RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 BACH2Q9BYV9 841 aa18.31■□□□□ 0.52
RNF220-204ENST00000372247 KDM5AP29375 1690 aaKnown RBP18.31■□□□□ 0.52
RNF220-204ENST00000372247 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
RNF220-204ENST00000372247 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
RNF220-204ENST00000372247 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
RNF220-204ENST00000372247 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
RNF220-204ENST00000372247 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
RNF220-204ENST00000372247 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
RNF220-204ENST00000372247 CDCA8Q53HL2 280 aa18.27■□□□□ 0.52
RNF220-204ENST00000372247 CDCA7LQ96GN5 454 aa18.27■□□□□ 0.52
RNF220-204ENST00000372247 LMTK2Q8IWU2 1503 aa18.27■□□□□ 0.51
RNF220-204ENST00000372247 RGL3Q3MIN7 710 aa18.27■□□□□ 0.51
RNF220-204ENST00000372247 PDE4AP27815 886 aa18.26■□□□□ 0.51
RNF220-204ENST00000372247 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
RNF220-204ENST00000372247 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
RNF220-204ENST00000372247 ATP7AQ04656 1500 aa18.25■□□□□ 0.51
RNF220-204ENST00000372247 DEKP35659 375 aaKnown RBP18.25■□□□□ 0.51
RNF220-204ENST00000372247 SBNO2Q9Y2G9 1366 aa18.25■□□□□ 0.51
RNF220-204ENST00000372247 ABCA6Q8N139 1617 aa18.25■□□□□ 0.51
RNF220-204ENST00000372247 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
RNF220-204ENST00000372247 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
RNF220-204ENST00000372247 SETBP1Q9Y6X0 1596 aa18.24■□□□□ 0.51
RNF220-204ENST00000372247 PLEKHH1Q9ULM0 1364 aa18.24■□□□□ 0.51
RNF220-204ENST00000372247 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
RNF220-204ENST00000372247 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
RNF220-204ENST00000372247 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
RNF220-204ENST00000372247 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
RNF220-204ENST00000372247 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
RNF220-204ENST00000372247 EFCAB6Q5THR3 1501 aa18.22■□□□□ 0.51
RNF220-204ENST00000372247 USP35Q9P2H5 1018 aa18.21■□□□□ 0.51
RNF220-204ENST00000372247 ZC3H13Q5T200 1668 aaKnown RBP18.21■□□□□ 0.51
RNF220-204ENST00000372247 USP32Q8NFA0 1604 aa18.21■□□□□ 0.5
RNF220-204ENST00000372247 ADAMTS8Q9UP79 889 aa18.2■□□□□ 0.5
RNF220-204ENST00000372247 ERVK-7P63135 1459 aa18.2■□□□□ 0.5
RNF220-204ENST00000372247 KIF1BO60333 1816 aa18.2■□□□□ 0.5
RNF220-204ENST00000372247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.57e-7■■□□□ 13.4
RNF220-204ENST00000372247 CRBNQ96SW2 442 aa18.18■□□□□ 0.5
RNF220-204ENST00000372247 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
RNF220-204ENST00000372247 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
RNF220-204ENST00000372247 SPAG9O60271 1321 aaKnown RBP18.17■□□□□ 0.5
RNF220-204ENST00000372247 FANCAO15360 1455 aa18.17■□□□□ 0.5
RNF220-204ENST00000372247 ADGRB3O60242 1522 aa18.17■□□□□ 0.5
RNF220-204ENST00000372247 MROH2AA6NES4 1674 aa18.16■□□□□ 0.5
RNF220-204ENST00000372247 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
RNF220-204ENST00000372247 SLFN5Q08AF3 891 aa18.15■□□□□ 0.5
RNF220-204ENST00000372247 SHPRHQ149N8 1683 aa18.14■□□□□ 0.49
RNF220-204ENST00000372247 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
RNF220-204ENST00000372247 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.49
RNF220-204ENST00000372247 KANK1Q14678 1352 aa18.13■□□□□ 0.49
RNF220-204ENST00000372247 SENP3-EIF4A1A0A087X0R7 540 aa18.13■□□□□ 0.49
RNF220-204ENST00000372247 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
RNF220-204ENST00000372247 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
RNF220-204ENST00000372247 NINLQ9Y2I6 1382 aa18.12■□□□□ 0.49
RNF220-204ENST00000372247 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
RNF220-204ENST00000372247 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
RNF220-204ENST00000372247 PPLO60437 1756 aa18.11■□□□□ 0.49
RNF220-204ENST00000372247 PLIN1O60240 522 aa18.1■□□□□ 0.49
RNF220-204ENST00000372247 WDR43Q15061 677 aaKnown RBP eCLIP18.1■□□□□ 0.49
RNF220-204ENST00000372247 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.09■□□□□ 0.49
RNF220-204ENST00000372247 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
RNF220-204ENST00000372247 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
RNF220-204ENST00000372247 C20orf194Q5TEA3 1177 aa18.09■□□□□ 0.49
RNF220-204ENST00000372247 SALL2Q9Y467 1007 aaPredicted RBP18.09■□□□□ 0.49
RNF220-204ENST00000372247 IQSEC2Q5JU85 1478 aa18.08■□□□□ 0.48
RNF220-204ENST00000372247 ADGRB1O14514 1584 aa18.08■□□□□ 0.48
RNF220-204ENST00000372247 NBR1Q14596 966 aa18.06■□□□□ 0.48
RNF220-204ENST00000372247 ZMYM3Q14202 1370 aa18.06■□□□□ 0.48
RNF220-204ENST00000372247 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
RNF220-204ENST00000372247 ADGRL1O94910 1474 aa18.05■□□□□ 0.48
RNF220-204ENST00000372247 UGGT1Q9NYU2 1555 aa18.05■□□□□ 0.48
RNF220-204ENST00000372247 CFAP74Q9C0B2 1584 aa18.04■□□□□ 0.48
RNF220-204ENST00000372247 E9PSI1 815 aa18.04■□□□□ 0.48
RNF220-204ENST00000372247 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
RNF220-204ENST00000372247 QRICH2Q9H0J4 1663 aa18.04■□□□□ 0.48
RNF220-204ENST00000372247 C8orf34Q49A92 452 aa18.04■□□□□ 0.48
RNF220-204ENST00000372247 ZNF518AQ6AHZ1 1483 aa18.03■□□□□ 0.48
RNF220-204ENST00000372247 FAM161AQ3B820 660 aa18.02■□□□□ 0.48
RNF220-204ENST00000372247 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.48
RNF220-204ENST00000372247 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
RNF220-204ENST00000372247 HECW2Q9P2P5 1572 aa18.02■□□□□ 0.48
RNF220-204ENST00000372247 PIK3C2BO00750 1634 aa18.02■□□□□ 0.48
RNF220-204ENST00000372247 FRMPD1Q5SYB0 1578 aa18.01■□□□□ 0.47
RNF220-204ENST00000372247 AAMPQ13685 434 aa18.01■□□□□ 0.47
RNF220-204ENST00000372247 PDE3AQ14432 1141 aa18.01■□□□□ 0.47
RNF220-204ENST00000372247 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
RNF220-204ENST00000372247 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
RNF220-204ENST00000372247 MLH3Q9UHC1 1453 aa17.99■□□□□ 0.47
RNF220-204ENST00000372247 ADGRF5Q8IZF2 1346 aa17.98■□□□□ 0.47
RNF220-204ENST00000372247 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
RNF220-204ENST00000372247 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.47
RNF220-204ENST00000372247 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
RNF220-204ENST00000372247 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
RNF220-204ENST00000372247 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
RNF220-204ENST00000372247 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
RNF220-204ENST00000372247 APAF1O14727 1248 aa17.94■□□□□ 0.46
RNF220-204ENST00000372247 CCDC27Q2M243 656 aa17.94■□□□□ 0.46
RNF220-204ENST00000372247 NSD2O96028 1365 aa17.94■□□□□ 0.46
RNF220-204ENST00000372247 NOS1P29475 1434 aa17.93■□□□□ 0.46
RNF220-204ENST00000372247 NPATQ14207 1427 aa17.93■□□□□ 0.46
RNF220-204ENST00000372247 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms