RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 NUCB2P80303 420 aa19.2■□□□□ 0.66
TRAPPC11-202ENST00000357207 API5Q9BZZ5 524 aaKnown RBP19.2■□□□□ 0.66
TRAPPC11-202ENST00000357207 HSP90B1P14625 803 aaKnown RBP19.2■□□□□ 0.66
TRAPPC11-202ENST00000357207 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
TRAPPC11-202ENST00000357207 DIAPH1O60610 1272 aaKnown RBP19.19■□□□□ 0.66
TRAPPC11-202ENST00000357207 FAM13BQ9NYF5 915 aa19.18■□□□□ 0.66
TRAPPC11-202ENST00000357207 TRAK2O60296 914 aa19.18■□□□□ 0.66
TRAPPC11-202ENST00000357207 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
TRAPPC11-202ENST00000357207 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
TRAPPC11-202ENST00000357207 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
TRAPPC11-202ENST00000357207 HFM1A2PYH4 1435 aa19.17■□□□□ 0.66
TRAPPC11-202ENST00000357207 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC11-202ENST00000357207 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
TRAPPC11-202ENST00000357207 AMPHP49418 695 aa19.16■□□□□ 0.66
TRAPPC11-202ENST00000357207 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
TRAPPC11-202ENST00000357207 PPP2R1AP30153 589 aa19.16■□□□□ 0.66
TRAPPC11-202ENST00000357207 TULP1O00294 542 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-202ENST00000357207 ANO8Q9HCE9 1232 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-202ENST00000357207 PTPRGP23470 1445 aa19.15■□□□□ 0.66
TRAPPC11-202ENST00000357207 TCP11L2Q8N4U5 519 aa19.14■□□□□ 0.65
TRAPPC11-202ENST00000357207 CFTRP13569 1480 aa19.14■□□□□ 0.65
TRAPPC11-202ENST00000357207 GORABQ5T7V8 394 aa19.13■□□□□ 0.65
TRAPPC11-202ENST00000357207 TNNT3P45378 269 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC11-202ENST00000357207 NGDNQ8NEJ9 315 aaKnown RBP19.13■□□□□ 0.65
TRAPPC11-202ENST00000357207 CCDC34Q96HJ3 373 aa19.13■□□□□ 0.65
TRAPPC11-202ENST00000357207 COG3Q96JB2 828 aa19.13■□□□□ 0.65
TRAPPC11-202ENST00000357207 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
TRAPPC11-202ENST00000357207 SF3A1Q15459 793 aaKnown RBP19.12■□□□□ 0.65
TRAPPC11-202ENST00000357207 INTS3Q68E01 1043 aaKnown RBP19.12■□□□□ 0.65
TRAPPC11-202ENST00000357207 MCTP1Q6DN14 999 aa19.12■□□□□ 0.65
TRAPPC11-202ENST00000357207 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC11-202ENST00000357207 GOLGA6L19H0YKK7 550 aa19.11■□□□□ 0.65
TRAPPC11-202ENST00000357207 NASPP49321 788 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC11-202ENST00000357207 NBPF1Q3BBV0 1214 aa19.11■□□□□ 0.65
TRAPPC11-202ENST00000357207 BECN2A8MW95 431 aa19.1■□□□□ 0.65
TRAPPC11-202ENST00000357207 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
TRAPPC11-202ENST00000357207 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
TRAPPC11-202ENST00000357207 CHMP3Q9Y3E7 222 aa19.1■□□□□ 0.65
TRAPPC11-202ENST00000357207 BCAR3O75815 825 aa19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 MTHFSP49914 203 aa19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 H3BQV1 296 aa19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 GNAI1P63096 354 aa19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 IFFO2Q5TF58 517 aa19.09■□□□□ 0.65
TRAPPC11-202ENST00000357207 NPHP1O15259 732 aa19.08■□□□□ 0.65
TRAPPC11-202ENST00000357207 CDC45O75419 566 aa19.07■□□□□ 0.64
TRAPPC11-202ENST00000357207 FAM184AQ8NB25 1140 aa19.07■□□□□ 0.64
TRAPPC11-202ENST00000357207 RUFY2Q8WXA3 655 aa19.07■□□□□ 0.64
TRAPPC11-202ENST00000357207 ROCK1Q13464 1354 aa19.07■□□□□ 0.64
TRAPPC11-202ENST00000357207 ZKSCAN1P17029 563 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC11-202ENST00000357207 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC11-202ENST00000357207 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
TRAPPC11-202ENST00000357207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
TRAPPC11-202ENST00000357207 KIAA1107Q9UPP5 1409 aa19.05■□□□□ 0.64
TRAPPC11-202ENST00000357207 CSB-PGBD3P0DP91 1061 aa19.04■□□□□ 0.64
TRAPPC11-202ENST00000357207 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
TRAPPC11-202ENST00000357207 R3HCC1Q9Y3T6 440 aaKnown RBP19.03■□□□□ 0.64
TRAPPC11-202ENST00000357207 NCAPD3P42695 1498 aa19.02■□□□□ 0.64
TRAPPC11-202ENST00000357207 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
TRAPPC11-202ENST00000357207 CHMP4CQ96CF2 233 aa19.02■□□□□ 0.64
TRAPPC11-202ENST00000357207 GOLGA6L1Q8N7Z2 621 aa19.02■□□□□ 0.63
TRAPPC11-202ENST00000357207 EXOSC9Q06265 439 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 NAIPQ13075 1403 aa19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 ZNF592Q92610 1267 aa19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 ISY1Q9ULR0 285 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 CAVIN1Q6NZI2 390 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 RNF214Q8ND24 703 aa19.01■□□□□ 0.63
TRAPPC11-202ENST00000357207 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
TRAPPC11-202ENST00000357207 MAP7D2Q96T17 732 aa19■□□□□ 0.63
TRAPPC11-202ENST00000357207 VPS37CA5D8V6 355 aaPredicted RBP19■□□□□ 0.63
TRAPPC11-202ENST00000357207 HMOX1P09601 288 aa19■□□□□ 0.63
TRAPPC11-202ENST00000357207 CCDC39Q9UFE4 941 aa18.98■□□□□ 0.63
TRAPPC11-202ENST00000357207 MBD3O95983 291 aa18.98■□□□□ 0.63
TRAPPC11-202ENST00000357207 TEFQ10587 303 aa18.98■□□□□ 0.63
TRAPPC11-202ENST00000357207 BICD2Q8TD16 824 aa18.98■□□□□ 0.63
TRAPPC11-202ENST00000357207 MCM4P33991 863 aa18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 EFCAB5A4FU69 1503 aa18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 TPM2P07951 284 aa18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 ZNF771Q7L3S4 317 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 EID1Q9Y6B2 187 aa18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 TPM3P06753 285 aa18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 MTERF4Q7Z6M4 381 aaKnown RBP18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 RABEP1Q15276 862 aa18.97■□□□□ 0.63
TRAPPC11-202ENST00000357207 TMEM132EQ6IEE7 984 aa18.96■□□□□ 0.63
TRAPPC11-202ENST00000357207 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRAPPC11-202ENST00000357207 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
TRAPPC11-202ENST00000357207 IFIT2P09913 472 aaKnown RBP18.96■□□□□ 0.63
TRAPPC11-202ENST00000357207 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
TRAPPC11-202ENST00000357207 NECTIN2Q92692 538 aa18.96■□□□□ 0.63
TRAPPC11-202ENST00000357207 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
TRAPPC11-202ENST00000357207 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
TRAPPC11-202ENST00000357207 GCC1Q96CN9 775 aa18.95■□□□□ 0.62
TRAPPC11-202ENST00000357207 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
TRAPPC11-202ENST00000357207 CREBRFQ8IUR6 639 aa18.94■□□□□ 0.62
TRAPPC11-202ENST00000357207 PRPF40AO75400 957 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms