RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 PTPRGP23470 1445 aa17.97■□□□□ 0.47
SCUBE1-202ENST00000360835 RUFY2Q8WXA3 655 aa17.97■□□□□ 0.47
SCUBE1-202ENST00000360835 IGF1RP08069 1367 aa17.96■□□□□ 0.47
SCUBE1-202ENST00000360835 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
SCUBE1-202ENST00000360835 FAM184AQ8NB25 1140 aa17.96■□□□□ 0.46
SCUBE1-202ENST00000360835 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
SCUBE1-202ENST00000360835 EFCAB5A4FU69 1503 aa17.95■□□□□ 0.46
SCUBE1-202ENST00000360835 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
SCUBE1-202ENST00000360835 BECN2A8MW95 431 aa17.94■□□□□ 0.46
SCUBE1-202ENST00000360835 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
SCUBE1-202ENST00000360835 EHBP1L1Q8N3D4 1523 aa17.94■□□□□ 0.46
SCUBE1-202ENST00000360835 ELL2O00472 640 aaPredicted RBP17.94■□□□□ 0.46
SCUBE1-202ENST00000360835 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
SCUBE1-202ENST00000360835 LTV1Q96GA3 475 aaPredicted RBP17.93■□□□□ 0.46
SCUBE1-202ENST00000360835 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
SCUBE1-202ENST00000360835 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
SCUBE1-202ENST00000360835 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
SCUBE1-202ENST00000360835 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.93■□□□□ 0.46
SCUBE1-202ENST00000360835 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
SCUBE1-202ENST00000360835 NUCB2P80303 420 aa17.92■□□□□ 0.46
SCUBE1-202ENST00000360835 RIPK4P57078 832 aa17.92■□□□□ 0.46
SCUBE1-202ENST00000360835 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
SCUBE1-202ENST00000360835 C22orf23Q9BZE7 217 aa17.91■□□□□ 0.46
SCUBE1-202ENST00000360835 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
SCUBE1-202ENST00000360835 CREBRFQ8IUR6 639 aa17.9■□□□□ 0.46
SCUBE1-202ENST00000360835 TOMM22Q9NS69 142 aa17.9■□□□□ 0.46
SCUBE1-202ENST00000360835 C1orf141Q5JVX7 400 aa17.9■□□□□ 0.46
SCUBE1-202ENST00000360835 A0A0U1RQG5 324 aaPredicted RBP17.89■□□□□ 0.46
SCUBE1-202ENST00000360835 FOXD4L6Q3SYB3 417 aaPredicted RBP17.89■□□□□ 0.45
SCUBE1-202ENST00000360835 FOXD4L3Q6VB84 417 aaPredicted RBP17.89■□□□□ 0.45
SCUBE1-202ENST00000360835 TPM1P09493 284 aa17.89■□□□□ 0.45
SCUBE1-202ENST00000360835 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.45
SCUBE1-202ENST00000360835 HECW1Q76N89 1606 aa17.89■□□□□ 0.45
SCUBE1-202ENST00000360835 TSR1Q2NL82 804 aaKnown RBP17.89■□□□□ 0.45
SCUBE1-202ENST00000360835 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 NFKBIBQ15653 356 aa17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 NEXNQ0ZGT2 675 aa17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
SCUBE1-202ENST00000360835 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
SCUBE1-202ENST00000360835 C9orf78Q9NZ63 289 aaPredicted RBP17.87■□□□□ 0.45
SCUBE1-202ENST00000360835 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
SCUBE1-202ENST00000360835 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
SCUBE1-202ENST00000360835 GNAI1P63096 354 aa17.87■□□□□ 0.45
SCUBE1-202ENST00000360835 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
SCUBE1-202ENST00000360835 GPS2Q13227 327 aa17.86■□□□□ 0.45
SCUBE1-202ENST00000360835 TEFQ10587 303 aa17.85■□□□□ 0.45
SCUBE1-202ENST00000360835 FAM43AQ8N2R8 423 aa17.85■□□□□ 0.45
SCUBE1-202ENST00000360835 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
SCUBE1-202ENST00000360835 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
SCUBE1-202ENST00000360835 NUTM2FA1L443 756 aa17.84■□□□□ 0.45
SCUBE1-202ENST00000360835 AKAP17AQ02040 695 aaKnown RBP17.84■□□□□ 0.45
SCUBE1-202ENST00000360835 PANK1Q8TE04 598 aa17.84■□□□□ 0.45
SCUBE1-202ENST00000360835 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
SCUBE1-202ENST00000360835 CCDC70Q6NSX1 233 aa17.84■□□□□ 0.45
SCUBE1-202ENST00000360835 TPM2P07951 284 aa17.83■□□□□ 0.45
SCUBE1-202ENST00000360835 CDC45O75419 566 aa17.83■□□□□ 0.45
SCUBE1-202ENST00000360835 CPLX2Q6PUV4 134 aaKnown RBP17.83■□□□□ 0.44
SCUBE1-202ENST00000360835 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.44
SCUBE1-202ENST00000360835 PES1O00541 588 aaKnown RBP17.83■□□□□ 0.44
SCUBE1-202ENST00000360835 MRE11P49959 708 aa17.83■□□□□ 0.44
SCUBE1-202ENST00000360835 SYNE3Q6ZMZ3 975 aa17.82■□□□□ 0.44
SCUBE1-202ENST00000360835 HOOK1Q9UJC3 728 aaKnown RBP17.82■□□□□ 0.44
SCUBE1-202ENST00000360835 CFTRP13569 1480 aa17.81■□□□□ 0.44
SCUBE1-202ENST00000360835 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
SCUBE1-202ENST00000360835 LNPKQ9C0E8 428 aa17.81■□□□□ 0.44
SCUBE1-202ENST00000360835 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
SCUBE1-202ENST00000360835 VSIG10Q8N0Z9 540 aa17.81■□□□□ 0.44
SCUBE1-202ENST00000360835 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 ZNF592Q92610 1267 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 HSP90AB4PQ58FF6 505 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 ERC2O15083 957 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 TRIM29Q14134 588 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 SMC3Q9UQE7 1217 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 NASPP49321 788 aaPredicted RBP17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 TTC5Q8N0Z6 440 aa17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
SCUBE1-202ENST00000360835 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
SCUBE1-202ENST00000360835 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
SCUBE1-202ENST00000360835 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
SCUBE1-202ENST00000360835 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
SCUBE1-202ENST00000360835 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
SCUBE1-202ENST00000360835 CPLX1O14810 134 aa17.79■□□□□ 0.44
SCUBE1-202ENST00000360835 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 CCDC39Q9UFE4 941 aa17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 ZNF771Q7L3S4 317 aaPredicted RBP17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 CEP89Q96ST8 783 aa17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 ANKRD20A12PQ8NF67 263 aa17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 MARCH6O60337 910 aa17.78■□□□□ 0.44
SCUBE1-202ENST00000360835 EIF2S2P20042 333 aaKnown RBP17.77■□□□□ 0.44
SCUBE1-202ENST00000360835 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
SCUBE1-202ENST00000360835 VPS37CA5D8V6 355 aaPredicted RBP17.77■□□□□ 0.44
SCUBE1-202ENST00000360835 TEX35Q5T0J7 233 aa17.77■□□□□ 0.43
SCUBE1-202ENST00000360835 SASS6Q6UVJ0 657 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms