RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ABCC10Q5T3U5 1492 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 TRAPPC8Q9Y2L5 1435 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 ADGBQ8N7X0 1667 aa6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 UHRF1BP1LA0JNW5 1464 aa6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 HSP90AA1P07900 732 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 BECN1Q14457 450 aa6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 LMOD2Q6P5Q4 547 aa6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 NGDNQ8NEJ9 315 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 PNISRQ8TF01 805 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 RTF1Q92541 710 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 COG3Q96JB2 828 aa6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 C11orf95C9JLR9 678 aaPredicted RBP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 TCERG1O14776 1098 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMNDC1-202ENST00000369603 A2MP01023 1474 aa6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 PPP2R1AP30153 589 aa6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 RRP1P56182 461 aaKnown RBP6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 CHMP4AQ9BY43 222 aa6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 SCAF11Q99590 1463 aaKnown RBP6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 POGZQ7Z3K3 1410 aa6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 APAF1O14727 1248 aa6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 RTN4Q9NQC3 1192 aaKnown RBP6.8□□□□□ -1.32
SMNDC1-202ENST00000369603 SOX12O15370 315 aa6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 RGS3P49796 1198 aa6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 RUNDC1Q96C34 613 aa6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 PRAG1Q86YV5 1406 aa6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 EIF2AK4Q9P2K8 1649 aaKnown RBP6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 DIAPH1O60610 1272 aaKnown RBP6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 TEX14Q8IWB6 1497 aa6.79□□□□□ -1.32
SMNDC1-202ENST00000369603 ATAD2Q6PL18 1390 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 PLEKHG5O94827 1062 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 PMFBP1Q8TBY8 1022 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 RWDD1Q9H446 243 aaPredicted RBP6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 CABP2Q9NPB3 220 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 PAK3O75914 559 aaPredicted RBP6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 UHRF1BP1Q6BDS2 1440 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 CHD1O14646 1710 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 MYO5CQ9NQX4 1742 aa6.78□□□□□ -1.32
SMNDC1-202ENST00000369603 PRAM1Q96QH2 718 aa6.77□□□□□ -1.32
SMNDC1-202ENST00000369603 SMC4Q9NTJ3 1288 aa6.77□□□□□ -1.32
SMNDC1-202ENST00000369603 MBD5Q9P267 1494 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 FANCIQ9NVI1 1328 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 AMPHP49418 695 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 CASC1Q6TDU7 716 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 ADGRF5Q8IZF2 1346 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 CFAP44Q96MT7 982 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 SLC12A5Q9H2X9 1139 aa6.77□□□□□ -1.33
SMNDC1-202ENST00000369603 THEMISQ8N1K5 641 aaPredicted RBP6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 ADCY10Q96PN6 1610 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 ATP7AQ04656 1500 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 SMG6Q86US8 1419 aaKnown RBP6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 MTHFSP49914 203 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 C14orf93Q9H972 538 aaKnown RBP6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 IDI1Q13907 227 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 CCDC184Q52MB2 194 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 TXNDC2Q86VQ3 553 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 RRP7AQ9Y3A4 280 aaKnown RBP6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 MAST1Q9Y2H9 1570 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 NOS1P29475 1434 aa6.76□□□□□ -1.33
SMNDC1-202ENST00000369603 CENPQQ7L2Z9 268 aaPredicted RBP6.75□□□□□ -1.33
SMNDC1-202ENST00000369603 GGNBP2Q9H3C7 697 aa6.75□□□□□ -1.33
SMNDC1-202ENST00000369603 PREX2Q70Z35 1606 aa6.75□□□□□ -1.33
SMNDC1-202ENST00000369603 NUTM2FA1L443 756 aa6.75□□□□□ -1.33
SMNDC1-202ENST00000369603 AAMPQ13685 434 aa6.75□□□□□ -1.33
SMNDC1-202ENST00000369603 ITPRIPQ8IWB1 547 aa6.75□□□□□ -1.33
SMNDC1-202ENST00000369603 ZNF692Q9BU19 519 aaPredicted RBP6.74□□□□□ -1.33
SMNDC1-202ENST00000369603 CDK19Q9BWU1 502 aa6.74□□□□□ -1.33
SMNDC1-202ENST00000369603 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
SMNDC1-202ENST00000369603 ZKSCAN2Q63HK3 967 aa6.74□□□□□ -1.33
SMNDC1-202ENST00000369603 EXOC6Q8TAG9 804 aa6.74□□□□□ -1.33
SMNDC1-202ENST00000369603 STK31Q9BXU1 1019 aa6.74□□□□□ -1.33
SMNDC1-202ENST00000369603 NINLQ9Y2I6 1382 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 NEO1Q92859 1461 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 RIPK4P57078 832 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 CFAP74Q9C0B2 1584 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 DISP3Q9P2K9 1392 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 TCP11L2Q8N4U5 519 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 CRBNQ96SW2 442 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 NSD3Q9BZ95 1437 aa6.73□□□□□ -1.33
SMNDC1-202ENST00000369603 PLIN1O60240 522 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 NSD2O96028 1365 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 CLUAP1Q96AJ1 413 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 PUS7Q96PZ0 661 aaKnown RBP6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 CABP1Q9NZU7 370 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 TTC37Q6PGP7 1564 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 GNAI1P63096 354 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 HDAC5Q9UQL6 1122 aa6.72□□□□□ -1.33
SMNDC1-202ENST00000369603 ZCCHC11Q5TAX3 1644 aaKnown RBP6.71□□□□□ -1.33
SMNDC1-202ENST00000369603 ABCC1P33527 1531 aa6.71□□□□□ -1.33
SMNDC1-202ENST00000369603 KDM6BO15054 1643 aa6.71□□□□□ -1.33
SMNDC1-202ENST00000369603 ARAP3Q8WWN8 1544 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 CDC42BPAQ5VT25 1732 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 GPRASP1Q5JY77 1395 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 TESK2Q96S53 571 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 FBXO31Q5XUX0 539 aaPredicted RBP6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 WDR63Q8IWG1 891 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms