RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 H3BQV1 296 aa16.43■□□□□ 0.22
GOPC-202ENST00000368498 RRP9O43818 475 aaKnown RBP16.43■□□□□ 0.22
GOPC-202ENST00000368498 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
GOPC-202ENST00000368498 NPHP1O15259 732 aa16.43■□□□□ 0.22
GOPC-202ENST00000368498 RIPK4P57078 832 aa16.42■□□□□ 0.22
GOPC-202ENST00000368498 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
GOPC-202ENST00000368498 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
GOPC-202ENST00000368498 NOC3LQ8WTT2 800 aaKnown RBP16.41■□□□□ 0.22
GOPC-202ENST00000368498 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
GOPC-202ENST00000368498 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
GOPC-202ENST00000368498 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
GOPC-202ENST00000368498 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
GOPC-202ENST00000368498 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
GOPC-202ENST00000368498 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
GOPC-202ENST00000368498 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
GOPC-202ENST00000368498 EIF3AQ14152 1382 aaKnown RBP16.4■□□□□ 0.22
GOPC-202ENST00000368498 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
GOPC-202ENST00000368498 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
GOPC-202ENST00000368498 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
GOPC-202ENST00000368498 PDE4CQ08493 712 aa16.39■□□□□ 0.21
GOPC-202ENST00000368498 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
GOPC-202ENST00000368498 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
GOPC-202ENST00000368498 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
GOPC-202ENST00000368498 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
GOPC-202ENST00000368498 PES1O00541 588 aaKnown RBP16.37■□□□□ 0.21
GOPC-202ENST00000368498 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 UQCRHP07919 91 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 NEK4P51957 841 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 DIAPH3Q9NSV4 1193 aa16.37■□□□□ 0.21
GOPC-202ENST00000368498 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
GOPC-202ENST00000368498 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
GOPC-202ENST00000368498 SPC24Q8NBT2 197 aa16.36■□□□□ 0.21
GOPC-202ENST00000368498 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
GOPC-202ENST00000368498 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
GOPC-202ENST00000368498 FOSBP53539 338 aa16.36■□□□□ 0.21
GOPC-202ENST00000368498 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
GOPC-202ENST00000368498 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
GOPC-202ENST00000368498 TPM3P06753 285 aa16.35■□□□□ 0.21
GOPC-202ENST00000368498 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
GOPC-202ENST00000368498 KIF21BO75037 1637 aa16.35■□□□□ 0.21
GOPC-202ENST00000368498 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
GOPC-202ENST00000368498 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
GOPC-202ENST00000368498 EFCAB2Q5VUJ9 269 aa16.34■□□□□ 0.21
GOPC-202ENST00000368498 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
GOPC-202ENST00000368498 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
GOPC-202ENST00000368498 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
GOPC-202ENST00000368498 CDC45O75419 566 aa16.33■□□□□ 0.2
GOPC-202ENST00000368498 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
GOPC-202ENST00000368498 HMOX1P09601 288 aa16.32■□□□□ 0.2
GOPC-202ENST00000368498 FIBPO43427 364 aa16.32■□□□□ 0.2
GOPC-202ENST00000368498 MTHFSP49914 203 aa16.31■□□□□ 0.2
GOPC-202ENST00000368498 RASSF8Q8NHQ8 419 aa16.31■□□□□ 0.2
GOPC-202ENST00000368498 TRIM5Q9C035 493 aa16.31■□□□□ 0.2
GOPC-202ENST00000368498 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
GOPC-202ENST00000368498 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
GOPC-202ENST00000368498 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
GOPC-202ENST00000368498 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
GOPC-202ENST00000368498 TEX35Q5T0J7 233 aa16.31■□□□□ 0.2
GOPC-202ENST00000368498 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
GOPC-202ENST00000368498 KIF3AQ9Y496 699 aa16.3■□□□□ 0.2
GOPC-202ENST00000368498 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 API5Q9BZZ5 524 aaKnown RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
GOPC-202ENST00000368498 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 MINK1Q8N4C8 1332 aaPredicted RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
GOPC-202ENST00000368498 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
GOPC-202ENST00000368498 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
GOPC-202ENST00000368498 CLSTN1O94985 981 aa16.29■□□□□ 0.2
GOPC-202ENST00000368498 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
GOPC-202ENST00000368498 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
GOPC-202ENST00000368498 GPS2Q13227 327 aa16.28■□□□□ 0.2
GOPC-202ENST00000368498 MBD3O95983 291 aa16.28■□□□□ 0.2
GOPC-202ENST00000368498 AMPHP49418 695 aa16.27■□□□□ 0.2
GOPC-202ENST00000368498 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
GOPC-202ENST00000368498 FMNL2Q96PY5 1086 aa16.27■□□□□ 0.2
GOPC-202ENST00000368498 CCDC34Q96HJ3 373 aa16.27■□□□□ 0.2
GOPC-202ENST00000368498 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.19
GOPC-202ENST00000368498 SKIDA1Q1XH10 827 aa16.27■□□□□ 0.19
GOPC-202ENST00000368498 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
GOPC-202ENST00000368498 PATL2C9JE40 543 aaKnown RBP16.26■□□□□ 0.19
GOPC-202ENST00000368498 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
GOPC-202ENST00000368498 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
GOPC-202ENST00000368498 CBX1P83916 185 aa16.26■□□□□ 0.19
GOPC-202ENST00000368498 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
GOPC-202ENST00000368498 K7ELQ4 463 aaPredicted RBP16.25■□□□□ 0.19
GOPC-202ENST00000368498 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
GOPC-202ENST00000368498 TBC1D2Q9BYX2 928 aa16.25■□□□□ 0.19
GOPC-202ENST00000368498 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
GOPC-202ENST00000368498 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
GOPC-202ENST00000368498 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
GOPC-202ENST00000368498 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
GOPC-202ENST00000368498 SYCE3A1L190 88 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms