RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 MYO5BQ9ULV0 1848 aa27.99■■■□□ 2.07
HLA-DRB1-201ENST00000360004 NPHP4O75161 1426 aaPredicted RBP27.99■■■□□ 2.07
HLA-DRB1-201ENST00000360004 LTKP29376 864 aa27.98■■■□□ 2.07
HLA-DRB1-201ENST00000360004 NUTM2DQ5VT03 806 aaPredicted RBP27.97■■■□□ 2.07
HLA-DRB1-201ENST00000360004 ANKRD30BQ9BXX2 1392 aa27.97■■■□□ 2.07
HLA-DRB1-201ENST00000360004 RGL3Q3MIN7 710 aa27.96■■■□□ 2.07
HLA-DRB1-201ENST00000360004 SENP3Q9H4L4 574 aaPredicted RBP27.96■■■□□ 2.07
HLA-DRB1-201ENST00000360004 NEURL4Q96JN8 1562 aa27.93■■■□□ 2.06
HLA-DRB1-201ENST00000360004 ZFYVE9O95405 1425 aa27.92■■■□□ 2.06
HLA-DRB1-201ENST00000360004 MED14O60244 1454 aa27.91■■■□□ 2.06
HLA-DRB1-201ENST00000360004 IQGAP1P46940 1657 aa27.91■■■□□ 2.06
HLA-DRB1-201ENST00000360004 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
HLA-DRB1-201ENST00000360004 RPGRIP1LQ68CZ1 1315 aa27.9■■■□□ 2.06
HLA-DRB1-201ENST00000360004 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
HLA-DRB1-201ENST00000360004 VGFO15240 615 aaPredicted RBP27.85■■■□□ 2.05
HLA-DRB1-201ENST00000360004 SPATA31E1Q6ZUB1 1445 aa27.84■■■□□ 2.05
HLA-DRB1-201ENST00000360004 SLC26A8Q96RN1 970 aa27.83■■■□□ 2.05
HLA-DRB1-201ENST00000360004 NEXMIFQ5QGS0 1516 aa27.82■■■□□ 2.04
HLA-DRB1-201ENST00000360004 NEUROD1Q13562 356 aa27.8■■■□□ 2.04
HLA-DRB1-201ENST00000360004 ZNF335Q9H4Z2 1342 aaPredicted RBP27.79■■■□□ 2.04
HLA-DRB1-201ENST00000360004 SIN3AQ96ST3 1273 aa27.75■■■□□ 2.03
HLA-DRB1-201ENST00000360004 PPLO60437 1756 aa27.75■■■□□ 2.03
HLA-DRB1-201ENST00000360004 DCAF11Q8TEB1 546 aa27.73■■■□□ 2.03
HLA-DRB1-201ENST00000360004 KDM2AQ9Y2K7 1162 aa27.73■■■□□ 2.03
HLA-DRB1-201ENST00000360004 TBX22Q9Y458 520 aa27.72■■■□□ 2.03
HLA-DRB1-201ENST00000360004 DIP2AQ14689 1571 aa27.7■■■□□ 2.03
HLA-DRB1-201ENST00000360004 ADGRF5Q8IZF2 1346 aa27.69■■■□□ 2.02
HLA-DRB1-201ENST00000360004 CCER1Q8TC90 406 aaPredicted RBP27.69■■■□□ 2.02
HLA-DRB1-201ENST00000360004 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
HLA-DRB1-201ENST00000360004 ADAMTS13Q76LX8 1427 aa27.67■■■□□ 2.02
HLA-DRB1-201ENST00000360004 IFT172Q9UG01 1749 aa27.67■■■□□ 2.02
HLA-DRB1-201ENST00000360004 MYOM2P54296 1465 aa27.64■■■□□ 2.02
HLA-DRB1-201ENST00000360004 KCNA6P17658 529 aa27.64■■■□□ 2.02
HLA-DRB1-201ENST00000360004 STAC3Q96MF2 364 aa27.64■■■□□ 2.02
HLA-DRB1-201ENST00000360004 CPS1P31327 1500 aa27.63■■■□□ 2.01
HLA-DRB1-201ENST00000360004 CERKQ8TCT0 537 aa27.63■■■□□ 2.01
HLA-DRB1-201ENST00000360004 TONSLQ96HA7 1378 aa27.61■■■□□ 2.01
HLA-DRB1-201ENST00000360004 PIK3R4Q99570 1358 aa27.61■■■□□ 2.01
HLA-DRB1-201ENST00000360004 LTBP4Q8N2S1 1624 aa27.61■■■□□ 2.01
HLA-DRB1-201ENST00000360004 NRXN3Q9Y4C0 1643 aa27.61■■■□□ 2.01
HLA-DRB1-201ENST00000360004 ALKQ9UM73 1620 aa27.59■■■□□ 2.01
HLA-DRB1-201ENST00000360004 PIK3C2GO75747 1445 aa27.58■■■□□ 2.01
HLA-DRB1-201ENST00000360004 PROSER2Q86WR7 435 aaPredicted RBP27.58■■■□□ 2.01
HLA-DRB1-201ENST00000360004 L3MBTL2Q969R5 705 aa27.57■■■□□ 2
HLA-DRB1-201ENST00000360004 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
HLA-DRB1-201ENST00000360004 METP08581 1390 aa27.57■■■□□ 2
HLA-DRB1-201ENST00000360004 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
HLA-DRB1-201ENST00000360004 NWD1Q149M9 1564 aa27.53■■■□□ 2
HLA-DRB1-201ENST00000360004 NKTRP30414 1462 aaKnown RBP27.53■■■□□ 2
HLA-DRB1-201ENST00000360004 NRXN1Q9ULB1 1477 aa27.53■■■□□ 2
HLA-DRB1-201ENST00000360004 CFAP70Q5T0N1 1121 aa27.53■■■□□ 2
HLA-DRB1-201ENST00000360004 C14orf37Q86TY3 774 aa27.53■■■□□ 2
HLA-DRB1-201ENST00000360004 CHD2O14647 1828 aaKnown RBP27.52■■■□□ 2
HLA-DRB1-201ENST00000360004 STRCP1A6NGW2 1772 aa27.52■■■□□ 2
HLA-DRB1-201ENST00000360004 C14orf93Q9H972 538 aaKnown RBP27.51■■□□□ 1.99
HLA-DRB1-201ENST00000360004 LAMC1P11047 1609 aa27.5■■□□□ 1.99
HLA-DRB1-201ENST00000360004 TMEM132EQ6IEE7 984 aa27.5■■□□□ 1.99
HLA-DRB1-201ENST00000360004 STK26Q9P289 416 aa27.5■■□□□ 1.99
HLA-DRB1-201ENST00000360004 LRRC7Q96NW7 1537 aa27.5■■□□□ 1.99
HLA-DRB1-201ENST00000360004 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
HLA-DRB1-201ENST00000360004 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
HLA-DRB1-201ENST00000360004 RBM33Q96EV2 1170 aaKnown RBP27.47■■□□□ 1.99
HLA-DRB1-201ENST00000360004 IQSEC2Q5JU85 1478 aa27.46■■□□□ 1.99
HLA-DRB1-201ENST00000360004 SETD1AO15047 1707 aaKnown RBP27.46■■□□□ 1.99
HLA-DRB1-201ENST00000360004 PRAG1Q86YV5 1406 aa27.44■■□□□ 1.98
HLA-DRB1-201ENST00000360004 XRN1Q8IZH2 1706 aaKnown RBP27.43■■□□□ 1.98
HLA-DRB1-201ENST00000360004 LRPPRCP42704 1394 aaKnown RBP27.42■■□□□ 1.98
HLA-DRB1-201ENST00000360004 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
HLA-DRB1-201ENST00000360004 YTHDC2Q9H6S0 1430 aaKnown RBP27.41■■□□□ 1.98
HLA-DRB1-201ENST00000360004 MSH6P52701 1360 aa27.39■■□□□ 1.98
HLA-DRB1-201ENST00000360004 ASXL1Q8IXJ9 1541 aa27.39■■□□□ 1.98
HLA-DRB1-201ENST00000360004 TOM1O60784 492 aa27.38■■□□□ 1.97
HLA-DRB1-201ENST00000360004 PTCH1Q13635 1447 aa27.38■■□□□ 1.97
HLA-DRB1-201ENST00000360004 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
HLA-DRB1-201ENST00000360004 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
HLA-DRB1-201ENST00000360004 ROBO2Q9HCK4 1378 aa27.35■■□□□ 1.97
HLA-DRB1-201ENST00000360004 TIMELESSQ9UNS1 1208 aa27.35■■□□□ 1.97
HLA-DRB1-201ENST00000360004 TRAK1Q9UPV9 953 aa27.35■■□□□ 1.97
HLA-DRB1-201ENST00000360004 NCOA3Q9Y6Q9 1424 aa27.34■■□□□ 1.97
HLA-DRB1-201ENST00000360004 POGKQ9P215 609 aa27.34■■□□□ 1.97
HLA-DRB1-201ENST00000360004 FBXO41Q8TF61 875 aa27.33■■□□□ 1.97
HLA-DRB1-201ENST00000360004 KIAA1210Q9ULL0 1709 aa27.33■■□□□ 1.96
HLA-DRB1-201ENST00000360004 ATF3P18847 181 aa27.32■■□□□ 1.96
HLA-DRB1-201ENST00000360004 ROCK2O75116 1388 aaKnown RBP27.32■■□□□ 1.96
HLA-DRB1-201ENST00000360004 ADGRB1O14514 1584 aa27.31■■□□□ 1.96
HLA-DRB1-201ENST00000360004 NBPF1Q3BBV0 1214 aa27.31■■□□□ 1.96
HLA-DRB1-201ENST00000360004 C19orf44Q9H6X5 657 aa27.31■■□□□ 1.96
HLA-DRB1-201ENST00000360004 TECPR2O15040 1411 aa27.31■■□□□ 1.96
HLA-DRB1-201ENST00000360004 PIP4K2BP78356 416 aa27.3■■□□□ 1.96
HLA-DRB1-201ENST00000360004 WAPLQ7Z5K2 1190 aa27.3■■□□□ 1.96
HLA-DRB1-201ENST00000360004 KNDC1Q76NI1 1749 aa27.3■■□□□ 1.96
HLA-DRB1-201ENST00000360004 XIRP1Q702N8 1843 aaKnown RBP27.3■■□□□ 1.96
HLA-DRB1-201ENST00000360004 SAFB2Q14151 953 aaKnown RBP eCLIP27.29■■□□□ 1.96
HLA-DRB1-201ENST00000360004 NBPF8Q3BBV2 869 aa27.29■■□□□ 1.96
HLA-DRB1-201ENST00000360004 PRAM1Q96QH2 718 aa27.28■■□□□ 1.96
HLA-DRB1-201ENST00000360004 FAM135BQ49AJ0 1406 aa27.26■■□□□ 1.95
HLA-DRB1-201ENST00000360004 ADGRL3Q9HAR2 1447 aa27.26■■□□□ 1.95
HLA-DRB1-201ENST00000360004 CADPS2Q86UW7 1296 aa27.26■■□□□ 1.95
HLA-DRB1-201ENST00000360004 SIRT1Q96EB6 747 aa27.26■■□□□ 1.95
HLA-DRB1-201ENST00000360004 TRPM1Q7Z4N2 1603 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms