RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ARHGAP23Q9P227 1491 aa22.06■■□□□ 1.12
TPM1-206ENST00000358278 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
TPM1-206ENST00000358278 HSPA2P54652 639 aa22.05■■□□□ 1.12
TPM1-206ENST00000358278 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
TPM1-206ENST00000358278 RPGRIP1LQ68CZ1 1315 aa22.02■■□□□ 1.12
TPM1-206ENST00000358278 EID1Q9Y6B2 187 aa22.02■■□□□ 1.12
TPM1-206ENST00000358278 SCAF11Q99590 1463 aaKnown RBP22.02■■□□□ 1.12
TPM1-206ENST00000358278 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
TPM1-206ENST00000358278 PPP1R15AO75807 674 aaPredicted RBP22■■□□□ 1.11
TPM1-206ENST00000358278 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
TPM1-206ENST00000358278 NUTM2DQ5VT03 806 aaPredicted RBP22■■□□□ 1.11
TPM1-206ENST00000358278 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
TPM1-206ENST00000358278 ANKLE2Q86XL3 938 aa21.99■■□□□ 1.11
TPM1-206ENST00000358278 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
TPM1-206ENST00000358278 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
TPM1-206ENST00000358278 MYOM2P54296 1465 aa21.98■■□□□ 1.11
TPM1-206ENST00000358278 IQGAP1P46940 1657 aa21.98■■□□□ 1.11
TPM1-206ENST00000358278 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
TPM1-206ENST00000358278 LTKP29376 864 aa21.97■■□□□ 1.11
TPM1-206ENST00000358278 VGFO15240 615 aaPredicted RBP21.96■■□□□ 1.11
TPM1-206ENST00000358278 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
TPM1-206ENST00000358278 NCKAP5LQ9HCH0 1330 aa21.93■■□□□ 1.1
TPM1-206ENST00000358278 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
TPM1-206ENST00000358278 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
TPM1-206ENST00000358278 PLEKHG1Q9ULL1 1385 aa21.92■■□□□ 1.1
TPM1-206ENST00000358278 NRXN3Q9Y4C0 1643 aa21.92■■□□□ 1.1
TPM1-206ENST00000358278 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
TPM1-206ENST00000358278 MED14O60244 1454 aa21.91■■□□□ 1.1
TPM1-206ENST00000358278 BCANQ96GW7 911 aa21.91■■□□□ 1.1
TPM1-206ENST00000358278 ADGRF5Q8IZF2 1346 aa21.91■■□□□ 1.1
TPM1-206ENST00000358278 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
TPM1-206ENST00000358278 LAMC1P11047 1609 aa21.9■■□□□ 1.1
TPM1-206ENST00000358278 NPHP4O75161 1426 aaPredicted RBP21.9■■□□□ 1.1
TPM1-206ENST00000358278 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
TPM1-206ENST00000358278 PIK3C2GO75747 1445 aa21.89■■□□□ 1.09
TPM1-206ENST00000358278 SETD1AO15047 1707 aaKnown RBP21.87■■□□□ 1.09
TPM1-206ENST00000358278 PRAG1Q86YV5 1406 aa21.87■■□□□ 1.09
TPM1-206ENST00000358278 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
TPM1-206ENST00000358278 KIAA1210Q9ULL0 1709 aa21.87■■□□□ 1.09
TPM1-206ENST00000358278 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
TPM1-206ENST00000358278 ALKQ9UM73 1620 aa21.85■■□□□ 1.09
TPM1-206ENST00000358278 ADAMTS13Q76LX8 1427 aa21.82■■□□□ 1.08
TPM1-206ENST00000358278 SLC26A8Q96RN1 970 aa21.8■■□□□ 1.08
TPM1-206ENST00000358278 DMRT2Q9Y5R5 561 aa21.8■■□□□ 1.08
TPM1-206ENST00000358278 CHD2O14647 1828 aaKnown RBP21.79■■□□□ 1.08
TPM1-206ENST00000358278 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
TPM1-206ENST00000358278 NBPF8Q3BBV2 869 aa21.77■■□□□ 1.08
TPM1-206ENST00000358278 C14orf93Q9H972 538 aaKnown RBP21.77■■□□□ 1.08
TPM1-206ENST00000358278 TBX22Q9Y458 520 aa21.75■■□□□ 1.07
TPM1-206ENST00000358278 ASXL1Q8IXJ9 1541 aa21.75■■□□□ 1.07
TPM1-206ENST00000358278 RALGAPBQ86X10 1494 aa21.75■■□□□ 1.07
TPM1-206ENST00000358278 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
TPM1-206ENST00000358278 ADGRB1O14514 1584 aa21.73■■□□□ 1.07
TPM1-206ENST00000358278 ROCK2O75116 1388 aaKnown RBP21.73■■□□□ 1.07
TPM1-206ENST00000358278 METP08581 1390 aa21.73■■□□□ 1.07
TPM1-206ENST00000358278 KNDC1Q76NI1 1749 aa21.72■■□□□ 1.07
TPM1-206ENST00000358278 PIK3R4Q99570 1358 aa21.71■■□□□ 1.07
TPM1-206ENST00000358278 STRCP1A6NGW2 1772 aa21.71■■□□□ 1.07
TPM1-206ENST00000358278 XRN1Q8IZH2 1706 aaKnown RBP21.71■■□□□ 1.07
TPM1-206ENST00000358278 TMEM132EQ6IEE7 984 aa21.7■■□□□ 1.06
TPM1-206ENST00000358278 NWD1Q149M9 1564 aa21.7■■□□□ 1.06
TPM1-206ENST00000358278 NBPF1Q3BBV0 1214 aa21.69■■□□□ 1.06
TPM1-206ENST00000358278 YTHDC2Q9H6S0 1430 aaKnown RBP21.68■■□□□ 1.06
TPM1-206ENST00000358278 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
TPM1-206ENST00000358278 PTPRUQ92729 1446 aa21.67■■□□□ 1.06
TPM1-206ENST00000358278 GPRASP1Q5JY77 1395 aa21.65■■□□□ 1.06
TPM1-206ENST00000358278 STK26Q9P289 416 aa21.65■■□□□ 1.06
TPM1-206ENST00000358278 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
TPM1-206ENST00000358278 CARD11Q9BXL7 1154 aa21.64■■□□□ 1.06
TPM1-206ENST00000358278 CPS1P31327 1500 aa21.64■■□□□ 1.05
TPM1-206ENST00000358278 ZNF335Q9H4Z2 1342 aaPredicted RBP21.64■■□□□ 1.05
TPM1-206ENST00000358278 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
TPM1-206ENST00000358278 NKTRP30414 1462 aaKnown RBP21.63■■□□□ 1.05
TPM1-206ENST00000358278 KCNA6P17658 529 aa21.63■■□□□ 1.05
TPM1-206ENST00000358278 TECPR2O15040 1411 aa21.61■■□□□ 1.05
TPM1-206ENST00000358278 PTCH1Q13635 1447 aa21.61■■□□□ 1.05
TPM1-206ENST00000358278 TRAK1Q9UPV9 953 aa21.6■■□□□ 1.05
TPM1-206ENST00000358278 DLC1Q96QB1 1528 aa21.6■■□□□ 1.05
TPM1-206ENST00000358278 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
TPM1-206ENST00000358278 QRICH2Q9H0J4 1663 aa21.58■■□□□ 1.05
TPM1-206ENST00000358278 EIF3AQ14152 1382 aaKnown RBP21.58■■□□□ 1.04
TPM1-206ENST00000358278 XIRP1Q702N8 1843 aaKnown RBP21.57■■□□□ 1.04
TPM1-206ENST00000358278 ROBO2Q9HCK4 1378 aa21.57■■□□□ 1.04
TPM1-206ENST00000358278 LTBP4Q8N2S1 1624 aa21.56■■□□□ 1.04
TPM1-206ENST00000358278 USP47Q96K76 1375 aa21.55■■□□□ 1.04
TPM1-206ENST00000358278 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
TPM1-206ENST00000358278 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
TPM1-206ENST00000358278 PROSER2Q86WR7 435 aaPredicted RBP21.53■■□□□ 1.04
TPM1-206ENST00000358278 POGKQ9P215 609 aa21.53■■□□□ 1.04
TPM1-206ENST00000358278 PRAM1Q96QH2 718 aa21.52■■□□□ 1.04
TPM1-206ENST00000358278 LRRC7Q96NW7 1537 aa21.52■■□□□ 1.04
TPM1-206ENST00000358278 WAPLQ7Z5K2 1190 aa21.51■■□□□ 1.03
TPM1-206ENST00000358278 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.51■■□□□ 1.03
TPM1-206ENST00000358278 PLEKHH1Q9ULM0 1364 aa21.51■■□□□ 1.03
TPM1-206ENST00000358278 SAFB2Q14151 953 aaKnown RBP eCLIP21.5■■□□□ 1.03
TPM1-206ENST00000358278 SIRT1Q96EB6 747 aa21.5■■□□□ 1.03
TPM1-206ENST00000358278 CENPJQ9HC77 1338 aaPredicted RBP21.5■■□□□ 1.03
TPM1-206ENST00000358278 TMEM94Q12767 1356 aa21.49■■□□□ 1.03
TPM1-206ENST00000358278 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
TPM1-206ENST00000358278 EIF4G2P78344 907 aaKnown RBP eCLIP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms