RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 ERBINQ96RT1 1412 aa23.65■■□□□ 1.38
MMP9-201ENST00000372330 MAGI2Q86UL8 1455 aa23.65■■□□□ 1.38
MMP9-201ENST00000372330 SKAP1Q86WV1 359 aa23.64■■□□□ 1.38
MMP9-201ENST00000372330 WDR7Q9Y4E6 1490 aa23.63■■□□□ 1.37
MMP9-201ENST00000372330 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
MMP9-201ENST00000372330 ATP10AO60312 1499 aa23.63■■□□□ 1.37
MMP9-201ENST00000372330 A2MP01023 1474 aa23.63■■□□□ 1.37
MMP9-201ENST00000372330 ABCC1P33527 1531 aa23.62■■□□□ 1.37
MMP9-201ENST00000372330 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
MMP9-201ENST00000372330 BECN1Q14457 450 aa23.61■■□□□ 1.37
MMP9-201ENST00000372330 PLIN1O60240 522 aa23.61■■□□□ 1.37
MMP9-201ENST00000372330 ZMYM4Q5VZL5 1548 aa23.59■■□□□ 1.37
MMP9-201ENST00000372330 NLRP13Q86W25 1043 aa23.59■■□□□ 1.37
MMP9-201ENST00000372330 TRAPPC8Q9Y2L5 1435 aa23.59■■□□□ 1.37
MMP9-201ENST00000372330 E9PCH4 1651 aa23.59■■□□□ 1.37
MMP9-201ENST00000372330 GOLGA6L3A6NEY3 463 aa23.59■■□□□ 1.37
MMP9-201ENST00000372330 NBPF1Q3BBV0 1214 aa23.58■■□□□ 1.36
MMP9-201ENST00000372330 CENPJQ9HC77 1338 aaPredicted RBP23.57■■□□□ 1.36
MMP9-201ENST00000372330 FSD2A1L4K1 749 aa23.57■■□□□ 1.36
MMP9-201ENST00000372330 XRCC6P12956 609 aaKnown RBP eCLIP23.57■■□□□ 1.36
MMP9-201ENST00000372330 CDCA7LQ96GN5 454 aa23.56■■□□□ 1.36
MMP9-201ENST00000372330 LAMC1P11047 1609 aa23.56■■□□□ 1.36
MMP9-201ENST00000372330 ARAP3Q8WWN8 1544 aa23.55■■□□□ 1.36
MMP9-201ENST00000372330 ASXL2Q76L83 1435 aa23.54■■□□□ 1.36
MMP9-201ENST00000372330 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
MMP9-201ENST00000372330 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
MMP9-201ENST00000372330 PRDM15P57071 1507 aaPredicted RBP23.53■■□□□ 1.36
MMP9-201ENST00000372330 ABCA9Q8IUA7 1624 aa23.52■■□□□ 1.36
MMP9-201ENST00000372330 PDCL3Q9H2J4 239 aa23.52■■□□□ 1.36
MMP9-201ENST00000372330 TPM2P07951 284 aa23.5■■□□□ 1.35
MMP9-201ENST00000372330 RTEL1-TNFRSF6BF6WH68 1400 aa23.5■■□□□ 1.35
MMP9-201ENST00000372330 FANCAO15360 1455 aa23.49■■□□□ 1.35
MMP9-201ENST00000372330 SPAG9O60271 1321 aaKnown RBP23.49■■□□□ 1.35
MMP9-201ENST00000372330 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
MMP9-201ENST00000372330 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.48■■□□□ 1.35
MMP9-201ENST00000372330 TESK2Q96S53 571 aa23.48■■□□□ 1.35
MMP9-201ENST00000372330 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
MMP9-201ENST00000372330 MRE11P49959 708 aa23.47■■□□□ 1.35
MMP9-201ENST00000372330 ANTXR1Q9H6X2 564 aa23.47■■□□□ 1.35
MMP9-201ENST00000372330 ISY1Q9ULR0 285 aaKnown RBP23.47■■□□□ 1.35
MMP9-201ENST00000372330 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
MMP9-201ENST00000372330 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
MMP9-201ENST00000372330 USP19O94966 1318 aa23.46■■□□□ 1.35
MMP9-201ENST00000372330 C20orf194Q5TEA3 1177 aa23.45■■□□□ 1.35
MMP9-201ENST00000372330 PER1O15534 1290 aaPredicted RBP23.45■■□□□ 1.34
MMP9-201ENST00000372330 NPM1P06748 294 aaKnown RBP eCLIP23.45■■□□□ 1.34
MMP9-201ENST00000372330 RGS3P49796 1198 aa23.43■■□□□ 1.34
MMP9-201ENST00000372330 CALD1Q05682 793 aaKnown RBP23.43■■□□□ 1.34
MMP9-201ENST00000372330 DISP3Q9P2K9 1392 aa23.43■■□□□ 1.34
MMP9-201ENST00000372330 ESPNB1AK53 854 aa23.43■■□□□ 1.34
MMP9-201ENST00000372330 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
MMP9-201ENST00000372330 VIRMAQ69YN4 1812 aaKnown RBP23.4■■□□□ 1.34
MMP9-201ENST00000372330 ADGRL1O94910 1474 aa23.4■■□□□ 1.34
MMP9-201ENST00000372330 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
MMP9-201ENST00000372330 MYH16Q9H6N6 1097 aa23.4■■□□□ 1.34
MMP9-201ENST00000372330 TRPM2O94759 1503 aa23.4■■□□□ 1.34
MMP9-201ENST00000372330 SCAPERQ9BY12 1400 aa23.39■■□□□ 1.34
MMP9-201ENST00000372330 TMF1P82094 1093 aa23.39■■□□□ 1.34
MMP9-201ENST00000372330 PANK2Q9BZ23 570 aa23.38■■□□□ 1.33
MMP9-201ENST00000372330 DEPDC5O75140 1603 aa23.38■■□□□ 1.33
MMP9-201ENST00000372330 PTPRTO14522 1441 aa23.38■■□□□ 1.33
MMP9-201ENST00000372330 ATP7AQ04656 1500 aa23.37■■□□□ 1.33
MMP9-201ENST00000372330 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
MMP9-201ENST00000372330 MCM4P33991 863 aa23.36■■□□□ 1.33
MMP9-201ENST00000372330 INO80Q9ULG1 1556 aaPredicted RBP23.36■■□□□ 1.33
MMP9-201ENST00000372330 MAPK8IP3Q9UPT6 1336 aa23.36■■□□□ 1.33
MMP9-201ENST00000372330 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
MMP9-201ENST00000372330 EIF3AQ14152 1382 aaKnown RBP23.35■■□□□ 1.33
MMP9-201ENST00000372330 STAC3Q96MF2 364 aa23.34■■□□□ 1.33
MMP9-201ENST00000372330 PANK3Q9H999 370 aa23.34■■□□□ 1.33
MMP9-201ENST00000372330 SPHKAPQ2M3C7 1700 aa23.34■■□□□ 1.33
MMP9-201ENST00000372330 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
MMP9-201ENST00000372330 CEP152O94986 1710 aa23.32■■□□□ 1.32
MMP9-201ENST00000372330 TET3O43151 1660 aa23.32■■□□□ 1.32
MMP9-201ENST00000372330 KANK1Q14678 1352 aa23.31■■□□□ 1.32
MMP9-201ENST00000372330 TRIM44Q96DX7 344 aaPredicted RBP23.31■■□□□ 1.32
MMP9-201ENST00000372330 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
MMP9-201ENST00000372330 GRPEL1Q9HAV7 217 aa23.31■■□□□ 1.32
MMP9-201ENST00000372330 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
MMP9-201ENST00000372330 CC2D1BQ5T0F9 858 aaKnown RBP23.3■■□□□ 1.32
MMP9-201ENST00000372330 CD109Q6YHK3 1445 aa23.29■■□□□ 1.32
MMP9-201ENST00000372330 TRAK2O60296 914 aa23.29■■□□□ 1.32
MMP9-201ENST00000372330 DUSP27Q5VZP5 1158 aa23.29■■□□□ 1.32
MMP9-201ENST00000372330 ARXQ96QS3 562 aa23.29■■□□□ 1.32
MMP9-201ENST00000372330 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
MMP9-201ENST00000372330 MAP7D2Q96T17 732 aa23.27■■□□□ 1.32
MMP9-201ENST00000372330 PRDM4Q9UKN5 801 aa23.27■■□□□ 1.32
MMP9-201ENST00000372330 NLRP1Q9C000 1473 aa23.27■■□□□ 1.32
MMP9-201ENST00000372330 KIF3BO15066 747 aa23.27■■□□□ 1.32
MMP9-201ENST00000372330 TERF1P54274 439 aa23.27■■□□□ 1.32
MMP9-201ENST00000372330 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
MMP9-201ENST00000372330 GZF1Q9H116 711 aaPredicted RBP23.26■■□□□ 1.31
MMP9-201ENST00000372330 KIDINS220Q9ULH0 1771 aa23.25■■□□□ 1.31
MMP9-201ENST00000372330 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
MMP9-201ENST00000372330 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
MMP9-201ENST00000372330 SEC24BO95487 1268 aa23.25■■□□□ 1.31
MMP9-201ENST00000372330 CHMP5Q9NZZ3 219 aa23.24■■□□□ 1.31
MMP9-201ENST00000372330 TBC1D32Q96NH3 1257 aa23.24■■□□□ 1.31
MMP9-201ENST00000372330 MROH1Q8NDA8 1641 aa23.23■■□□□ 1.31
MMP9-201ENST00000372330 ERBB4Q15303 1308 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms