RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
VTA1-201ENST00000367621 KANK1Q14678 1352 aa13.74□□□□□ -0.21
VTA1-201ENST00000367621 REREQ9P2R6 1566 aa13.74□□□□□ -0.21
VTA1-201ENST00000367621 PTPRTO14522 1441 aa13.73□□□□□ -0.21
VTA1-201ENST00000367621 GGT6Q6P531 493 aa13.73□□□□□ -0.21
VTA1-201ENST00000367621 TONSLQ96HA7 1378 aa13.72□□□□□ -0.21
VTA1-201ENST00000367621 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
VTA1-201ENST00000367621 AGLP35573 1532 aa13.72□□□□□ -0.21
VTA1-201ENST00000367621 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
VTA1-201ENST00000367621 FKBP8Q14318 412 aa13.71□□□□□ -0.21
VTA1-201ENST00000367621 PROM2Q8N271 834 aa13.71□□□□□ -0.21
VTA1-201ENST00000367621 ABCC3O15438 1527 aa13.7□□□□□ -0.22
VTA1-201ENST00000367621 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
VTA1-201ENST00000367621 SIGLEC1Q9BZZ2 1709 aa13.68□□□□□ -0.22
VTA1-201ENST00000367621 TET3O43151 1660 aa13.68□□□□□ -0.22
VTA1-201ENST00000367621 EFCAB6Q5THR3 1501 aa13.68□□□□□ -0.22
VTA1-201ENST00000367621 WASHC2CQ9Y4E1 1318 aa13.67□□□□□ -0.22
VTA1-201ENST00000367621 NPATQ14207 1427 aa13.67□□□□□ -0.22
VTA1-201ENST00000367621 E9PCH4 1651 aa13.67□□□□□ -0.22
VTA1-201ENST00000367621 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
VTA1-201ENST00000367621 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
VTA1-201ENST00000367621 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
VTA1-201ENST00000367621 TRPM2O94759 1503 aa13.64□□□□□ -0.23
VTA1-201ENST00000367621 NBPF8Q3BBV2 869 aa13.64□□□□□ -0.23
VTA1-201ENST00000367621 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
VTA1-201ENST00000367621 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
VTA1-201ENST00000367621 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
VTA1-201ENST00000367621 NOS1P29475 1434 aa13.62□□□□□ -0.23
VTA1-201ENST00000367621 CEP152O94986 1710 aa13.6□□□□□ -0.23
VTA1-201ENST00000367621 MLECQ14165 292 aa13.6□□□□□ -0.23
VTA1-201ENST00000367621 UHRF1BP1Q6BDS2 1440 aa13.59□□□□□ -0.23
VTA1-201ENST00000367621 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
VTA1-201ENST00000367621 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
VTA1-201ENST00000367621 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
VTA1-201ENST00000367621 CLTCL1P53675 1640 aa13.58□□□□□ -0.24
VTA1-201ENST00000367621 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
VTA1-201ENST00000367621 UGGT1Q9NYU2 1555 aa13.58□□□□□ -0.24
VTA1-201ENST00000367621 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
VTA1-201ENST00000367621 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
VTA1-201ENST00000367621 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
VTA1-201ENST00000367621 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
VTA1-201ENST00000367621 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
VTA1-201ENST00000367621 DCAF11Q8TEB1 546 aa13.56□□□□□ -0.24
VTA1-201ENST00000367621 ARID4BQ4LE39 1312 aaPredicted RBP13.56□□□□□ -0.24
VTA1-201ENST00000367621 C7P10643 843 aa13.55□□□□□ -0.24
VTA1-201ENST00000367621 SLC39A7Q92504 469 aa13.55□□□□□ -0.24
VTA1-201ENST00000367621 SYNMO15061 1565 aa13.54□□□□□ -0.24
VTA1-201ENST00000367621 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
VTA1-201ENST00000367621 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
VTA1-201ENST00000367621 ERVK-7P63135 1459 aa13.54□□□□□ -0.24
VTA1-201ENST00000367621 IDI1Q13907 227 aa13.53□□□□□ -0.24
VTA1-201ENST00000367621 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
VTA1-201ENST00000367621 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
VTA1-201ENST00000367621 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
VTA1-201ENST00000367621 SLC52A1Q9NWF4 448 aa13.52□□□□□ -0.25
VTA1-201ENST00000367621 METRNQ9UJH8 293 aa13.52□□□□□ -0.25
VTA1-201ENST00000367621 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
VTA1-201ENST00000367621 ADGRB3O60242 1522 aa13.5□□□□□ -0.25
VTA1-201ENST00000367621 CLTCQ00610 1675 aaKnown RBP13.5□□□□□ -0.25
VTA1-201ENST00000367621 RALGAPBQ86X10 1494 aa13.49□□□□□ -0.25
VTA1-201ENST00000367621 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
VTA1-201ENST00000367621 ZNF326Q5BKZ1 582 aaKnown RBP13.49□□□□□ -0.25
VTA1-201ENST00000367621 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
VTA1-201ENST00000367621 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
VTA1-201ENST00000367621 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
VTA1-201ENST00000367621 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
VTA1-201ENST00000367621 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
VTA1-201ENST00000367621 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
VTA1-201ENST00000367621 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
VTA1-201ENST00000367621 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
VTA1-201ENST00000367621 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
VTA1-201ENST00000367621 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.25
VTA1-201ENST00000367621 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
VTA1-201ENST00000367621 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
VTA1-201ENST00000367621 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
VTA1-201ENST00000367621 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.25
VTA1-201ENST00000367621 ADGRF5Q8IZF2 1346 aa13.45□□□□□ -0.26
VTA1-201ENST00000367621 MYOM2P54296 1465 aa13.45□□□□□ -0.26
VTA1-201ENST00000367621 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
VTA1-201ENST00000367621 MROH2AA6NES4 1674 aa13.44□□□□□ -0.26
VTA1-201ENST00000367621 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
VTA1-201ENST00000367621 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
VTA1-201ENST00000367621 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
VTA1-201ENST00000367621 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
VTA1-201ENST00000367621 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
VTA1-201ENST00000367621 TNRQ92752 1358 aa13.43□□□□□ -0.26
VTA1-201ENST00000367621 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
VTA1-201ENST00000367621 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
VTA1-201ENST00000367621 POTEMA6NI47 508 aa13.41□□□□□ -0.26
VTA1-201ENST00000367621 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
VTA1-201ENST00000367621 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
VTA1-201ENST00000367621 A2ML1A8K2U0 1454 aa13.41□□□□□ -0.26
VTA1-201ENST00000367621 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
VTA1-201ENST00000367621 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
VTA1-201ENST00000367621 TRPM1Q7Z4N2 1603 aa13.4□□□□□ -0.26
VTA1-201ENST00000367621 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
VTA1-201ENST00000367621 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
VTA1-201ENST00000367621 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
VTA1-201ENST00000367621 USP47Q96K76 1375 aa13.4□□□□□ -0.26
VTA1-201ENST00000367621 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms