RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 FAM13BQ9NYF5 915 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 WDR62O43379 1518 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 FANCD2Q9BXW9 1451 aa9.94□□□□□ -0.82
CD46-203ENST00000354848 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
CD46-203ENST00000354848 PANK1Q8TE04 598 aa9.94□□□□□ -0.82
CD46-203ENST00000354848 PPP1R9BQ96SB3 815 aa9.94□□□□□ -0.82
CD46-203ENST00000354848 SMAP1Q8IYB5 467 aaPredicted RBP9.93□□□□□ -0.82
CD46-203ENST00000354848 C22orf23Q9BZE7 217 aa9.93□□□□□ -0.82
CD46-203ENST00000354848 LAMC3Q9Y6N6 1575 aa9.93□□□□□ -0.82
CD46-203ENST00000354848 PPP2R1AP30153 589 aa9.93□□□□□ -0.82
CD46-203ENST00000354848 KDM5DQ9BY66 1539 aa9.93□□□□□ -0.82
CD46-203ENST00000354848 CROCC2H7BZ55 1655 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 ADGRL2O95490 1459 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 MSNP26038 577 aaKnown RBP9.92□□□□□ -0.82
CD46-203ENST00000354848 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 TESK2Q96S53 571 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 DDIT3P35638 169 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 PMFBP1Q8TBY8 1022 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
CD46-203ENST00000354848 R3HCC1Q9Y3T6 440 aaKnown RBP9.92□□□□□ -0.82
CD46-203ENST00000354848 CCDC144AA2RUR9 1427 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 PRAG1Q86YV5 1406 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 NCOA3Q9Y6Q9 1424 aa9.92□□□□□ -0.82
CD46-203ENST00000354848 CCDC146Q8IYE0 955 aa9.91□□□□□ -0.82
CD46-203ENST00000354848 NUP155O75694 1391 aa9.91□□□□□ -0.82
CD46-203ENST00000354848 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
CD46-203ENST00000354848 HSCBQ8IWL3 235 aa9.91□□□□□ -0.82
CD46-203ENST00000354848 ANKRD50Q9ULJ7 1429 aa9.9□□□□□ -0.82
CD46-203ENST00000354848 E9PSI1 815 aa9.9□□□□□ -0.82
CD46-203ENST00000354848 NASPP49321 788 aaPredicted RBP9.9□□□□□ -0.82
CD46-203ENST00000354848 SKOR2Q2VWA4 1001 aaPredicted RBP9.9□□□□□ -0.82
CD46-203ENST00000354848 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
CD46-203ENST00000354848 ANKRD30AQ9BXX3 1397 aa9.9□□□□□ -0.82
CD46-203ENST00000354848 MFAP1P55081 439 aaKnown RBP9.9□□□□□ -0.82
CD46-203ENST00000354848 ERBINQ96RT1 1412 aa9.9□□□□□ -0.83
CD46-203ENST00000354848 APAF1O14727 1248 aa9.9□□□□□ -0.83
CD46-203ENST00000354848 PRDM15P57071 1507 aaPredicted RBP9.89□□□□□ -0.83
CD46-203ENST00000354848 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 GBP4Q96PP9 640 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 DMRT2Q9Y5R5 561 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 GPRASP1Q5JY77 1395 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
CD46-203ENST00000354848 LAMC1P11047 1609 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 UQCRHP07919 91 aa9.89□□□□□ -0.83
CD46-203ENST00000354848 ZHX1Q9UKY1 873 aaPredicted RBP9.89□□□□□ -0.83
CD46-203ENST00000354848 ANP32BQ92688 251 aaKnown RBP9.88□□□□□ -0.83
CD46-203ENST00000354848 ITSN2Q9NZM3 1697 aa9.88□□□□□ -0.83
CD46-203ENST00000354848 MTERF4Q7Z6M4 381 aaKnown RBP9.88□□□□□ -0.83
CD46-203ENST00000354848 TDRD9Q8NDG6 1382 aaKnown RBP9.88□□□□□ -0.83
CD46-203ENST00000354848 ABCC2Q92887 1545 aa9.88□□□□□ -0.83
CD46-203ENST00000354848 ARID3AQ99856 593 aa9.88□□□□□ -0.83
CD46-203ENST00000354848 MAGI2Q86UL8 1455 aa9.88□□□□□ -0.83
CD46-203ENST00000354848 SCAPERQ9BY12 1400 aa9.87□□□□□ -0.83
CD46-203ENST00000354848 TMF1P82094 1093 aa9.87□□□□□ -0.83
CD46-203ENST00000354848 RAB3GAP1Q15042 981 aa9.87□□□□□ -0.83
CD46-203ENST00000354848 PRDM10Q9NQV6 1147 aa9.87□□□□□ -0.83
CD46-203ENST00000354848 PTMSP20962 102 aa9.87□□□□□ -0.83
CD46-203ENST00000354848 ZNF500O60304 480 aaPredicted RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 SLC24A1O60721 1099 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 SMC5Q8IY18 1101 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 KNSTRNQ9Y448 316 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 PIK3C2GO75747 1445 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 IQGAP2Q13576 1575 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 CFDP1Q9UEE9 299 aaPredicted RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 FAM135AQ9P2D6 1515 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 DYNC1I1O14576 645 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 XPCQ01831 940 aaPredicted RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 HS1BP3Q53T59 392 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 RWDD1Q9H446 243 aaPredicted RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 NOL7Q9UMY1 257 aaKnown RBP9.86□□□□□ -0.83
CD46-203ENST00000354848 WDR7Q9Y4E6 1490 aa9.86□□□□□ -0.83
CD46-203ENST00000354848 RLBP1P12271 317 aa9.85□□□□□ -0.83
CD46-203ENST00000354848 UTP14CQ5TAP6 766 aaKnown RBP9.85□□□□□ -0.83
CD46-203ENST00000354848 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.85□□□□□ -0.83
CD46-203ENST00000354848 IBTKQ9P2D0 1353 aaPredicted RBP9.85□□□□□ -0.83
CD46-203ENST00000354848 DMTNQ08495 405 aa9.85□□□□□ -0.83
CD46-203ENST00000354848 SNX21Q969T3 373 aa9.85□□□□□ -0.83
CD46-203ENST00000354848 TNNQ9UQP3 1299 aa9.85□□□□□ -0.83
CD46-203ENST00000354848 ZNF777Q9ULD5 760 aaPredicted RBP9.84□□□□□ -0.83
CD46-203ENST00000354848 ABCC10Q5T3U5 1492 aa9.84□□□□□ -0.83
CD46-203ENST00000354848 RGL3Q3MIN7 710 aa9.83□□□□□ -0.84
CD46-203ENST00000354848 MYO5CQ9NQX4 1742 aa9.83□□□□□ -0.84
CD46-203ENST00000354848 AK9Q5TCS8 1911 aa9.83□□□□□ -0.84
CD46-203ENST00000354848 HSP90AB1P08238 724 aaKnown RBP9.83□□□□□ -0.84
CD46-203ENST00000354848 ZSCAN20P17040 1043 aaPredicted RBP9.83□□□□□ -0.84
CD46-203ENST00000354848 SHROOM2Q13796 1616 aa9.83□□□□□ -0.84
CD46-203ENST00000354848 GPATCH8Q9UKJ3 1502 aaKnown RBP9.83□□□□□ -0.84
CD46-203ENST00000354848 PTPRGP23470 1445 aa9.83□□□□□ -0.84
CD46-203ENST00000354848 NUP153P49790 1475 aaKnown RBP9.83□□□□□ -0.84
CD46-203ENST00000354848 RBM25P49756 843 aaKnown RBP9.82□□□□□ -0.84
CD46-203ENST00000354848 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
CD46-203ENST00000354848 PDE4CQ08493 712 aa9.82□□□□□ -0.84
CD46-203ENST00000354848 KLHL40Q2TBA0 621 aa9.82□□□□□ -0.84
CD46-203ENST00000354848 CCDC94Q9BW85 323 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms