RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 RPGRIP1LQ68CZ1 1315 aa6.78□□□□□ -1.32
CDC42BPA-204ENST00000366767 PPP2R1AP30153 589 aa6.78□□□□□ -1.32
CDC42BPA-204ENST00000366767 A0A0U1RQG5 324 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-204ENST00000366767 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-204ENST00000366767 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.335e-7■■■■□ 23.8
CDC42BPA-204ENST00000366767 RUNDC1Q96C34 613 aa6.77□□□□□ -1.33
CDC42BPA-204ENST00000366767 INSRP06213 1382 aa6.77□□□□□ -1.33
CDC42BPA-204ENST00000366767 NBPF1Q3BBV0 1214 aa6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 DUOX2Q9NRD8 1548 aa6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 LMOD3Q0VAK6 560 aa6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 PHF23Q9BUL5 403 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 PZPP20742 1482 aa6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 GOLGA6L6A8MZA4 724 aa6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 TRAK1Q9UPV9 953 aa6.76□□□□□ -1.33
CDC42BPA-204ENST00000366767 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 PLCB2Q00722 1185 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 APAF1O14727 1248 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 CCDC146Q8IYE0 955 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 MAGI3Q5TCQ9 1506 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 ADAMTS8Q9UP79 889 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 TEX14Q8IWB6 1497 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 HSCBQ8IWL3 235 aa6.75□□□□□ -1.33
CDC42BPA-204ENST00000366767 EIF2AK4Q9P2K8 1649 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 PLCH2O75038 1416 aa6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 ZKSCAN2Q63HK3 967 aa6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 CT47B1P0C2W7 299 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 AFAP1Q8N556 730 aa6.74□□□□□ -1.33
CDC42BPA-204ENST00000366767 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 OSCARQ8IYS5 282 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 SMC4Q9NTJ3 1288 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 DNAJC5BQ9UF47 199 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 HSP90AB1P08238 724 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 ZRSR1Q15695 479 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 WDR63Q8IWG1 891 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 RTEL1-TNFRSF6BF6WH68 1400 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 PRAG1Q86YV5 1406 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 ANO8Q9HCE9 1232 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 GOLGA6L3A6NEY3 463 aa6.73□□□□□ -1.33
CDC42BPA-204ENST00000366767 PLIN1O60240 522 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 TPRNQ4KMQ1 711 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 ADGBQ8N7X0 1667 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 ARHGEF5Q12774 1597 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 DDX19BQ9UMR2 479 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 BACH2Q9BYV9 841 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 FAM135AQ9P2D6 1515 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 STK26Q9P289 416 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 DHX29Q7Z478 1369 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 SPATA31E1Q6ZUB1 1445 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 PARD3Q8TEW0 1356 aa6.72□□□□□ -1.33
CDC42BPA-204ENST00000366767 CFAP70Q5T0N1 1121 aa6.71□□□□□ -1.33
CDC42BPA-204ENST00000366767 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.71□□□□□ -1.33
CDC42BPA-204ENST00000366767 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.33
CDC42BPA-204ENST00000366767 ZBTB7CA1YPR0 619 aa6.71□□□□□ -1.33
CDC42BPA-204ENST00000366767 SLC52A1Q9NWF4 448 aa6.71□□□□□ -1.34
CDC42BPA-204ENST00000366767 SLFN5Q08AF3 891 aa6.71□□□□□ -1.34
CDC42BPA-204ENST00000366767 ITPRIPQ8IWB1 547 aa6.71□□□□□ -1.34
CDC42BPA-204ENST00000366767 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.34
CDC42BPA-204ENST00000366767 PUS7Q96PZ0 661 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 DIAPH1O60610 1272 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 NRDCO43847 1150 aa6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 KIF16BQ96L93 1317 aa6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 CALRP27797 417 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 GBP4Q96PP9 640 aa6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 LRPPRCP42704 1394 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 GPRASP1Q5JY77 1395 aa6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 KIAA2012Q0VF49 1180 aa6.7□□□□□ -1.34
CDC42BPA-204ENST00000366767 RNF123Q5XPI4 1314 aa6.69□□□□□ -1.34
CDC42BPA-204ENST00000366767 RTF1Q92541 710 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-204ENST00000366767 GSE1Q14687 1217 aa6.69□□□□□ -1.34
CDC42BPA-204ENST00000366767 DZIP1LQ8IYY4 767 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-204ENST00000366767 MCCP23508 829 aa6.69□□□□□ -1.34
CDC42BPA-204ENST00000366767 SAFB2Q14151 953 aaKnown RBP eCLIP6.68□□□□□ -1.345e-6■■■□□ 16.3
CDC42BPA-204ENST00000366767 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 NSD2O96028 1365 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 NPC1L1Q9UHC9 1359 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 ZNF428Q96B54 188 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 GZF1Q9H116 711 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 KDM5DQ9BY66 1539 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 ABCA8O94911 1581 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 DRC7Q8IY82 874 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 SYCP2Q9BX26 1530 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 ABCC10Q5T3U5 1492 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 CEP170Q5SW79 1584 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 ZNF771Q7L3S4 317 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 ATAD2Q6PL18 1390 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 APPP05067 770 aa6.68□□□□□ -1.34
CDC42BPA-204ENST00000366767 COL17A1Q9UMD9 1497 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 ADGRL1O94910 1474 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 API5Q9BZZ5 524 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 SPRYD3Q8NCJ5 442 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 HMMRO75330 724 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 MTHFSP49914 203 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 TCP11L2Q8N4U5 519 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 NKTRP30414 1462 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 PIK3C2GO75747 1445 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 HDAC5Q9UQL6 1122 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 ASXL1Q8IXJ9 1541 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms