RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 PLIN1O60240 522 aa13.71□□□□□ -0.21
LYSMD1-201ENST00000368908 CFDP1Q9UEE9 299 aaPredicted RBP13.71□□□□□ -0.21
LYSMD1-201ENST00000368908 POGZQ7Z3K3 1410 aa13.71□□□□□ -0.22
LYSMD1-201ENST00000368908 PRAG1Q86YV5 1406 aa13.7□□□□□ -0.22
LYSMD1-201ENST00000368908 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
LYSMD1-201ENST00000368908 EIF2AK4Q9P2K8 1649 aaKnown RBP13.69□□□□□ -0.22
LYSMD1-201ENST00000368908 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
LYSMD1-201ENST00000368908 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
LYSMD1-201ENST00000368908 NUP155O75694 1391 aa13.69□□□□□ -0.22
LYSMD1-201ENST00000368908 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
LYSMD1-201ENST00000368908 ARHGEF5Q12774 1597 aa13.68□□□□□ -0.22
LYSMD1-201ENST00000368908 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
LYSMD1-201ENST00000368908 MAGI2Q86UL8 1455 aa13.68□□□□□ -0.22
LYSMD1-201ENST00000368908 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
LYSMD1-201ENST00000368908 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
LYSMD1-201ENST00000368908 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
LYSMD1-201ENST00000368908 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
LYSMD1-201ENST00000368908 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
LYSMD1-201ENST00000368908 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
LYSMD1-201ENST00000368908 C20orf194Q5TEA3 1177 aa13.66□□□□□ -0.22
LYSMD1-201ENST00000368908 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
LYSMD1-201ENST00000368908 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
LYSMD1-201ENST00000368908 ARHGEF40Q8TER5 1519 aa13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 RSPH4AQ5TD94 716 aa13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 MLH3Q9UHC1 1453 aa13.64□□□□□ -0.23
LYSMD1-201ENST00000368908 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
LYSMD1-201ENST00000368908 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
LYSMD1-201ENST00000368908 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
LYSMD1-201ENST00000368908 L1TD1Q5T7N2 865 aaKnown RBP13.63□□□□□ -0.23
LYSMD1-201ENST00000368908 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
LYSMD1-201ENST00000368908 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
LYSMD1-201ENST00000368908 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
LYSMD1-201ENST00000368908 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
LYSMD1-201ENST00000368908 MAST1Q9Y2H9 1570 aa13.62□□□□□ -0.23
LYSMD1-201ENST00000368908 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
LYSMD1-201ENST00000368908 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
LYSMD1-201ENST00000368908 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
LYSMD1-201ENST00000368908 UNC13BO14795 1591 aa13.6□□□□□ -0.23
LYSMD1-201ENST00000368908 TESK2Q96S53 571 aa13.6□□□□□ -0.23
LYSMD1-201ENST00000368908 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
LYSMD1-201ENST00000368908 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
LYSMD1-201ENST00000368908 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
LYSMD1-201ENST00000368908 A2MP01023 1474 aa13.6□□□□□ -0.23
LYSMD1-201ENST00000368908 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
LYSMD1-201ENST00000368908 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
LYSMD1-201ENST00000368908 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
LYSMD1-201ENST00000368908 NINLQ9Y2I6 1382 aa13.59□□□□□ -0.23
LYSMD1-201ENST00000368908 GOLGA2Q08379 1002 aa13.58□□□□□ -0.23
LYSMD1-201ENST00000368908 BECN1Q14457 450 aa13.58□□□□□ -0.23
LYSMD1-201ENST00000368908 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.23
LYSMD1-201ENST00000368908 ATP7AQ04656 1500 aa13.58□□□□□ -0.23
LYSMD1-201ENST00000368908 USP19O94966 1318 aa13.58□□□□□ -0.24
LYSMD1-201ENST00000368908 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.24
LYSMD1-201ENST00000368908 SYNMO15061 1565 aa13.58□□□□□ -0.24
LYSMD1-201ENST00000368908 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
LYSMD1-201ENST00000368908 PIK3C2GO75747 1445 aa13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 TRMT2AQ8IZ69 625 aaKnown RBP13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 PANK3Q9H999 370 aa13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 DIP2CQ9Y2E4 1556 aa13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 ADAMTS8Q9UP79 889 aa13.57□□□□□ -0.24
LYSMD1-201ENST00000368908 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 ATP10AO60312 1499 aa13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 TMF1P82094 1093 aa13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
LYSMD1-201ENST00000368908 RGS3P49796 1198 aa13.55□□□□□ -0.24
LYSMD1-201ENST00000368908 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
LYSMD1-201ENST00000368908 POGKQ9P215 609 aa13.55□□□□□ -0.24
LYSMD1-201ENST00000368908 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
LYSMD1-201ENST00000368908 IQGAP3Q86VI3 1631 aa13.54□□□□□ -0.24
LYSMD1-201ENST00000368908 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
LYSMD1-201ENST00000368908 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
LYSMD1-201ENST00000368908 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
LYSMD1-201ENST00000368908 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
LYSMD1-201ENST00000368908 NBPF1Q3BBV0 1214 aa13.53□□□□□ -0.24
LYSMD1-201ENST00000368908 AGLP35573 1532 aa13.52□□□□□ -0.24
LYSMD1-201ENST00000368908 ASXL1Q8IXJ9 1541 aa13.52□□□□□ -0.24
LYSMD1-201ENST00000368908 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.24
LYSMD1-201ENST00000368908 TSPY4P0CV99 314 aa13.52□□□□□ -0.24
LYSMD1-201ENST00000368908 TSPY10P0CW01 314 aa13.52□□□□□ -0.24
LYSMD1-201ENST00000368908 NGEFQ8N5V2 710 aa13.52□□□□□ -0.24
LYSMD1-201ENST00000368908 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
LYSMD1-201ENST00000368908 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
LYSMD1-201ENST00000368908 MYOM1P52179 1685 aa13.51□□□□□ -0.25
LYSMD1-201ENST00000368908 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
LYSMD1-201ENST00000368908 AAMPQ13685 434 aa13.5□□□□□ -0.25
LYSMD1-201ENST00000368908 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
LYSMD1-201ENST00000368908 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
LYSMD1-201ENST00000368908 SIGLEC1Q9BZZ2 1709 aa13.48□□□□□ -0.25
LYSMD1-201ENST00000368908 E9PSI1 815 aa13.48□□□□□ -0.25
LYSMD1-201ENST00000368908 CLCN1P35523 988 aa13.48□□□□□ -0.25
LYSMD1-201ENST00000368908 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms