RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 NOS1P29475 1434 aa32.19■■■□□ 2.74
USP25-203ENST00000351097 IFT172Q9UG01 1749 aa32.18■■■□□ 2.74
USP25-203ENST00000351097 ARHGAP31Q2M1Z3 1444 aa32.18■■■□□ 2.74
USP25-203ENST00000351097 COL17A1Q9UMD9 1497 aaPredicted RBP32.18■■■□□ 2.74
USP25-203ENST00000351097 SIGLEC1Q9BZZ2 1709 aa32.18■■■□□ 2.74
USP25-203ENST00000351097 CFAP65Q6ZU64 1925 aaKnown RBP32.18■■■□□ 2.74
USP25-203ENST00000351097 IQGAP1P46940 1657 aa32.17■■■□□ 2.74
USP25-203ENST00000351097 KIAA1210Q9ULL0 1709 aa32.15■■■□□ 2.74
USP25-203ENST00000351097 ADGRF5Q8IZF2 1346 aa32.15■■■□□ 2.74
USP25-203ENST00000351097 DISP3Q9P2K9 1392 aa32.15■■■□□ 2.74
USP25-203ENST00000351097 SCAF11Q99590 1463 aaKnown RBP32.13■■■□□ 2.73
USP25-203ENST00000351097 IRX6P78412 446 aaPredicted RBP32.13■■■□□ 2.73
USP25-203ENST00000351097 NRXN1Q9ULB1 1477 aa32.13■■■□□ 2.73
USP25-203ENST00000351097 CHGAP10645 457 aaKnown RBP32.12■■■□□ 2.73
USP25-203ENST00000351097 REREQ9P2R6 1566 aa32.12■■■□□ 2.73
USP25-203ENST00000351097 SYNMO15061 1565 aa32.11■■■□□ 2.73
USP25-203ENST00000351097 RBM19Q9Y4C8 960 aaKnown RBP32.11■■■□□ 2.73
USP25-203ENST00000351097 PIK3C2BO00750 1634 aa32.1■■■□□ 2.73
USP25-203ENST00000351097 CFAP70Q5T0N1 1121 aa32.08■■■□□ 2.73
USP25-203ENST00000351097 TMF1P82094 1093 aa32.08■■■□□ 2.73
USP25-203ENST00000351097 AGLP35573 1532 aa32.06■■■□□ 2.72
USP25-203ENST00000351097 PPLO60437 1756 aa32.04■■■□□ 2.72
USP25-203ENST00000351097 RPGRIP1LQ68CZ1 1315 aa32.02■■■□□ 2.72
USP25-203ENST00000351097 CNGB1Q14028 1251 aaPredicted RBP32.01■■■□□ 2.72
USP25-203ENST00000351097 PPP4R2Q9NY27 417 aa32.01■■■□□ 2.72
USP25-203ENST00000351097 PIK3C2GO75747 1445 aa31.99■■■□□ 2.71
USP25-203ENST00000351097 EIF3AQ14152 1382 aaKnown RBP31.99■■■□□ 2.71
USP25-203ENST00000351097 IDI1Q13907 227 aa31.98■■■□□ 2.71
USP25-203ENST00000351097 PREX1Q8TCU6 1659 aa31.98■■■□□ 2.71
USP25-203ENST00000351097 ANP32EQ9BTT0 268 aa31.96■■■□□ 2.71
USP25-203ENST00000351097 SLC52A1Q9NWF4 448 aa31.96■■■□□ 2.71
USP25-203ENST00000351097 ARHGEF40Q8TER5 1519 aa31.96■■■□□ 2.71
USP25-203ENST00000351097 PER1O15534 1290 aaPredicted RBP31.95■■■□□ 2.7
USP25-203ENST00000351097 PPP6R1Q9UPN7 881 aa31.95■■■□□ 2.7
USP25-203ENST00000351097 SMG6Q86US8 1419 aaKnown RBP31.94■■■□□ 2.7
USP25-203ENST00000351097 SETBP1Q9Y6X0 1596 aa31.93■■■□□ 2.7
USP25-203ENST00000351097 NEXMIFQ5QGS0 1516 aa31.92■■■□□ 2.7
USP25-203ENST00000351097 KTN1Q86UP2 1357 aaKnown RBP31.92■■■□□ 2.7
USP25-203ENST00000351097 C14orf93Q9H972 538 aaKnown RBP31.91■■■□□ 2.7
USP25-203ENST00000351097 FBXO31Q5XUX0 539 aaPredicted RBP31.9■■■□□ 2.7
USP25-203ENST00000351097 RALBP1Q15311 655 aa31.88■■■□□ 2.69
USP25-203ENST00000351097 PNISRQ8TF01 805 aaKnown RBP31.88■■■□□ 2.69
USP25-203ENST00000351097 PANK3Q9H999 370 aa31.88■■■□□ 2.69
USP25-203ENST00000351097 ERVK-7P63135 1459 aa31.88■■■□□ 2.69
USP25-203ENST00000351097 CDCA8Q53HL2 280 aa31.87■■■□□ 2.69
USP25-203ENST00000351097 ADGRB1O14514 1584 aa31.86■■■□□ 2.69
USP25-203ENST00000351097 TMC1Q8TDI8 760 aa31.86■■■□□ 2.69
USP25-203ENST00000351097 CLTCQ00610 1675 aaKnown RBP31.86■■■□□ 2.69
USP25-203ENST00000351097 VGFO15240 615 aaPredicted RBP31.85■■■□□ 2.69
USP25-203ENST00000351097 TMEM131LA2VDJ0 1609 aa31.84■■■□□ 2.69
USP25-203ENST00000351097 NUTM2DQ5VT03 806 aaPredicted RBP31.84■■■□□ 2.69
USP25-203ENST00000351097 NUDCQ9Y266 331 aa31.84■■■□□ 2.69
USP25-203ENST00000351097 PARD3Q8TEW0 1356 aa31.83■■■□□ 2.69
USP25-203ENST00000351097 MYBBP1AQ9BQG0 1328 aaKnown RBP31.83■■■□□ 2.69
USP25-203ENST00000351097 MYO3AQ8NEV4 1616 aa31.83■■■□□ 2.69
USP25-203ENST00000351097 MLECQ14165 292 aa31.83■■■□□ 2.69
USP25-203ENST00000351097 BRD4O60885 1362 aaPredicted RBP31.81■■■□□ 2.68
USP25-203ENST00000351097 SLC24A1O60721 1099 aa31.8■■■□□ 2.68
USP25-203ENST00000351097 ZFYVE9O95405 1425 aa31.8■■■□□ 2.68
USP25-203ENST00000351097 MYO5BQ9ULV0 1848 aa31.78■■■□□ 2.68
USP25-203ENST00000351097 SBNO2Q9Y2G9 1366 aa31.78■■■□□ 2.68
USP25-203ENST00000351097 TMEM132EQ6IEE7 984 aa31.78■■■□□ 2.68
USP25-203ENST00000351097 LRPPRCP42704 1394 aaKnown RBP31.77■■■□□ 2.68
USP25-203ENST00000351097 TRAK1Q9UPV9 953 aa31.76■■■□□ 2.67
USP25-203ENST00000351097 CENPJQ9HC77 1338 aaPredicted RBP31.75■■■□□ 2.67
USP25-203ENST00000351097 SPATA31D1Q6ZQQ2 1576 aa31.75■■■□□ 2.67
USP25-203ENST00000351097 B4GALNT3Q6L9W6 998 aa31.75■■■□□ 2.67
USP25-203ENST00000351097 MYOM1P52179 1685 aa31.75■■■□□ 2.67
USP25-203ENST00000351097 KDM5AP29375 1690 aaKnown RBP31.74■■■□□ 2.67
USP25-203ENST00000351097 RNF123Q5XPI4 1314 aa31.74■■■□□ 2.67
USP25-203ENST00000351097 CC2D1BQ5T0F9 858 aaKnown RBP31.72■■■□□ 2.67
USP25-203ENST00000351097 FANCIQ9NVI1 1328 aa31.71■■■□□ 2.67
USP25-203ENST00000351097 NLRP13Q86W25 1043 aa31.7■■■□□ 2.66
USP25-203ENST00000351097 KNSTRNQ9Y448 316 aa31.66■■■□□ 2.66
USP25-203ENST00000351097 ZMYM3Q14202 1370 aa31.65■■■□□ 2.66
USP25-203ENST00000351097 QRICH2Q9H0J4 1663 aa31.65■■■□□ 2.66
USP25-203ENST00000351097 STAG3Q9UJ98 1225 aa31.64■■■□□ 2.66
USP25-203ENST00000351097 ESF1Q9H501 851 aaKnown RBP31.64■■■□□ 2.66
USP25-203ENST00000351097 ASXL1Q8IXJ9 1541 aa31.63■■■□□ 2.65
USP25-203ENST00000351097 A2ML1A8K2U0 1454 aa31.62■■■□□ 2.65
USP25-203ENST00000351097 AMER1Q5JTC6 1135 aaPredicted RBP31.62■■■□□ 2.65
USP25-203ENST00000351097 ARHGEF28Q8N1W1 1705 aaKnown RBP31.6■■■□□ 2.65
USP25-203ENST00000351097 SENP3Q9H4L4 574 aaPredicted RBP31.58■■■□□ 2.65
USP25-203ENST00000351097 MSH5O43196 834 aa31.57■■■□□ 2.64
USP25-203ENST00000351097 SENP3-EIF4A1A0A087X0R7 540 aa31.55■■■□□ 2.64
USP25-203ENST00000351097 NPC1L1Q9UHC9 1359 aa31.54■■■□□ 2.64
USP25-203ENST00000351097 ALKQ9UM73 1620 aa31.52■■■□□ 2.64
USP25-203ENST00000351097 RIMS2Q9UQ26 1411 aa31.52■■■□□ 2.64
USP25-203ENST00000351097 CARD14Q9BXL6 1004 aa31.5■■■□□ 2.63
USP25-203ENST00000351097 STK26Q9P289 416 aa31.5■■■□□ 2.63
USP25-203ENST00000351097 TULP4Q9NRJ4 1543 aa31.49■■■□□ 2.63
USP25-203ENST00000351097 YTHDC2Q9H6S0 1430 aaKnown RBP31.49■■■□□ 2.63
USP25-203ENST00000351097 TRHP20396 242 aaPredicted RBP31.48■■■□□ 2.63
USP25-203ENST00000351097 CCDC136Q96JN2 1154 aa31.48■■■□□ 2.63
USP25-203ENST00000351097 PTPRMP28827 1452 aa31.47■■■□□ 2.63
USP25-203ENST00000351097 TNRQ92752 1358 aa31.46■■■□□ 2.63
USP25-203ENST00000351097 PPP2R1AP30153 589 aa31.46■■■□□ 2.63
USP25-203ENST00000351097 EVC2Q86UK5 1308 aa31.46■■■□□ 2.63
USP25-203ENST00000351097 PUS7Q96PZ0 661 aaKnown RBP31.46■■■□□ 2.63
USP25-203ENST00000351097 INSRP06213 1382 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms