RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 TXNDC2Q86VQ3 553 aa34.3■■■■□ 3.08
MADCAM1-202ENST00000346144 MED14O60244 1454 aa34.29■■■■□ 3.08
MADCAM1-202ENST00000346144 LTKP29376 864 aa34.29■■■■□ 3.08
MADCAM1-202ENST00000346144 ZNF326Q5BKZ1 582 aaKnown RBP34.28■■■■□ 3.08
MADCAM1-202ENST00000346144 NEXMIFQ5QGS0 1516 aa34.27■■■■□ 3.08
MADCAM1-202ENST00000346144 IQGAP1P46940 1657 aa34.26■■■■□ 3.07
MADCAM1-202ENST00000346144 HDGFP51858 240 aaKnown RBP34.26■■■■□ 3.07
MADCAM1-202ENST00000346144 DMRT2Q9Y5R5 561 aa34.26■■■■□ 3.07
MADCAM1-202ENST00000346144 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.24■■■■□ 3.07
MADCAM1-202ENST00000346144 PPLO60437 1756 aa34.24■■■■□ 3.07
MADCAM1-202ENST00000346144 NPHP4O75161 1426 aaPredicted RBP34.23■■■■□ 3.07
MADCAM1-202ENST00000346144 IFT172Q9UG01 1749 aa34.22■■■■□ 3.07
MADCAM1-202ENST00000346144 RPGRIP1LQ68CZ1 1315 aa34.21■■■■□ 3.07
MADCAM1-202ENST00000346144 PPP1R15AO75807 674 aaPredicted RBP34.18■■■■□ 3.06
MADCAM1-202ENST00000346144 RGL3Q3MIN7 710 aa34.18■■■■□ 3.06
MADCAM1-202ENST00000346144 PLEKHG1Q9ULL1 1385 aa34.17■■■■□ 3.06
MADCAM1-202ENST00000346144 NUTM2DQ5VT03 806 aaPredicted RBP34.15■■■■□ 3.06
MADCAM1-202ENST00000346144 VGFO15240 615 aaPredicted RBP34.09■■■■□ 3.05
MADCAM1-202ENST00000346144 SIN3AQ96ST3 1273 aa34.09■■■■□ 3.05
MADCAM1-202ENST00000346144 SETBP1Q9Y6X0 1596 aa34.08■■■■□ 3.05
MADCAM1-202ENST00000346144 NRXN3Q9Y4C0 1643 aa34.07■■■■□ 3.04
MADCAM1-202ENST00000346144 FBXO41Q8TF61 875 aa34.06■■■■□ 3.04
MADCAM1-202ENST00000346144 MYOM2P54296 1465 aa34.05■■■■□ 3.04
MADCAM1-202ENST00000346144 DIP2AQ14689 1571 aa34.04■■■■□ 3.04
MADCAM1-202ENST00000346144 BCANQ96GW7 911 aa34.04■■■■□ 3.04
MADCAM1-202ENST00000346144 CLSPNQ9HAW4 1339 aa34.02■■■■□ 3.04
MADCAM1-202ENST00000346144 ADAMTS13Q76LX8 1427 aa34.02■■■■□ 3.04
MADCAM1-202ENST00000346144 NEUROD1Q13562 356 aa34.02■■■■□ 3.04
MADCAM1-202ENST00000346144 SLC26A8Q96RN1 970 aa34■■■■□ 3.03
MADCAM1-202ENST00000346144 SENP3Q9H4L4 574 aaPredicted RBP34■■■■□ 3.03
MADCAM1-202ENST00000346144 ADGRF5Q8IZF2 1346 aa33.98■■■■□ 3.03
MADCAM1-202ENST00000346144 NRXN1Q9ULB1 1477 aa33.98■■■■□ 3.03
MADCAM1-202ENST00000346144 STAC3Q96MF2 364 aa33.97■■■■□ 3.03
MADCAM1-202ENST00000346144 CCER1Q8TC90 406 aaPredicted RBP33.96■■■■□ 3.03
MADCAM1-202ENST00000346144 DCAF11Q8TEB1 546 aa33.96■■■■□ 3.03
MADCAM1-202ENST00000346144 TBX22Q9Y458 520 aa33.96■■■■□ 3.03
MADCAM1-202ENST00000346144 PIK3C2GO75747 1445 aa33.95■■■■□ 3.03
MADCAM1-202ENST00000346144 SETD1AO15047 1707 aaKnown RBP33.95■■■■□ 3.02
MADCAM1-202ENST00000346144 ALKQ9UM73 1620 aa33.93■■■■□ 3.02
MADCAM1-202ENST00000346144 ZNF335Q9H4Z2 1342 aaPredicted RBP33.92■■■■□ 3.02
MADCAM1-202ENST00000346144 KDM2AQ9Y2K7 1162 aa33.9■■■■□ 3.02
MADCAM1-202ENST00000346144 STRCP1A6NGW2 1772 aa33.9■■■■□ 3.02
MADCAM1-202ENST00000346144 CHD2O14647 1828 aaKnown RBP33.9■■■■□ 3.02
MADCAM1-202ENST00000346144 LAMC1P11047 1609 aa33.88■■■■□ 3.01
MADCAM1-202ENST00000346144 LTBP4Q8N2S1 1624 aa33.88■■■■□ 3.01
MADCAM1-202ENST00000346144 L3MBTL2Q969R5 705 aa33.88■■■■□ 3.01
MADCAM1-202ENST00000346144 PIK3R4Q99570 1358 aa33.88■■■■□ 3.01
MADCAM1-202ENST00000346144 NWD1Q149M9 1564 aa33.87■■■■□ 3.01
MADCAM1-202ENST00000346144 TONSLQ96HA7 1378 aa33.85■■■■□ 3.01
MADCAM1-202ENST00000346144 CERKQ8TCT0 537 aa33.85■■■■□ 3.01
MADCAM1-202ENST00000346144 CPS1P31327 1500 aa33.83■■■■□ 3.01
MADCAM1-202ENST00000346144 METP08581 1390 aa33.83■■■■□ 3.01
MADCAM1-202ENST00000346144 KCNA6P17658 529 aa33.8■■■■□ 3
MADCAM1-202ENST00000346144 C14orf93Q9H972 538 aaKnown RBP33.79■■■■□ 3
MADCAM1-202ENST00000346144 PRAG1Q86YV5 1406 aa33.78■■■■□ 3
MADCAM1-202ENST00000346144 XRN1Q8IZH2 1706 aaKnown RBP33.78■■■■□ 3
MADCAM1-202ENST00000346144 PTPRUQ92729 1446 aa33.78■■■■□ 3
MADCAM1-202ENST00000346144 NKTRP30414 1462 aaKnown RBP33.77■■■■□ 3
MADCAM1-202ENST00000346144 ASXL1Q8IXJ9 1541 aa33.77■■■■□ 3
MADCAM1-202ENST00000346144 KIAA1210Q9ULL0 1709 aa33.76■■■■□ 3
MADCAM1-202ENST00000346144 CFAP70Q5T0N1 1121 aa33.75■■■□□ 2.99
MADCAM1-202ENST00000346144 AMOTL2Q9Y2J4 779 aa33.71■■■□□ 2.99
MADCAM1-202ENST00000346144 LRRC7Q96NW7 1537 aa33.7■■■□□ 2.99
MADCAM1-202ENST00000346144 TIMELESSQ9UNS1 1208 aa33.7■■■□□ 2.99
MADCAM1-202ENST00000346144 ADGRB1O14514 1584 aa33.69■■■□□ 2.98
MADCAM1-202ENST00000346144 KNDC1Q76NI1 1749 aa33.67■■■□□ 2.98
MADCAM1-202ENST00000346144 TMEM132EQ6IEE7 984 aa33.67■■■□□ 2.98
MADCAM1-202ENST00000346144 TRPM1Q7Z4N2 1603 aa33.67■■■□□ 2.98
MADCAM1-202ENST00000346144 XIRP1Q702N8 1843 aaKnown RBP33.66■■■□□ 2.98
MADCAM1-202ENST00000346144 LRPPRCP42704 1394 aaKnown RBP33.65■■■□□ 2.98
MADCAM1-202ENST00000346144 IQSEC2Q5JU85 1478 aa33.65■■■□□ 2.98
MADCAM1-202ENST00000346144 YTHDC2Q9H6S0 1430 aaKnown RBP33.64■■■□□ 2.98
MADCAM1-202ENST00000346144 PTCH1Q13635 1447 aa33.63■■■□□ 2.97
MADCAM1-202ENST00000346144 PROSER2Q86WR7 435 aaPredicted RBP33.62■■■□□ 2.97
MADCAM1-202ENST00000346144 TECPR2O15040 1411 aa33.62■■■□□ 2.97
MADCAM1-202ENST00000346144 ABCC11Q96J66 1382 aa33.6■■■□□ 2.97
MADCAM1-202ENST00000346144 NBPF8Q3BBV2 869 aa33.59■■■□□ 2.97
MADCAM1-202ENST00000346144 TMEM94Q12767 1356 aa33.59■■■□□ 2.97
MADCAM1-202ENST00000346144 STK26Q9P289 416 aa33.57■■■□□ 2.97
MADCAM1-202ENST00000346144 ROBO2Q9HCK4 1378 aa33.56■■■□□ 2.96
MADCAM1-202ENST00000346144 NCOA3Q9Y6Q9 1424 aa33.55■■■□□ 2.96
MADCAM1-202ENST00000346144 NBPF1Q3BBV0 1214 aa33.54■■■□□ 2.96
MADCAM1-202ENST00000346144 DLC1Q96QB1 1528 aa33.53■■■□□ 2.96
MADCAM1-202ENST00000346144 RALGAPBQ86X10 1494 aa33.52■■■□□ 2.96
MADCAM1-202ENST00000346144 RBM33Q96EV2 1170 aaKnown RBP33.52■■■□□ 2.96
MADCAM1-202ENST00000346144 FAM135BQ49AJ0 1406 aa33.5■■■□□ 2.95
MADCAM1-202ENST00000346144 ROCK2O75116 1388 aaKnown RBP33.49■■■□□ 2.95
MADCAM1-202ENST00000346144 SIRT1Q96EB6 747 aa33.49■■■□□ 2.95
MADCAM1-202ENST00000346144 ARHGEF28Q8N1W1 1705 aaKnown RBP33.49■■■□□ 2.95
MADCAM1-202ENST00000346144 NALCNQ8IZF0 1738 aa33.47■■■□□ 2.95
MADCAM1-202ENST00000346144 GPRASP1Q5JY77 1395 aa33.46■■■□□ 2.95
MADCAM1-202ENST00000346144 TRAK1Q9UPV9 953 aa33.46■■■□□ 2.95
MADCAM1-202ENST00000346144 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.44■■■□□ 2.94
MADCAM1-202ENST00000346144 MSH6P52701 1360 aa33.43■■■□□ 2.94
MADCAM1-202ENST00000346144 ADGRL3Q9HAR2 1447 aa33.42■■■□□ 2.94
MADCAM1-202ENST00000346144 WAPLQ7Z5K2 1190 aa33.42■■■□□ 2.94
MADCAM1-202ENST00000346144 C14orf37Q86TY3 774 aa33.42■■■□□ 2.94
MADCAM1-202ENST00000346144 PLEKHH1Q9ULM0 1364 aa33.42■■■□□ 2.94
MADCAM1-202ENST00000346144 PRAM1Q96QH2 718 aa33.4■■■□□ 2.94
MADCAM1-202ENST00000346144 C19orf44Q9H6X5 657 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms