RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
NIF3L1-201ENST00000359683 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
NIF3L1-201ENST00000359683 UBR1Q8IWV7 1749 aa17.95■□□□□ 0.46
NIF3L1-201ENST00000359683 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
NIF3L1-201ENST00000359683 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
NIF3L1-201ENST00000359683 THEMISQ8N1K5 641 aaPredicted RBP17.94■□□□□ 0.46
NIF3L1-201ENST00000359683 RPGRIP1LQ68CZ1 1315 aa17.93■□□□□ 0.46
NIF3L1-201ENST00000359683 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
NIF3L1-201ENST00000359683 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
NIF3L1-201ENST00000359683 ZNF326Q5BKZ1 582 aaKnown RBP17.92■□□□□ 0.46
NIF3L1-201ENST00000359683 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
NIF3L1-201ENST00000359683 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
NIF3L1-201ENST00000359683 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
NIF3L1-201ENST00000359683 STAC3Q96MF2 364 aa17.9■□□□□ 0.46
NIF3L1-201ENST00000359683 ZNF335Q9H4Z2 1342 aaPredicted RBP17.89■□□□□ 0.46
NIF3L1-201ENST00000359683 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
NIF3L1-201ENST00000359683 SLIT1O75093 1534 aa17.88■□□□□ 0.45
NIF3L1-201ENST00000359683 HDGFP51858 240 aaKnown RBP17.88■□□□□ 0.45
NIF3L1-201ENST00000359683 DCAF11Q8TEB1 546 aa17.88■□□□□ 0.45
NIF3L1-201ENST00000359683 ZFYVE9O95405 1425 aa17.88■□□□□ 0.45
NIF3L1-201ENST00000359683 RIMS2Q9UQ26 1411 aa17.87■□□□□ 0.45
NIF3L1-201ENST00000359683 NEXMIFQ5QGS0 1516 aa17.87■□□□□ 0.45
NIF3L1-201ENST00000359683 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.87■□□□□ 0.45
NIF3L1-201ENST00000359683 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
NIF3L1-201ENST00000359683 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
NIF3L1-201ENST00000359683 LTKP29376 864 aa17.85■□□□□ 0.45
NIF3L1-201ENST00000359683 TXNDC2Q86VQ3 553 aa17.85■□□□□ 0.45
NIF3L1-201ENST00000359683 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
NIF3L1-201ENST00000359683 PPLO60437 1756 aa17.85■□□□□ 0.45
NIF3L1-201ENST00000359683 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
NIF3L1-201ENST00000359683 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.45
NIF3L1-201ENST00000359683 ANKLE2Q86XL3 938 aa17.83■□□□□ 0.45
NIF3L1-201ENST00000359683 EID1Q9Y6B2 187 aa17.83■□□□□ 0.45
NIF3L1-201ENST00000359683 ADGRF5Q8IZF2 1346 aa17.83■□□□□ 0.44
NIF3L1-201ENST00000359683 MYOM2P54296 1465 aa17.82■□□□□ 0.44
NIF3L1-201ENST00000359683 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
NIF3L1-201ENST00000359683 NRXN1Q9ULB1 1477 aa17.8■□□□□ 0.44
NIF3L1-201ENST00000359683 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
NIF3L1-201ENST00000359683 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
NIF3L1-201ENST00000359683 IQGAP1P46940 1657 aa17.79■□□□□ 0.44
NIF3L1-201ENST00000359683 NBPF8Q3BBV2 869 aa17.78■□□□□ 0.44
NIF3L1-201ENST00000359683 PRAG1Q86YV5 1406 aa17.78■□□□□ 0.44
NIF3L1-201ENST00000359683 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.44
NIF3L1-201ENST00000359683 CPS1P31327 1500 aa17.77■□□□□ 0.44
NIF3L1-201ENST00000359683 PIK3C2GO75747 1445 aa17.76■□□□□ 0.43
NIF3L1-201ENST00000359683 MED14O60244 1454 aa17.76■□□□□ 0.43
NIF3L1-201ENST00000359683 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
NIF3L1-201ENST00000359683 C14orf93Q9H972 538 aaKnown RBP17.75■□□□□ 0.43
NIF3L1-201ENST00000359683 NPHP4O75161 1426 aaPredicted RBP17.75■□□□□ 0.43
NIF3L1-201ENST00000359683 SETBP1Q9Y6X0 1596 aa17.73■□□□□ 0.43
NIF3L1-201ENST00000359683 CFAP70Q5T0N1 1121 aa17.72■□□□□ 0.43
NIF3L1-201ENST00000359683 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
NIF3L1-201ENST00000359683 BCANQ96GW7 911 aa17.71■□□□□ 0.43
NIF3L1-201ENST00000359683 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
NIF3L1-201ENST00000359683 STRCP1A6NGW2 1772 aa17.71■□□□□ 0.43
NIF3L1-201ENST00000359683 NRXN3Q9Y4C0 1643 aa17.71■□□□□ 0.42
NIF3L1-201ENST00000359683 ALKQ9UM73 1620 aa17.7■□□□□ 0.42
NIF3L1-201ENST00000359683 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
NIF3L1-201ENST00000359683 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
NIF3L1-201ENST00000359683 SLC26A8Q96RN1 970 aa17.69■□□□□ 0.42
NIF3L1-201ENST00000359683 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
NIF3L1-201ENST00000359683 ILDR2Q71H61 639 aa17.67■□□□□ 0.42
NIF3L1-201ENST00000359683 LAMC1P11047 1609 aa17.66■□□□□ 0.42
NIF3L1-201ENST00000359683 RALGAPBQ86X10 1494 aa17.66■□□□□ 0.42
NIF3L1-201ENST00000359683 SETD1AO15047 1707 aaKnown RBP17.65■□□□□ 0.42
NIF3L1-201ENST00000359683 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
NIF3L1-201ENST00000359683 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
NIF3L1-201ENST00000359683 GPRASP1Q5JY77 1395 aa17.65■□□□□ 0.42
NIF3L1-201ENST00000359683 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
NIF3L1-201ENST00000359683 METP08581 1390 aa17.64■□□□□ 0.41
NIF3L1-201ENST00000359683 ADGRB1O14514 1584 aa17.64■□□□□ 0.41
NIF3L1-201ENST00000359683 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
NIF3L1-201ENST00000359683 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
NIF3L1-201ENST00000359683 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
NIF3L1-201ENST00000359683 PIP4K2BP78356 416 aa17.61■□□□□ 0.41
NIF3L1-201ENST00000359683 TOM1O60784 492 aa17.61■□□□□ 0.41
NIF3L1-201ENST00000359683 LRRC7Q96NW7 1537 aa17.61■□□□□ 0.41
NIF3L1-201ENST00000359683 CARD11Q9BXL7 1154 aa17.61■□□□□ 0.41
NIF3L1-201ENST00000359683 PTPRUQ92729 1446 aa17.59■□□□□ 0.41
NIF3L1-201ENST00000359683 LRPPRCP42704 1394 aaKnown RBP17.59■□□□□ 0.41
NIF3L1-201ENST00000359683 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
NIF3L1-201ENST00000359683 ABCC11Q96J66 1382 aa17.58■□□□□ 0.41
NIF3L1-201ENST00000359683 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.41
NIF3L1-201ENST00000359683 KCNA6P17658 529 aa17.58■□□□□ 0.4
NIF3L1-201ENST00000359683 HSPA1LP34931 641 aa17.58■□□□□ 0.4
NIF3L1-201ENST00000359683 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.4
NIF3L1-201ENST00000359683 MED1Q15648 1581 aaPredicted RBP17.58■□□□□ 0.4
NIF3L1-201ENST00000359683 STK26Q9P289 416 aa17.57■□□□□ 0.4
NIF3L1-201ENST00000359683 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
NIF3L1-201ENST00000359683 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
NIF3L1-201ENST00000359683 TRAK1Q9UPV9 953 aa17.55■□□□□ 0.4
NIF3L1-201ENST00000359683 SOCS7O14512 581 aa17.54■□□□□ 0.4
NIF3L1-201ENST00000359683 TECPR2O15040 1411 aa17.54■□□□□ 0.4
NIF3L1-201ENST00000359683 DLC1Q96QB1 1528 aa17.52■□□□□ 0.4
NIF3L1-201ENST00000359683 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.4
NIF3L1-201ENST00000359683 NWD1Q149M9 1564 aa17.52■□□□□ 0.39
NIF3L1-201ENST00000359683 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
NIF3L1-201ENST00000359683 USP47Q96K76 1375 aa17.51■□□□□ 0.39
NIF3L1-201ENST00000359683 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
NIF3L1-201ENST00000359683 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms