RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MYOM2P54296 1465 aa18.89■□□□□ 0.62
CDC42-202ENST00000344548 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
CDC42-202ENST00000344548 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
CDC42-202ENST00000344548 NRXN1Q9ULB1 1477 aa18.87■□□□□ 0.61
CDC42-202ENST00000344548 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
CDC42-202ENST00000344548 PPLO60437 1756 aa18.86■□□□□ 0.61
CDC42-202ENST00000344548 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
CDC42-202ENST00000344548 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
CDC42-202ENST00000344548 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
CDC42-202ENST00000344548 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
CDC42-202ENST00000344548 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
CDC42-202ENST00000344548 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
CDC42-202ENST00000344548 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
CDC42-202ENST00000344548 NEXMIFQ5QGS0 1516 aa18.82■□□□□ 0.6
CDC42-202ENST00000344548 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
CDC42-202ENST00000344548 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
CDC42-202ENST00000344548 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
CDC42-202ENST00000344548 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
CDC42-202ENST00000344548 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
CDC42-202ENST00000344548 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
CDC42-202ENST00000344548 TMEM131LA2VDJ0 1609 aa18.81■□□□□ 0.6
CDC42-202ENST00000344548 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
CDC42-202ENST00000344548 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
CDC42-202ENST00000344548 ZMYM3Q14202 1370 aa18.8■□□□□ 0.6
CDC42-202ENST00000344548 RPGRIP1LQ68CZ1 1315 aa18.79■□□□□ 0.6
CDC42-202ENST00000344548 CENPBP07199 599 aaPredicted RBP18.79■□□□□ 0.6
CDC42-202ENST00000344548 C14orf93Q9H972 538 aaKnown RBP18.79■□□□□ 0.6
CDC42-202ENST00000344548 SPATA31D1Q6ZQQ2 1576 aa18.77■□□□□ 0.6
CDC42-202ENST00000344548 ADGRB1O14514 1584 aa18.75■□□□□ 0.59
CDC42-202ENST00000344548 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
CDC42-202ENST00000344548 TMF1P82094 1093 aa18.74■□□□□ 0.59
CDC42-202ENST00000344548 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
CDC42-202ENST00000344548 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
CDC42-202ENST00000344548 CEBPAP49715 358 aaPredicted RBP18.72■□□□□ 0.59
CDC42-202ENST00000344548 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
CDC42-202ENST00000344548 STAG3Q9UJ98 1225 aa18.71■□□□□ 0.59
CDC42-202ENST00000344548 SETBP1Q9Y6X0 1596 aa18.71■□□□□ 0.59
CDC42-202ENST00000344548 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
CDC42-202ENST00000344548 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
CDC42-202ENST00000344548 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
CDC42-202ENST00000344548 ASXL1Q8IXJ9 1541 aa18.67■□□□□ 0.58
CDC42-202ENST00000344548 PANK3Q9H999 370 aa18.67■□□□□ 0.58
CDC42-202ENST00000344548 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
CDC42-202ENST00000344548 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
CDC42-202ENST00000344548 TNRQ92752 1358 aa18.64■□□□□ 0.57
CDC42-202ENST00000344548 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
CDC42-202ENST00000344548 MYO3AQ8NEV4 1616 aa18.64■□□□□ 0.57
CDC42-202ENST00000344548 STK26Q9P289 416 aa18.63■□□□□ 0.57
CDC42-202ENST00000344548 RIMS2Q9UQ26 1411 aa18.62■□□□□ 0.57
CDC42-202ENST00000344548 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
CDC42-202ENST00000344548 MYOM1P52179 1685 aa18.6■□□□□ 0.57
CDC42-202ENST00000344548 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
CDC42-202ENST00000344548 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDC42-202ENST00000344548 PTPRMP28827 1452 aa18.59■□□□□ 0.57
CDC42-202ENST00000344548 C3P01024 1663 aa18.59■□□□□ 0.57
CDC42-202ENST00000344548 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
CDC42-202ENST00000344548 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
CDC42-202ENST00000344548 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.57
CDC42-202ENST00000344548 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
CDC42-202ENST00000344548 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
CDC42-202ENST00000344548 FER1L4A9Z1Z3 1794 aa18.57■□□□□ 0.56
CDC42-202ENST00000344548 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
CDC42-202ENST00000344548 CDCA8Q53HL2 280 aa18.56■□□□□ 0.56
CDC42-202ENST00000344548 UBR1Q8IWV7 1749 aa18.56■□□□□ 0.56
CDC42-202ENST00000344548 KDM5AP29375 1690 aaKnown RBP18.56■□□□□ 0.56
CDC42-202ENST00000344548 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
CDC42-202ENST00000344548 NRXN3Q9Y4C0 1643 aa18.54■□□□□ 0.56
CDC42-202ENST00000344548 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
CDC42-202ENST00000344548 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
CDC42-202ENST00000344548 CARD14Q9BXL6 1004 aa18.53■□□□□ 0.56
CDC42-202ENST00000344548 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
CDC42-202ENST00000344548 LTKP29376 864 aa18.52■□□□□ 0.56
CDC42-202ENST00000344548 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.56
CDC42-202ENST00000344548 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
CDC42-202ENST00000344548 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.56
CDC42-202ENST00000344548 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.55
CDC42-202ENST00000344548 RALBP1Q15311 655 aa18.52■□□□□ 0.55
CDC42-202ENST00000344548 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.55
CDC42-202ENST00000344548 SLC12A5Q9H2X9 1139 aa18.51■□□□□ 0.55
CDC42-202ENST00000344548 METP08581 1390 aa18.51■□□□□ 0.55
CDC42-202ENST00000344548 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
CDC42-202ENST00000344548 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
CDC42-202ENST00000344548 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
CDC42-202ENST00000344548 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
CDC42-202ENST00000344548 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
CDC42-202ENST00000344548 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
CDC42-202ENST00000344548 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDC42-202ENST00000344548 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
CDC42-202ENST00000344548 NLRP1Q9C000 1473 aa18.48■□□□□ 0.55
CDC42-202ENST00000344548 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
CDC42-202ENST00000344548 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
CDC42-202ENST00000344548 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
CDC42-202ENST00000344548 POGKQ9P215 609 aa18.46■□□□□ 0.54
CDC42-202ENST00000344548 RIMS1Q86UR5 1692 aaKnown RBP18.45■□□□□ 0.54
CDC42-202ENST00000344548 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
CDC42-202ENST00000344548 BCANQ96GW7 911 aa18.44■□□□□ 0.54
CDC42-202ENST00000344548 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
CDC42-202ENST00000344548 TXNDC2Q86VQ3 553 aa18.44■□□□□ 0.54
CDC42-202ENST00000344548 BRD4O60885 1362 aaPredicted RBP18.44■□□□□ 0.54
CDC42-202ENST00000344548 ADAMTS13Q76LX8 1427 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms