.98
COL16A1-201ENST00000373667 MYOM2P54296 1465 aa27.38■■□□□ 1.97
COL16A1-201ENST00000373667 NRXN3Q9Y4C0 1643 aa27.38■■□□□ 1.97
COL16A1-201ENST00000373667 TONSLQ96HA7 1378 aa27.37■■□□□ 1.97
COL16A1-201ENST00000373667 KCNA6P17658 529 aa27.37■■□□□ 1.97
COL16A1-201ENST00000373667 DIP2AQ14689 1571 aa27.36■■□□□ 1.97
COL16A1-201ENST00000373667 ALKQ9UM73 1620 aa27.35■■□□□ 1.97
COL16A1-201ENST00000373667 CFAP70Q5T0N1 1121 aa27.34■■□□□ 1.97
COL16A1-201ENST00000373667 METP08581 1390 aa27.34■■□□□ 1.97
COL16A1-201ENST00000373667 PIK3C2GO75747 1445 aa27.33■■□□□ 1.97
COL16A1-201ENST00000373667 C14orf93Q9H972 538 aaKnown RBP27.32■■□□□ 1.96
COL16A1-201ENST00000373667 AMOTL2Q9Y2J4 779 aa27.32■■□□□ 1.96
COL16A1-201ENST00000373667 NRXN1Q9ULB1 1477 aa27.32■■□□□ 1.96
COL16A1-201ENST00000373667 TMEM132EQ6IEE7 984 aa27.3■■□□□ 1.96
COL16A1-201ENST00000373667 PIK3R4Q99570 1358 aa27.3■■□□□ 1.96
COL16A1-201ENST00000373667 LTBP4Q8N2S1 1624 aa27.3■■□□□ 1.96
COL16A1-201ENST00000373667 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
COL16A1-201ENST00000373667 STRCP1A6NGW2 1772 aa27.29■■□□□ 1.96
COL16A1-201ENST00000373667 CHD2O14647 1828 aaKnown RBP27.28■■□□□ 1.96
COL16A1-201ENST00000373667 CERKQ8TCT0 537 aa27.28■■□□□ 1.96
COL16A1-201ENST00000373667 PTPRUQ92729 1446 aa27.27■■□□□ 1.96
COL16A1-201ENST00000373667 STK26Q9P289 416 aa27.27■■□□□ 1.96
COL16A1-201ENST00000373667 CPS1P31327 1500 aa27.26■■□□□ 1.95
COL16A1-201ENST00000373667 SETD1AO15047 1707 aaKnown RBP27.24■■□□□ 1.95
COL16A1-201ENST00000373667 RBM33Q96EV2 1170 aaKnown RBP27.24■■□□□ 1.95
COL16A1-201ENST00000373667 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
COL16A1-201ENST00000373667 LAMC1P11047 1609 aa27.2■■□□□ 1.95
COL16A1-201ENST00000373667 NWD1Q149M9 1564 aa27.2■■□□□ 1.94
COL16A1-201ENST00000373667 TIMELESSQ9UNS1 1208 aa27.2■■□□□ 1.94
COL16A1-201ENST00000373667 LRRC7Q96NW7 1537 aa27.19■■□□□ 1.94
COL16A1-201ENST00000373667 NBPF8Q3BBV2 869 aa27.18■■□□□ 1.94
COL16A1-201ENST00000373667 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
COL16A1-201ENST00000373667 C14orf37Q86TY3 774 aa27.17■■□□□ 1.94
COL16A1-201ENST00000373667 NKTRP30414 1462 aaKnown RBP27.17■■□□□ 1.94
COL16A1-201ENST00000373667 LRPPRCP42704 1394 aaKnown RBP27.16■■□□□ 1.94
COL16A1-201ENST00000373667 TMEM94Q12767 1356 aa27.16■■□□□ 1.94
COL16A1-201ENST00000373667 ASXL1Q8IXJ9 1541 aa27.16■■□□□ 1.94
COL16A1-201ENST00000373667 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
COL16A1-201ENST00000373667 XRN1Q8IZH2 1706 aaKnown RBP27.14■■□□□ 1.94
COL16A1-201ENST00000373667 TRAK1Q9UPV9 953 aa27.14■■□□□ 1.94
COL16A1-201ENST00000373667 ABCC11Q96J66 1382 aa27.12■■□□□ 1.93
COL16A1-201ENST00000373667 KIAA1210Q9ULL0 1709 aa27.11■■□□□ 1.93
COL16A1-201ENST00000373667 ROBO2Q9HCK4 1378 aa27.1■■□□□ 1.93
COL16A1-201ENST00000373667 WAPLQ7Z5K2 1190 aa27.1■■□□□ 1.93
COL16A1-201ENST00000373667 ADGRB1O14514 1584 aa27.09■■□□□ 1.93
COL16A1-201ENST00000373667 XIRP1Q702N8 1843 aaKnown RBP27.07■■□□□ 1.92
COL16A1-201ENST00000373667 POGKQ9P215 609 aa27.07■■□□□ 1.92
COL16A1-201ENST00000373667 ROCK2O75116 1388 aaKnown RBP27.07■■□□□ 1.92
COL16A1-201ENST00000373667 TRPM1Q7Z4N2 1603 aa27.06■■□□□ 1.92
COL16A1-201ENST00000373667 PTCH1Q13635 1447 aa27.06■■□□□ 1.92
COL16A1-201ENST00000373667 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
COL16A1-201ENST00000373667 UBAP1LF5GYI3 381 aa27.05■■□□□ 1.92
COL16A1-201ENST00000373667 SAFB2Q14151 953 aaKnown RBP eCLIP27.05■■□□□ 1.92
COL16A1-201ENST00000373667 PRAM1Q96QH2 718 aa27.05■■□□□ 1.92
COL16A1-201ENST00000373667 SIRT1Q96EB6 747 aa27.04■■□□□ 1.92
COL16A1-201ENST00000373667 MSH6P52701 1360 aa27.04■■□□□ 1.92
COL16A1-201ENST00000373667 TECPR2O15040 1411 aa27.04■■□□□ 1.92
COL16A1-201ENST00000373667 C19orf44Q9H6X5 657 aa27.03■■□□□ 1.92
COL16A1-201ENST00000373667 NCOA3Q9Y6Q9 1424 aa27.03■■□□□ 1.92
COL16A1-201ENST00000373667 KNDC1Q76NI1 1749 aa27.02■■□□□ 1.92
COL16A1-201ENST00000373667 PLEKHH1Q9ULM0 1364 aa27.01■■□□□ 1.91
COL16A1-201ENST00000373667 TOM1O60784 492 aa27.01■■□□□ 1.91
COL16A1-201ENST00000373667 CARD11Q9BXL7 1154 aa27.01■■□□□ 1.91
COL16A1-201ENST00000373667 ATF3P18847 181 aa27■■□□□ 1.91
COL16A1-201ENST00000373667 FAM135BQ49AJ0 1406 aa26.99■■□□□ 1.91
COL16A1-201ENST00000373667 DLC1Q96QB1 1528 aa26.98■■□□□ 1.91
COL16A1-201ENST00000373667 RALGAPBQ86X10 1494 aa26.98■■□□□ 1.91
COL16A1-201ENST00000373667 SCAF1Q9H7N4 1312 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms