RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
PTPN2-203ENST00000353319 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
PTPN2-203ENST00000353319 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
PTPN2-203ENST00000353319 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
PTPN2-203ENST00000353319 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
PTPN2-203ENST00000353319 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
PTPN2-203ENST00000353319 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
PTPN2-203ENST00000353319 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
PTPN2-203ENST00000353319 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
PTPN2-203ENST00000353319 ABCC9O60706 1549 aa19.03■□□□□ 0.64
PTPN2-203ENST00000353319 NACADO15069 1562 aa18.94■□□□□ 0.62
PTPN2-203ENST00000353319 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
PTPN2-203ENST00000353319 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
PTPN2-203ENST00000353319 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
PTPN2-203ENST00000353319 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
PTPN2-203ENST00000353319 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
PTPN2-203ENST00000353319 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
PTPN2-203ENST00000353319 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
PTPN2-203ENST00000353319 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
PTPN2-203ENST00000353319 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
PTPN2-203ENST00000353319 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
PTPN2-203ENST00000353319 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
PTPN2-203ENST00000353319 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
PTPN2-203ENST00000353319 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
PTPN2-203ENST00000353319 WIZO95785 1651 aa17.95■□□□□ 0.46
PTPN2-203ENST00000353319 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
PTPN2-203ENST00000353319 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
PTPN2-203ENST00000353319 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
PTPN2-203ENST00000353319 SMARCA2P51531 1590 aa17.64■□□□□ 0.42
PTPN2-203ENST00000353319 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
PTPN2-203ENST00000353319 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
PTPN2-203ENST00000353319 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
PTPN2-203ENST00000353319 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
PTPN2-203ENST00000353319 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
PTPN2-203ENST00000353319 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
PTPN2-203ENST00000353319 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
PTPN2-203ENST00000353319 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
PTPN2-203ENST00000353319 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
PTPN2-203ENST00000353319 FOXD1Q16676 465 aa17.2■□□□□ 0.34
PTPN2-203ENST00000353319 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
PTPN2-203ENST00000353319 CFTRP13569 1480 aa17.15■□□□□ 0.34
PTPN2-203ENST00000353319 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
PTPN2-203ENST00000353319 EEA1Q15075 1411 aa17.09■□□□□ 0.33
PTPN2-203ENST00000353319 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
PTPN2-203ENST00000353319 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
PTPN2-203ENST00000353319 TOP2BQ02880 1626 aa17.02■□□□□ 0.32
PTPN2-203ENST00000353319 PRDM2Q13029 1718 aa17.02■□□□□ 0.31
PTPN2-203ENST00000353319 SOGA1O94964 1423 aa17.01■□□□□ 0.31
PTPN2-203ENST00000353319 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
PTPN2-203ENST00000353319 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
PTPN2-203ENST00000353319 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
PTPN2-203ENST00000353319 CUX1P39880 1505 aa16.92■□□□□ 0.3
PTPN2-203ENST00000353319 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
PTPN2-203ENST00000353319 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
PTPN2-203ENST00000353319 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
PTPN2-203ENST00000353319 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
PTPN2-203ENST00000353319 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
PTPN2-203ENST00000353319 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PTPN2-203ENST00000353319 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
PTPN2-203ENST00000353319 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
PTPN2-203ENST00000353319 NESP48681 1621 aa16.77■□□□□ 0.28
PTPN2-203ENST00000353319 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
PTPN2-203ENST00000353319 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
PTPN2-203ENST00000353319 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
PTPN2-203ENST00000353319 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
PTPN2-203ENST00000353319 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
PTPN2-203ENST00000353319 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
PTPN2-203ENST00000353319 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
PTPN2-203ENST00000353319 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
PTPN2-203ENST00000353319 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
PTPN2-203ENST00000353319 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
PTPN2-203ENST00000353319 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
PTPN2-203ENST00000353319 TRIM26Q12899 539 aaPredicted RBP16.64■□□□□ 0.25
PTPN2-203ENST00000353319 CUX2O14529 1486 aa16.62■□□□□ 0.25
PTPN2-203ENST00000353319 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
PTPN2-203ENST00000353319 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
PTPN2-203ENST00000353319 IGF1RP08069 1367 aa16.6■□□□□ 0.25
PTPN2-203ENST00000353319 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
PTPN2-203ENST00000353319 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
PTPN2-203ENST00000353319 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
PTPN2-203ENST00000353319 CLIP1P30622 1438 aa16.53■□□□□ 0.24
PTPN2-203ENST00000353319 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
PTPN2-203ENST00000353319 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
PTPN2-203ENST00000353319 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
PTPN2-203ENST00000353319 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
PTPN2-203ENST00000353319 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
PTPN2-203ENST00000353319 CUL7Q14999 1698 aa16.41■□□□□ 0.22
PTPN2-203ENST00000353319 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
PTPN2-203ENST00000353319 MSH5O43196 834 aa16.41■□□□□ 0.22
PTPN2-203ENST00000353319 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
PTPN2-203ENST00000353319 WDR62O43379 1518 aa16.38■□□□□ 0.21
PTPN2-203ENST00000353319 GAPVD1Q14C86 1478 aa16.38■□□□□ 0.21
PTPN2-203ENST00000353319 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
PTPN2-203ENST00000353319 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
PTPN2-203ENST00000353319 HRCP23327 699 aa16.34■□□□□ 0.21
PTPN2-203ENST00000353319 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
PTPN2-203ENST00000353319 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
PTPN2-203ENST00000353319 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
PTPN2-203ENST00000353319 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
PTPN2-203ENST00000353319 RANGAP1P46060 587 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms