RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 IFT172Q9UG01 1749 aa16.66■□□□□ 0.26
RABEPK-203ENST00000373544 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
RABEPK-203ENST00000373544 MYOM2P54296 1465 aa16.65■□□□□ 0.26
RABEPK-203ENST00000373544 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
RABEPK-203ENST00000373544 NEURL4Q96JN8 1562 aa16.64■□□□□ 0.25
RABEPK-203ENST00000373544 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
RABEPK-203ENST00000373544 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
RABEPK-203ENST00000373544 IQGAP1P46940 1657 aa16.64■□□□□ 0.25
RABEPK-203ENST00000373544 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
RABEPK-203ENST00000373544 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
RABEPK-203ENST00000373544 TMF1P82094 1093 aa16.63■□□□□ 0.25
RABEPK-203ENST00000373544 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
RABEPK-203ENST00000373544 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
RABEPK-203ENST00000373544 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
RABEPK-203ENST00000373544 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
RABEPK-203ENST00000373544 PPLO60437 1756 aa16.62■□□□□ 0.25
RABEPK-203ENST00000373544 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
RABEPK-203ENST00000373544 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
RABEPK-203ENST00000373544 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
RABEPK-203ENST00000373544 TRAK1Q9UPV9 953 aa16.59■□□□□ 0.25
RABEPK-203ENST00000373544 NRXN1Q9ULB1 1477 aa16.59■□□□□ 0.25
RABEPK-203ENST00000373544 AGLP35573 1532 aa16.59■□□□□ 0.25
RABEPK-203ENST00000373544 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
RABEPK-203ENST00000373544 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.25
RABEPK-203ENST00000373544 PANK3Q9H999 370 aa16.58■□□□□ 0.25
RABEPK-203ENST00000373544 SLC52A1Q9NWF4 448 aa16.58■□□□□ 0.25
RABEPK-203ENST00000373544 PIK3C2GO75747 1445 aa16.58■□□□□ 0.24
RABEPK-203ENST00000373544 KIAA1210Q9ULL0 1709 aa16.57■□□□□ 0.24
RABEPK-203ENST00000373544 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
RABEPK-203ENST00000373544 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
RABEPK-203ENST00000373544 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
RABEPK-203ENST00000373544 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
RABEPK-203ENST00000373544 NEXMIFQ5QGS0 1516 aa16.56■□□□□ 0.24
RABEPK-203ENST00000373544 RPGRIP1LQ68CZ1 1315 aa16.56■□□□□ 0.24
RABEPK-203ENST00000373544 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
RABEPK-203ENST00000373544 ESF1Q9H501 851 aaKnown RBP16.55■□□□□ 0.24
RABEPK-203ENST00000373544 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
RABEPK-203ENST00000373544 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
RABEPK-203ENST00000373544 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
RABEPK-203ENST00000373544 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
RABEPK-203ENST00000373544 TMEM131LA2VDJ0 1609 aa16.53■□□□□ 0.24
RABEPK-203ENST00000373544 SAFB2Q14151 953 aaKnown RBP eCLIP16.51■□□□□ 0.23
RABEPK-203ENST00000373544 STK26Q9P289 416 aa16.51■□□□□ 0.23
RABEPK-203ENST00000373544 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
RABEPK-203ENST00000373544 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
RABEPK-203ENST00000373544 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
RABEPK-203ENST00000373544 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
RABEPK-203ENST00000373544 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
RABEPK-203ENST00000373544 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
RABEPK-203ENST00000373544 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
RABEPK-203ENST00000373544 CEBPAP49715 358 aaPredicted RBP16.47■□□□□ 0.23
RABEPK-203ENST00000373544 SPATA31D1Q6ZQQ2 1576 aa16.46■□□□□ 0.23
RABEPK-203ENST00000373544 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
RABEPK-203ENST00000373544 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
RABEPK-203ENST00000373544 RALBP1Q15311 655 aa16.45■□□□□ 0.22
RABEPK-203ENST00000373544 KDM5AP29375 1690 aaKnown RBP16.44■□□□□ 0.22
RABEPK-203ENST00000373544 MYOM1P52179 1685 aa16.44■□□□□ 0.22
RABEPK-203ENST00000373544 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
RABEPK-203ENST00000373544 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
RABEPK-203ENST00000373544 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
RABEPK-203ENST00000373544 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
RABEPK-203ENST00000373544 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
RABEPK-203ENST00000373544 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
RABEPK-203ENST00000373544 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
RABEPK-203ENST00000373544 ZFYVE9O95405 1425 aa16.42■□□□□ 0.22
RABEPK-203ENST00000373544 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
RABEPK-203ENST00000373544 ARHGEF28Q8N1W1 1705 aaKnown RBP16.4■□□□□ 0.22
RABEPK-203ENST00000373544 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
RABEPK-203ENST00000373544 TNRQ92752 1358 aa16.39■□□□□ 0.21
RABEPK-203ENST00000373544 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
RABEPK-203ENST00000373544 NLRP13Q86W25 1043 aa16.39■□□□□ 0.21
RABEPK-203ENST00000373544 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
RABEPK-203ENST00000373544 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
RABEPK-203ENST00000373544 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
RABEPK-203ENST00000373544 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
RABEPK-203ENST00000373544 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
RABEPK-203ENST00000373544 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
RABEPK-203ENST00000373544 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
RABEPK-203ENST00000373544 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
RABEPK-203ENST00000373544 BCANQ96GW7 911 aa16.36■□□□□ 0.21
RABEPK-203ENST00000373544 POGKQ9P215 609 aa16.36■□□□□ 0.21
RABEPK-203ENST00000373544 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
RABEPK-203ENST00000373544 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
RABEPK-203ENST00000373544 PTPRMP28827 1452 aa16.34■□□□□ 0.21
RABEPK-203ENST00000373544 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
RABEPK-203ENST00000373544 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
RABEPK-203ENST00000373544 SALL2Q9Y467 1007 aaPredicted RBP16.34■□□□□ 0.21
RABEPK-203ENST00000373544 WAPLQ7Z5K2 1190 aa16.34■□□□□ 0.21
RABEPK-203ENST00000373544 ZBED9Q6R2W3 1325 aa16.33■□□□□ 0.21
RABEPK-203ENST00000373544 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
RABEPK-203ENST00000373544 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
RABEPK-203ENST00000373544 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.2
RABEPK-203ENST00000373544 FKBP8Q14318 412 aa16.33■□□□□ 0.2
RABEPK-203ENST00000373544 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
RABEPK-203ENST00000373544 METP08581 1390 aa16.3■□□□□ 0.2
RABEPK-203ENST00000373544 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
RABEPK-203ENST00000373544 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
RABEPK-203ENST00000373544 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
RABEPK-203ENST00000373544 FER1L4A9Z1Z3 1794 aa16.3■□□□□ 0.2
RABEPK-203ENST00000373544 C3P01024 1663 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms