RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
PTPN2-203ENST00000353319 PIK3C2BO00750 1634 aa14.54□□□□□ -0.08
PTPN2-203ENST00000353319 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
PTPN2-203ENST00000353319 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
PTPN2-203ENST00000353319 SIGLEC1Q9BZZ2 1709 aa14.53□□□□□ -0.08
PTPN2-203ENST00000353319 SLC52A1Q9NWF4 448 aa14.53□□□□□ -0.08
PTPN2-203ENST00000353319 MROH2AA6NES4 1674 aa14.53□□□□□ -0.08
PTPN2-203ENST00000353319 IQGAP1P46940 1657 aa14.53□□□□□ -0.08
PTPN2-203ENST00000353319 SCAF11Q99590 1463 aaKnown RBP14.53□□□□□ -0.08
PTPN2-203ENST00000353319 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
PTPN2-203ENST00000353319 SYNMO15061 1565 aa14.51□□□□□ -0.09
PTPN2-203ENST00000353319 CFAP65Q6ZU64 1925 aaKnown RBP14.51□□□□□ -0.09
PTPN2-203ENST00000353319 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
PTPN2-203ENST00000353319 PPLO60437 1756 aa14.5□□□□□ -0.09
PTPN2-203ENST00000353319 TMF1P82094 1093 aa14.5□□□□□ -0.09
PTPN2-203ENST00000353319 ARHGEF40Q8TER5 1519 aa14.48□□□□□ -0.09
PTPN2-203ENST00000353319 SETBP1Q9Y6X0 1596 aa14.48□□□□□ -0.09
PTPN2-203ENST00000353319 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
PTPN2-203ENST00000353319 IDI1Q13907 227 aa14.47□□□□□ -0.09
PTPN2-203ENST00000353319 CFAP70Q5T0N1 1121 aa14.47□□□□□ -0.09
PTPN2-203ENST00000353319 C14orf93Q9H972 538 aaKnown RBP14.47□□□□□ -0.09
PTPN2-203ENST00000353319 PREX1Q8TCU6 1659 aa14.47□□□□□ -0.09
PTPN2-203ENST00000353319 ZFYVE9O95405 1425 aa14.47□□□□□ -0.09
PTPN2-203ENST00000353319 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
PTPN2-203ENST00000353319 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
PTPN2-203ENST00000353319 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
PTPN2-203ENST00000353319 PIK3C2GO75747 1445 aa14.46□□□□□ -0.09
PTPN2-203ENST00000353319 DISP3Q9P2K9 1392 aa14.46□□□□□ -0.09
PTPN2-203ENST00000353319 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.1
PTPN2-203ENST00000353319 CDCA8Q53HL2 280 aa14.46□□□□□ -0.1
PTPN2-203ENST00000353319 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.1
PTPN2-203ENST00000353319 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
PTPN2-203ENST00000353319 NEXMIFQ5QGS0 1516 aa14.43□□□□□ -0.1
PTPN2-203ENST00000353319 ERVK-7P63135 1459 aa14.43□□□□□ -0.1
PTPN2-203ENST00000353319 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
PTPN2-203ENST00000353319 RALBP1Q15311 655 aa14.42□□□□□ -0.1
PTPN2-203ENST00000353319 SBNO2Q9Y2G9 1366 aa14.42□□□□□ -0.1
PTPN2-203ENST00000353319 TMEM131LA2VDJ0 1609 aa14.42□□□□□ -0.1
PTPN2-203ENST00000353319 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
PTPN2-203ENST00000353319 CCDC184Q52MB2 194 aa14.41□□□□□ -0.1
PTPN2-203ENST00000353319 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
PTPN2-203ENST00000353319 ADGRB1O14514 1584 aa14.4□□□□□ -0.1
PTPN2-203ENST00000353319 SPATA31D1Q6ZQQ2 1576 aa14.4□□□□□ -0.1
PTPN2-203ENST00000353319 CLTCQ00610 1675 aaKnown RBP14.4□□□□□ -0.1
PTPN2-203ENST00000353319 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
PTPN2-203ENST00000353319 PANK3Q9H999 370 aa14.37□□□□□ -0.11
PTPN2-203ENST00000353319 ZMYM3Q14202 1370 aa14.36□□□□□ -0.11
PTPN2-203ENST00000353319 PARD3Q8TEW0 1356 aa14.36□□□□□ -0.11
PTPN2-203ENST00000353319 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
PTPN2-203ENST00000353319 MYBBP1AQ9BQG0 1328 aaKnown RBP14.35□□□□□ -0.11
PTPN2-203ENST00000353319 MYO5BQ9ULV0 1848 aa14.35□□□□□ -0.11
PTPN2-203ENST00000353319 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
PTPN2-203ENST00000353319 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
PTPN2-203ENST00000353319 MLECQ14165 292 aa14.34□□□□□ -0.11
PTPN2-203ENST00000353319 PUS7Q96PZ0 661 aaKnown RBP14.34□□□□□ -0.11
PTPN2-203ENST00000353319 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
PTPN2-203ENST00000353319 KDM5AP29375 1690 aaKnown RBP14.33□□□□□ -0.12
PTPN2-203ENST00000353319 A2ML1A8K2U0 1454 aa14.32□□□□□ -0.12
PTPN2-203ENST00000353319 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPN2-203ENST00000353319 TMEM132EQ6IEE7 984 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 PNISRQ8TF01 805 aaKnown RBP14.31□□□□□ -0.12
PTPN2-203ENST00000353319 TRAK1Q9UPV9 953 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 NPC1L1Q9UHC9 1359 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
PTPN2-203ENST00000353319 MYOM1P52179 1685 aa14.3□□□□□ -0.12
PTPN2-203ENST00000353319 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
PTPN2-203ENST00000353319 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
PTPN2-203ENST00000353319 QRICH2Q9H0J4 1663 aa14.28□□□□□ -0.12
PTPN2-203ENST00000353319 LRPPRCP42704 1394 aaKnown RBP14.28□□□□□ -0.12
PTPN2-203ENST00000353319 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
PTPN2-203ENST00000353319 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.12
PTPN2-203ENST00000353319 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTPN2-203ENST00000353319 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.13
PTPN2-203ENST00000353319 ALKQ9UM73 1620 aa14.27□□□□□ -0.13
PTPN2-203ENST00000353319 ASXL1Q8IXJ9 1541 aa14.27□□□□□ -0.13
PTPN2-203ENST00000353319 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.13
PTPN2-203ENST00000353319 TNRQ92752 1358 aa14.26□□□□□ -0.13
PTPN2-203ENST00000353319 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
PTPN2-203ENST00000353319 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
PTPN2-203ENST00000353319 INSRP06213 1382 aa14.25□□□□□ -0.13
PTPN2-203ENST00000353319 CNGB1Q14028 1251 aaPredicted RBP14.25□□□□□ -0.13
PTPN2-203ENST00000353319 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
PTPN2-203ENST00000353319 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
PTPN2-203ENST00000353319 YTHDC2Q9H6S0 1430 aaKnown RBP14.24□□□□□ -0.13
PTPN2-203ENST00000353319 PTPRMP28827 1452 aa14.22□□□□□ -0.13
PTPN2-203ENST00000353319 NLRP1Q9C000 1473 aa14.22□□□□□ -0.13
PTPN2-203ENST00000353319 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
PTPN2-203ENST00000353319 DLC1Q96QB1 1528 aa14.21□□□□□ -0.13
PTPN2-203ENST00000353319 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
PTPN2-203ENST00000353319 TULP4Q9NRJ4 1543 aa14.2□□□□□ -0.14
PTPN2-203ENST00000353319 ABCC11Q96J66 1382 aa14.2□□□□□ -0.14
PTPN2-203ENST00000353319 SETD1AO15047 1707 aaKnown RBP14.19□□□□□ -0.14
PTPN2-203ENST00000353319 UBR1Q8IWV7 1749 aa14.19□□□□□ -0.14
PTPN2-203ENST00000353319 PPP2R1AP30153 589 aa14.19□□□□□ -0.14
PTPN2-203ENST00000353319 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
PTPN2-203ENST00000353319 TMEM2Q9UHN6 1383 aa14.19□□□□□ -0.14
PTPN2-203ENST00000353319 NINLQ9Y2I6 1382 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms