RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CBX1P83916 185 aa16.63■□□□□ 0.25
IFT88-202ENST00000351808 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
IFT88-202ENST00000351808 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
IFT88-202ENST00000351808 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
IFT88-202ENST00000351808 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
IFT88-202ENST00000351808 RTEL1-TNFRSF6BF6WH68 1400 aa16.61■□□□□ 0.25
IFT88-202ENST00000351808 HS1BP3Q53T59 392 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 SASS6Q6UVJ0 657 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
IFT88-202ENST00000351808 VGLL3A8MV65 326 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 KIF20AO95235 890 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 PKD2Q13563 968 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
IFT88-202ENST00000351808 PANK3Q9H999 370 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 PDE3AQ14432 1141 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 GTPBP4Q9BZE4 634 aaKnown RBP16.6■□□□□ 0.25
IFT88-202ENST00000351808 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
IFT88-202ENST00000351808 PZPP20742 1482 aa16.59■□□□□ 0.25
IFT88-202ENST00000351808 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
IFT88-202ENST00000351808 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
IFT88-202ENST00000351808 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
IFT88-202ENST00000351808 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
IFT88-202ENST00000351808 UHRF1BP1Q6BDS2 1440 aa16.59■□□□□ 0.25
IFT88-202ENST00000351808 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
IFT88-202ENST00000351808 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
IFT88-202ENST00000351808 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
IFT88-202ENST00000351808 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
IFT88-202ENST00000351808 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
IFT88-202ENST00000351808 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
IFT88-202ENST00000351808 TSC1Q92574 1164 aa16.57■□□□□ 0.24
IFT88-202ENST00000351808 NKTRP30414 1462 aaKnown RBP16.56■□□□□ 0.24
IFT88-202ENST00000351808 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
IFT88-202ENST00000351808 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
IFT88-202ENST00000351808 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
IFT88-202ENST00000351808 ROCK1Q13464 1354 aa16.56■□□□□ 0.24
IFT88-202ENST00000351808 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
IFT88-202ENST00000351808 PTMSP20962 102 aa16.56■□□□□ 0.24
IFT88-202ENST00000351808 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
IFT88-202ENST00000351808 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
IFT88-202ENST00000351808 SMC5Q8IY18 1101 aa16.55■□□□□ 0.24
IFT88-202ENST00000351808 PLCD3Q8N3E9 789 aa16.55■□□□□ 0.24
IFT88-202ENST00000351808 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
IFT88-202ENST00000351808 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
IFT88-202ENST00000351808 DAPK1P53355 1430 aa16.54■□□□□ 0.24
IFT88-202ENST00000351808 PDLIM2Q96JY6 352 aa16.54■□□□□ 0.24
IFT88-202ENST00000351808 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
IFT88-202ENST00000351808 RBSNQ9H1K0 784 aa16.53■□□□□ 0.24
IFT88-202ENST00000351808 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
IFT88-202ENST00000351808 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
IFT88-202ENST00000351808 ZNF644Q9H582 1327 aaPredicted RBP16.53■□□□□ 0.24
IFT88-202ENST00000351808 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 APAF1O14727 1248 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 ZMYM3Q14202 1370 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 ARID3CA6NKF2 412 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 ZBTB22O15209 634 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 SSFA2P28290 1259 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
IFT88-202ENST00000351808 IGSF3O75054 1194 aa16.52■□□□□ 0.23
IFT88-202ENST00000351808 ABCC5O15440 1437 aa16.51■□□□□ 0.23
IFT88-202ENST00000351808 GOLGA6L22H0YM25 854 aa16.51■□□□□ 0.23
IFT88-202ENST00000351808 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
IFT88-202ENST00000351808 PPP2R1AP30153 589 aa16.51■□□□□ 0.23
IFT88-202ENST00000351808 TNNQ9UQP3 1299 aa16.51■□□□□ 0.23
IFT88-202ENST00000351808 CAMSAP2Q08AD1 1489 aa16.5■□□□□ 0.23
IFT88-202ENST00000351808 E9PSI1 815 aa16.5■□□□□ 0.23
IFT88-202ENST00000351808 MYRIPQ8NFW9 859 aa16.5■□□□□ 0.23
IFT88-202ENST00000351808 SNX21Q969T3 373 aa16.5■□□□□ 0.23
IFT88-202ENST00000351808 ZNF445P59923 1031 aa16.49■□□□□ 0.23
IFT88-202ENST00000351808 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
IFT88-202ENST00000351808 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
IFT88-202ENST00000351808 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
IFT88-202ENST00000351808 RLBP1P12271 317 aa16.48■□□□□ 0.23
IFT88-202ENST00000351808 MCM5P33992 734 aa16.48■□□□□ 0.23
IFT88-202ENST00000351808 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
IFT88-202ENST00000351808 GAPVD1Q14C86 1478 aa16.48■□□□□ 0.23
IFT88-202ENST00000351808 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
IFT88-202ENST00000351808 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
IFT88-202ENST00000351808 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
IFT88-202ENST00000351808 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
IFT88-202ENST00000351808 PRIM1P49642 420 aaKnown RBP16.48■□□□□ 0.23
IFT88-202ENST00000351808 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
IFT88-202ENST00000351808 DISP3Q9P2K9 1392 aa16.47■□□□□ 0.23
IFT88-202ENST00000351808 BAG4O95429 457 aaKnown RBP16.47■□□□□ 0.23
IFT88-202ENST00000351808 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
IFT88-202ENST00000351808 SCAPERQ9BY12 1400 aa16.46■□□□□ 0.22
IFT88-202ENST00000351808 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
IFT88-202ENST00000351808 CCDC39Q9UFE4 941 aa16.45■□□□□ 0.22
IFT88-202ENST00000351808 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
IFT88-202ENST00000351808 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
IFT88-202ENST00000351808 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
IFT88-202ENST00000351808 RBM25P49756 843 aaKnown RBP16.44■□□□□ 0.22
IFT88-202ENST00000351808 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
IFT88-202ENST00000351808 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
IFT88-202ENST00000351808 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
IFT88-202ENST00000351808 TESK2Q96S53 571 aa16.42■□□□□ 0.22
IFT88-202ENST00000351808 BCL2L13Q9BXK5 485 aa16.42■□□□□ 0.22
IFT88-202ENST00000351808 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
IFT88-202ENST00000351808 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms