RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 HDGFP51858 240 aaKnown RBP27.1■■□□□ 1.93
PBX3-205ENST00000373492 TRPM2O94759 1503 aa27.09■■□□□ 1.93
PBX3-205ENST00000373492 ZFYVE9O95405 1425 aa27.07■■□□□ 1.92
PBX3-205ENST00000373492 CLTCL1P53675 1640 aa27.05■■□□□ 1.92
PBX3-205ENST00000373492 RIMS2Q9UQ26 1411 aa27.05■■□□□ 1.92
PBX3-205ENST00000373492 IQSEC2Q5JU85 1478 aa27.05■■□□□ 1.92
PBX3-205ENST00000373492 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.04■■□□□ 1.92
PBX3-205ENST00000373492 CPS1P31327 1500 aa27.01■■□□□ 1.91
PBX3-205ENST00000373492 FOXD1Q16676 465 aa27.01■■□□□ 1.91
PBX3-205ENST00000373492 PPP1R15AO75807 674 aaPredicted RBP27■■□□□ 1.91
PBX3-205ENST00000373492 PLEKHG1Q9ULL1 1385 aa26.98■■□□□ 1.91
PBX3-205ENST00000373492 PCGF6Q9BYE7 350 aa26.97■■□□□ 1.91
PBX3-205ENST00000373492 BCANQ96GW7 911 aa26.95■■□□□ 1.9
PBX3-205ENST00000373492 ZNF326Q5BKZ1 582 aaKnown RBP26.94■■□□□ 1.9
PBX3-205ENST00000373492 CCDC144AA2RUR9 1427 aa26.93■■□□□ 1.9
PBX3-205ENST00000373492 SLC26A8Q96RN1 970 aa26.93■■□□□ 1.9
PBX3-205ENST00000373492 NUTM2DQ5VT03 806 aaPredicted RBP26.91■■□□□ 1.9
PBX3-205ENST00000373492 KCNA6P17658 529 aa26.88■■□□□ 1.89
PBX3-205ENST00000373492 TBX22Q9Y458 520 aa26.88■■□□□ 1.89
PBX3-205ENST00000373492 STRCP1A6NGW2 1772 aa26.87■■□□□ 1.89
PBX3-205ENST00000373492 ANKRD30BQ9BXX2 1392 aa26.85■■□□□ 1.89
PBX3-205ENST00000373492 PPLO60437 1756 aa26.85■■□□□ 1.89
PBX3-205ENST00000373492 RPGRIP1LQ68CZ1 1315 aa26.85■■□□□ 1.89
PBX3-205ENST00000373492 LRRC7Q96NW7 1537 aa26.85■■□□□ 1.89
PBX3-205ENST00000373492 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
PBX3-205ENST00000373492 ADAMTS13Q76LX8 1427 aa26.83■■□□□ 1.89
PBX3-205ENST00000373492 NEXMIFQ5QGS0 1516 aa26.83■■□□□ 1.89
PBX3-205ENST00000373492 DIP2AQ14689 1571 aa26.83■■□□□ 1.89
PBX3-205ENST00000373492 UBAP1LF5GYI3 381 aa26.81■■□□□ 1.88
PBX3-205ENST00000373492 IFT172Q9UG01 1749 aa26.81■■□□□ 1.88
PBX3-205ENST00000373492 VGFO15240 615 aaPredicted RBP26.8■■□□□ 1.88
PBX3-205ENST00000373492 DHX57Q6P158 1386 aaKnown RBP26.8■■□□□ 1.88
PBX3-205ENST00000373492 PIK3R4Q99570 1358 aa26.8■■□□□ 1.88
PBX3-205ENST00000373492 SETBP1Q9Y6X0 1596 aa26.79■■□□□ 1.88
PBX3-205ENST00000373492 NWD1Q149M9 1564 aa26.78■■□□□ 1.88
PBX3-205ENST00000373492 TOM1O60784 492 aa26.77■■□□□ 1.88
PBX3-205ENST00000373492 NKTRP30414 1462 aaKnown RBP26.76■■□□□ 1.87
PBX3-205ENST00000373492 SPATA31E1Q6ZUB1 1445 aa26.76■■□□□ 1.87
PBX3-205ENST00000373492 PROSER2Q86WR7 435 aaPredicted RBP26.74■■□□□ 1.87
PBX3-205ENST00000373492 CHD2O14647 1828 aaKnown RBP26.74■■□□□ 1.87
PBX3-205ENST00000373492 NRXN3Q9Y4C0 1643 aa26.73■■□□□ 1.87
PBX3-205ENST00000373492 RGL3Q3MIN7 710 aa26.72■■□□□ 1.87
PBX3-205ENST00000373492 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
PBX3-205ENST00000373492 AMOTL2Q9Y2J4 779 aa26.68■■□□□ 1.86
PBX3-205ENST00000373492 XIRP1Q702N8 1843 aaKnown RBP26.66■■□□□ 1.86
PBX3-205ENST00000373492 METP08581 1390 aa26.66■■□□□ 1.86
PBX3-205ENST00000373492 PTPRUQ92729 1446 aa26.65■■□□□ 1.86
PBX3-205ENST00000373492 NCOA3Q9Y6Q9 1424 aa26.65■■□□□ 1.86
PBX3-205ENST00000373492 RBM33Q96EV2 1170 aaKnown RBP26.63■■□□□ 1.85
PBX3-205ENST00000373492 ALKQ9UM73 1620 aa26.63■■□□□ 1.85
PBX3-205ENST00000373492 ADGRF5Q8IZF2 1346 aa26.63■■□□□ 1.85
PBX3-205ENST00000373492 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
PBX3-205ENST00000373492 SCAF1Q9H7N4 1312 aaKnown RBP26.6■■□□□ 1.85
PBX3-205ENST00000373492 MSH6P52701 1360 aa26.59■■□□□ 1.85
PBX3-205ENST00000373492 MYOM2P54296 1465 aa26.58■■□□□ 1.85
PBX3-205ENST00000373492 SETD1AO15047 1707 aaKnown RBP26.58■■□□□ 1.85
PBX3-205ENST00000373492 XRN1Q8IZH2 1706 aaKnown RBP26.58■■□□□ 1.85
PBX3-205ENST00000373492 SIN3AQ96ST3 1273 aa26.56■■□□□ 1.84
PBX3-205ENST00000373492 LAMC1P11047 1609 aa26.55■■□□□ 1.84
PBX3-205ENST00000373492 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
PBX3-205ENST00000373492 PIK3C2GO75747 1445 aa26.55■■□□□ 1.84
PBX3-205ENST00000373492 C14orf37Q86TY3 774 aa26.53■■□□□ 1.84
PBX3-205ENST00000373492 DCAF11Q8TEB1 546 aa26.53■■□□□ 1.84
PBX3-205ENST00000373492 STAC3Q96MF2 364 aa26.53■■□□□ 1.84
PBX3-205ENST00000373492 C19orf44Q9H6X5 657 aa26.53■■□□□ 1.84
PBX3-205ENST00000373492 NRXN1Q9ULB1 1477 aa26.52■■□□□ 1.84
PBX3-205ENST00000373492 PRAG1Q86YV5 1406 aa26.5■■□□□ 1.83
PBX3-205ENST00000373492 PTCH1Q13635 1447 aa26.49■■□□□ 1.83
PBX3-205ENST00000373492 KDM2AQ9Y2K7 1162 aa26.49■■□□□ 1.83
PBX3-205ENST00000373492 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
PBX3-205ENST00000373492 CLSPNQ9HAW4 1339 aa26.48■■□□□ 1.83
PBX3-205ENST00000373492 HSPA1LP34931 641 aa26.48■■□□□ 1.83
PBX3-205ENST00000373492 CADPS2Q86UW7 1296 aa26.48■■□□□ 1.83
PBX3-205ENST00000373492 C14orf93Q9H972 538 aaKnown RBP26.48■■□□□ 1.83
PBX3-205ENST00000373492 SLAIN2Q9P270 581 aa26.47■■□□□ 1.83
PBX3-205ENST00000373492 ATF3P18847 181 aa26.46■■□□□ 1.83
PBX3-205ENST00000373492 CCER1Q8TC90 406 aaPredicted RBP26.46■■□□□ 1.83
PBX3-205ENST00000373492 KIAA1210Q9ULL0 1709 aa26.45■■□□□ 1.82
PBX3-205ENST00000373492 ROBO2Q9HCK4 1378 aa26.45■■□□□ 1.82
PBX3-205ENST00000373492 DCCP43146 1447 aa26.44■■□□□ 1.82
PBX3-205ENST00000373492 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.43■■□□□ 1.82
PBX3-205ENST00000373492 LRPPRCP42704 1394 aaKnown RBP26.43■■□□□ 1.82
PBX3-205ENST00000373492 TONSLQ96HA7 1378 aa26.43■■□□□ 1.82
PBX3-205ENST00000373492 ADGRL3Q9HAR2 1447 aa26.41■■□□□ 1.82
PBX3-205ENST00000373492 CFAP70Q5T0N1 1121 aa26.41■■□□□ 1.82
PBX3-205ENST00000373492 TMEM132EQ6IEE7 984 aa26.41■■□□□ 1.82
PBX3-205ENST00000373492 L3MBTL2Q969R5 705 aa26.41■■□□□ 1.82
PBX3-205ENST00000373492 ABCC11Q96J66 1382 aa26.41■■□□□ 1.82
PBX3-205ENST00000373492 TECPR2O15040 1411 aa26.4■■□□□ 1.82
PBX3-205ENST00000373492 KNDC1Q76NI1 1749 aa26.39■■□□□ 1.82
PBX3-205ENST00000373492 ASXL1Q8IXJ9 1541 aa26.39■■□□□ 1.81
PBX3-205ENST00000373492 STK26Q9P289 416 aa26.38■■□□□ 1.81
PBX3-205ENST00000373492 YTHDC2Q9H6S0 1430 aaKnown RBP26.38■■□□□ 1.81
PBX3-205ENST00000373492 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
PBX3-205ENST00000373492 SIRT1Q96EB6 747 aa26.36■■□□□ 1.81
PBX3-205ENST00000373492 TRPM1Q7Z4N2 1603 aa26.33■■□□□ 1.81
PBX3-205ENST00000373492 NALCNQ8IZF0 1738 aa26.32■■□□□ 1.8
PBX3-205ENST00000373492 MST1RQ04912 1400 aa26.31■■□□□ 1.8
PBX3-205ENST00000373492 WAPLQ7Z5K2 1190 aa26.3■■□□□ 1.8
PBX3-205ENST00000373492 ADGRB1O14514 1584 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms