RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 ADAMTS8Q9UP79 889 aa25.32■■□□□ 1.64
TMEM53-202ENST00000372237 SCAF11Q99590 1463 aaKnown RBP25.32■■□□□ 1.64
TMEM53-202ENST00000372237 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
TMEM53-202ENST00000372237 PTPRTO14522 1441 aa25.31■■□□□ 1.64
TMEM53-202ENST00000372237 CLTCL1P53675 1640 aa25.3■■□□□ 1.64
TMEM53-202ENST00000372237 PLIN1O60240 522 aa25.3■■□□□ 1.64
TMEM53-202ENST00000372237 PPP2R1AP30153 589 aa25.29■■□□□ 1.64
TMEM53-202ENST00000372237 BCL11AQ9H165 835 aa25.29■■□□□ 1.64
TMEM53-202ENST00000372237 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
TMEM53-202ENST00000372237 SYNMO15061 1565 aa25.29■■□□□ 1.64
TMEM53-202ENST00000372237 ZNF518AQ6AHZ1 1483 aa25.28■■□□□ 1.64
TMEM53-202ENST00000372237 TET3O43151 1660 aa25.28■■□□□ 1.64
TMEM53-202ENST00000372237 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
TMEM53-202ENST00000372237 KIF3BO15066 747 aa25.27■■□□□ 1.64
TMEM53-202ENST00000372237 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
TMEM53-202ENST00000372237 ZBTB47Q9UFB7 747 aaPredicted RBP25.26■■□□□ 1.63
TMEM53-202ENST00000372237 KANK1Q14678 1352 aa25.26■■□□□ 1.63
TMEM53-202ENST00000372237 EIF3AQ14152 1382 aaKnown RBP25.24■■□□□ 1.63
TMEM53-202ENST00000372237 ASXL1Q8IXJ9 1541 aa25.23■■□□□ 1.63
TMEM53-202ENST00000372237 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
TMEM53-202ENST00000372237 KIDINS220Q9ULH0 1771 aa25.22■■□□□ 1.63
TMEM53-202ENST00000372237 POGZQ7Z3K3 1410 aa25.22■■□□□ 1.63
TMEM53-202ENST00000372237 CFAP74Q9C0B2 1584 aa25.22■■□□□ 1.63
TMEM53-202ENST00000372237 NBR1Q14596 966 aa25.21■■□□□ 1.63
TMEM53-202ENST00000372237 PDE4AP27815 886 aa25.21■■□□□ 1.63
TMEM53-202ENST00000372237 MS4A1P11836 297 aa25.2■■□□□ 1.63
TMEM53-202ENST00000372237 MYOM1P52179 1685 aa25.2■■□□□ 1.62
TMEM53-202ENST00000372237 PLEKHH1Q9ULM0 1364 aa25.19■■□□□ 1.62
TMEM53-202ENST00000372237 KIAA1210Q9ULL0 1709 aa25.19■■□□□ 1.62
TMEM53-202ENST00000372237 VWDEQ8N2E2 1590 aa25.19■■□□□ 1.62
TMEM53-202ENST00000372237 NPM2Q86SE8 214 aaKnown RBP25.18■■□□□ 1.62
TMEM53-202ENST00000372237 PIK3C2GO75747 1445 aa25.18■■□□□ 1.62
TMEM53-202ENST00000372237 KDM5AP29375 1690 aaKnown RBP25.17■■□□□ 1.62
TMEM53-202ENST00000372237 NEO1Q92859 1461 aa25.17■■□□□ 1.62
TMEM53-202ENST00000372237 MLH3Q9UHC1 1453 aa25.17■■□□□ 1.62
TMEM53-202ENST00000372237 BACH2Q9BYV9 841 aa25.17■■□□□ 1.62
TMEM53-202ENST00000372237 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
TMEM53-202ENST00000372237 DUSP27Q5VZP5 1158 aa25.16■■□□□ 1.62
TMEM53-202ENST00000372237 RIMBP3CA6NJZ7 1639 aa25.16■■□□□ 1.62
TMEM53-202ENST00000372237 RIMBP3BA6NNM3 1639 aa25.16■■□□□ 1.62
TMEM53-202ENST00000372237 RIMBP3Q9UFD9 1639 aa25.16■■□□□ 1.62
TMEM53-202ENST00000372237 NEURL4Q96JN8 1562 aa25.14■■□□□ 1.62
TMEM53-202ENST00000372237 GOLGA2Q08379 1002 aa25.14■■□□□ 1.62
TMEM53-202ENST00000372237 MROH1Q8NDA8 1641 aa25.14■■□□□ 1.61
TMEM53-202ENST00000372237 ZNF521Q96K83 1311 aa25.13■■□□□ 1.61
TMEM53-202ENST00000372237 RAPGEF3O95398 923 aa25.13■■□□□ 1.61
TMEM53-202ENST00000372237 C20orf194Q5TEA3 1177 aa25.13■■□□□ 1.61
TMEM53-202ENST00000372237 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
TMEM53-202ENST00000372237 DEKP35659 375 aaKnown RBP25.12■■□□□ 1.61
TMEM53-202ENST00000372237 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
TMEM53-202ENST00000372237 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
TMEM53-202ENST00000372237 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
TMEM53-202ENST00000372237 MYOM2P54296 1465 aa25.1■■□□□ 1.61
TMEM53-202ENST00000372237 KIF1BO60333 1816 aa25.09■■□□□ 1.61
TMEM53-202ENST00000372237 ABCA6Q8N139 1617 aa25.09■■□□□ 1.61
TMEM53-202ENST00000372237 ADGRF5Q8IZF2 1346 aa25.08■■□□□ 1.61
TMEM53-202ENST00000372237 HECW2Q9P2P5 1572 aa25.08■■□□□ 1.61
TMEM53-202ENST00000372237 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.07■■□□□ 1.6
TMEM53-202ENST00000372237 ERVK-7P63135 1459 aa25.07■■□□□ 1.6
TMEM53-202ENST00000372237 CCDC146Q8IYE0 955 aa25.07■■□□□ 1.6
TMEM53-202ENST00000372237 FRMPD1Q5SYB0 1578 aa25.06■■□□□ 1.6
TMEM53-202ENST00000372237 SLFN5Q08AF3 891 aa25.06■■□□□ 1.6
TMEM53-202ENST00000372237 SKAP1Q86WV1 359 aa25.05■■□□□ 1.6
TMEM53-202ENST00000372237 GLI2P10070 1586 aa25.05■■□□□ 1.6
TMEM53-202ENST00000372237 RTL5Q5HYW3 569 aaPredicted RBP25.04■■□□□ 1.6
TMEM53-202ENST00000372237 EFCAB6Q5THR3 1501 aa25.04■■□□□ 1.6
TMEM53-202ENST00000372237 KDM2BQ8NHM5 1336 aa25.03■■□□□ 1.6
TMEM53-202ENST00000372237 IFT172Q9UG01 1749 aa25.03■■□□□ 1.6
TMEM53-202ENST00000372237 FAM69CQ0P6D2 419 aa25.02■■□□□ 1.6
TMEM53-202ENST00000372237 APAF1O14727 1248 aa25.02■■□□□ 1.6
TMEM53-202ENST00000372237 LMTK2Q8IWU2 1503 aa25.02■■□□□ 1.6
TMEM53-202ENST00000372237 GGT6Q6P531 493 aa25.01■■□□□ 1.59
TMEM53-202ENST00000372237 CENPQQ7L2Z9 268 aaPredicted RBP25.01■■□□□ 1.59
TMEM53-202ENST00000372237 MROH2AA6NES4 1674 aa25■■□□□ 1.59
TMEM53-202ENST00000372237 TRMT2AQ8IZ69 625 aaKnown RBP25■■□□□ 1.59
TMEM53-202ENST00000372237 CARD14Q9BXL6 1004 aa25■■□□□ 1.59
TMEM53-202ENST00000372237 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
TMEM53-202ENST00000372237 NKTRP30414 1462 aaKnown RBP24.97■■□□□ 1.59
TMEM53-202ENST00000372237 MYO3AQ8NEV4 1616 aa24.97■■□□□ 1.59
TMEM53-202ENST00000372237 SPINK5Q9NQ38 1064 aaPredicted RBP24.96■■□□□ 1.59
TMEM53-202ENST00000372237 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
TMEM53-202ENST00000372237 SBNO2Q9Y2G9 1366 aa24.96■■□□□ 1.59
TMEM53-202ENST00000372237 E9PSI1 815 aa24.94■■□□□ 1.58
TMEM53-202ENST00000372237 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
TMEM53-202ENST00000372237 NOS1P29475 1434 aa24.94■■□□□ 1.58
TMEM53-202ENST00000372237 RICTORQ6R327 1708 aa24.94■■□□□ 1.58
TMEM53-202ENST00000372237 CENPJQ9HC77 1338 aaPredicted RBP24.93■■□□□ 1.58
TMEM53-202ENST00000372237 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
TMEM53-202ENST00000372237 DIP2CQ9Y2E4 1556 aa24.93■■□□□ 1.58
TMEM53-202ENST00000372237 NPATQ14207 1427 aa24.92■■□□□ 1.58
TMEM53-202ENST00000372237 NGEFQ8N5V2 710 aa24.92■■□□□ 1.58
TMEM53-202ENST00000372237 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
TMEM53-202ENST00000372237 DDRGK1Q96HY6 314 aa24.91■■□□□ 1.58
TMEM53-202ENST00000372237 SETBP1Q9Y6X0 1596 aa24.91■■□□□ 1.58
TMEM53-202ENST00000372237 YEATS2Q9ULM3 1422 aa24.91■■□□□ 1.58
TMEM53-202ENST00000372237 LAS1LQ9Y4W2 734 aaKnown RBP24.9■■□□□ 1.58
TMEM53-202ENST00000372237 POLR3AO14802 1390 aaPredicted RBP24.89■■□□□ 1.58
TMEM53-202ENST00000372237 BCAR3O75815 825 aa24.89■■□□□ 1.57
TMEM53-202ENST00000372237 TRAK1Q9UPV9 953 aa24.89■■□□□ 1.57
TMEM53-202ENST00000372237 ABCC3O15438 1527 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms