RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
RLIM-202ENST00000349225 CFDP1Q9UEE9 299 aaPredicted RBP18.25■□□□□ 0.51
RLIM-202ENST00000349225 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
RLIM-202ENST00000349225 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
RLIM-202ENST00000349225 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
RLIM-202ENST00000349225 MRE11P49959 708 aa18.24■□□□□ 0.51
RLIM-202ENST00000349225 PANK1Q8TE04 598 aa18.24■□□□□ 0.51
RLIM-202ENST00000349225 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
RLIM-202ENST00000349225 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
RLIM-202ENST00000349225 PRDM15P57071 1507 aaPredicted RBP18.23■□□□□ 0.51
RLIM-202ENST00000349225 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
RLIM-202ENST00000349225 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
RLIM-202ENST00000349225 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
RLIM-202ENST00000349225 CLUAP1Q96AJ1 413 aa18.22■□□□□ 0.51
RLIM-202ENST00000349225 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
RLIM-202ENST00000349225 GAS2L3Q86XJ1 694 aa18.22■□□□□ 0.51
RLIM-202ENST00000349225 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.51
RLIM-202ENST00000349225 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
RLIM-202ENST00000349225 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
RLIM-202ENST00000349225 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
RLIM-202ENST00000349225 PTPRGP23470 1445 aa18.19■□□□□ 0.5
RLIM-202ENST00000349225 WDR7Q9Y4E6 1490 aa18.19■□□□□ 0.5
RLIM-202ENST00000349225 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
RLIM-202ENST00000349225 CHD1O14646 1710 aa18.19■□□□□ 0.5
RLIM-202ENST00000349225 APAF1O14727 1248 aa18.18■□□□□ 0.5
RLIM-202ENST00000349225 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
RLIM-202ENST00000349225 PRDM4Q9UKN5 801 aa18.18■□□□□ 0.5
RLIM-202ENST00000349225 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
RLIM-202ENST00000349225 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
RLIM-202ENST00000349225 AMER1Q5JTC6 1135 aaPredicted RBP18.18■□□□□ 0.5
RLIM-202ENST00000349225 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
RLIM-202ENST00000349225 A2MP01023 1474 aa18.17■□□□□ 0.5
RLIM-202ENST00000349225 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
RLIM-202ENST00000349225 ABCC10Q5T3U5 1492 aa18.17■□□□□ 0.5
RLIM-202ENST00000349225 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
RLIM-202ENST00000349225 LAMC1P11047 1609 aa18.16■□□□□ 0.5
RLIM-202ENST00000349225 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
RLIM-202ENST00000349225 PDCL3Q9H2J4 239 aa18.16■□□□□ 0.5
RLIM-202ENST00000349225 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
RLIM-202ENST00000349225 CENPJQ9HC77 1338 aaPredicted RBP18.15■□□□□ 0.5
RLIM-202ENST00000349225 PODXL2Q9NZ53 605 aa18.15■□□□□ 0.5
RLIM-202ENST00000349225 CHMP5Q9NZZ3 219 aa18.15■□□□□ 0.5
RLIM-202ENST00000349225 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
RLIM-202ENST00000349225 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
RLIM-202ENST00000349225 RLBP1P12271 317 aa18.14■□□□□ 0.49
RLIM-202ENST00000349225 DDIT3P35638 169 aa18.13■□□□□ 0.49
RLIM-202ENST00000349225 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
RLIM-202ENST00000349225 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
RLIM-202ENST00000349225 TPM2P07951 284 aa18.13■□□□□ 0.49
RLIM-202ENST00000349225 KIAA1211Q6ZU35 1233 aa18.12■□□□□ 0.49
RLIM-202ENST00000349225 UPF2Q9HAU5 1272 aaKnown RBP18.12■□□□□ 0.49
RLIM-202ENST00000349225 TMF1P82094 1093 aa18.12■□□□□ 0.49
RLIM-202ENST00000349225 MYO5CQ9NQX4 1742 aa18.12■□□□□ 0.49
RLIM-202ENST00000349225 RIPK4P57078 832 aa18.11■□□□□ 0.49
RLIM-202ENST00000349225 ABCC2Q92887 1545 aa18.1■□□□□ 0.49
RLIM-202ENST00000349225 E9PSI1 815 aa18.1■□□□□ 0.49
RLIM-202ENST00000349225 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
RLIM-202ENST00000349225 PIK3C2GO75747 1445 aa18.09■□□□□ 0.49
RLIM-202ENST00000349225 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
RLIM-202ENST00000349225 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
RLIM-202ENST00000349225 C22orf23Q9BZE7 217 aa18.08■□□□□ 0.49
RLIM-202ENST00000349225 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.49
RLIM-202ENST00000349225 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.49
RLIM-202ENST00000349225 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.48
RLIM-202ENST00000349225 ZMYM3Q14202 1370 aa18.08■□□□□ 0.48
RLIM-202ENST00000349225 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
RLIM-202ENST00000349225 TRIM44Q96DX7 344 aaPredicted RBP18.07■□□□□ 0.48
RLIM-202ENST00000349225 MFAP1P55081 439 aaKnown RBP18.07■□□□□ 0.48
RLIM-202ENST00000349225 SHANK2Q9UPX8 1470 aa18.06■□□□□ 0.48
RLIM-202ENST00000349225 DDX11L8A8MPP1 907 aa18.06■□□□□ 0.48
RLIM-202ENST00000349225 ABCA8O94911 1581 aa18.06■□□□□ 0.48
RLIM-202ENST00000349225 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
RLIM-202ENST00000349225 ISY1Q9ULR0 285 aaKnown RBP18.05■□□□□ 0.48
RLIM-202ENST00000349225 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
RLIM-202ENST00000349225 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
RLIM-202ENST00000349225 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
RLIM-202ENST00000349225 MYOM1P52179 1685 aa18.04■□□□□ 0.48
RLIM-202ENST00000349225 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
RLIM-202ENST00000349225 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
RLIM-202ENST00000349225 RARSP54136 660 aaKnown RBP18.03■□□□□ 0.48
RLIM-202ENST00000349225 WWC1Q8IX03 1113 aa18.03■□□□□ 0.48
RLIM-202ENST00000349225 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
RLIM-202ENST00000349225 PLB1Q6P1J6 1458 aa18.02■□□□□ 0.48
RLIM-202ENST00000349225 OFD1O75665 1012 aa18.02■□□□□ 0.47
RLIM-202ENST00000349225 PPP1R9BQ96SB3 815 aa18.01■□□□□ 0.47
RLIM-202ENST00000349225 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
RLIM-202ENST00000349225 SYNMO15061 1565 aa18■□□□□ 0.47
RLIM-202ENST00000349225 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
RLIM-202ENST00000349225 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.47
RLIM-202ENST00000349225 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
RLIM-202ENST00000349225 RAB3GAP1Q15042 981 aa17.97■□□□□ 0.47
RLIM-202ENST00000349225 HSCBQ8IWL3 235 aa17.97■□□□□ 0.47
RLIM-202ENST00000349225 IQGAP1P46940 1657 aa17.97■□□□□ 0.47
RLIM-202ENST00000349225 CD2BP2O95400 341 aaKnown RBP17.96■□□□□ 0.47
RLIM-202ENST00000349225 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.96■□□□□ 0.47
RLIM-202ENST00000349225 CCDC173Q0VFZ6 552 aa17.95■□□□□ 0.46
RLIM-202ENST00000349225 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
RLIM-202ENST00000349225 FAM13BQ9NYF5 915 aa17.95■□□□□ 0.46
RLIM-202ENST00000349225 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
RLIM-202ENST00000349225 TSPY4P0CV99 314 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms