RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 KIF7Q2M1P5 1343 aa19.22■□□□□ 0.67
ATF3-202ENST00000341491 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
ATF3-202ENST00000341491 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
ATF3-202ENST00000341491 CFAP70Q5T0N1 1121 aa19.19■□□□□ 0.66
ATF3-202ENST00000341491 TMEM131LA2VDJ0 1609 aa19.17■□□□□ 0.66
ATF3-202ENST00000341491 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
ATF3-202ENST00000341491 NEURL4Q96JN8 1562 aa19.16■□□□□ 0.66
ATF3-202ENST00000341491 NEXMIFQ5QGS0 1516 aa19.16■□□□□ 0.66
ATF3-202ENST00000341491 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
ATF3-202ENST00000341491 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
ATF3-202ENST00000341491 CEBPAP49715 358 aaPredicted RBP19.15■□□□□ 0.66
ATF3-202ENST00000341491 ESF1Q9H501 851 aaKnown RBP19.15■□□□□ 0.66
ATF3-202ENST00000341491 LAMC1P11047 1609 aa19.15■□□□□ 0.66
ATF3-202ENST00000341491 MYOM2P54296 1465 aa19.15■□□□□ 0.66
ATF3-202ENST00000341491 ZMYM3Q14202 1370 aa19.14■□□□□ 0.65
ATF3-202ENST00000341491 FER1L4A9Z1Z3 1794 aa19.14■□□□□ 0.65
ATF3-202ENST00000341491 SPATA31D1Q6ZQQ2 1576 aa19.13■□□□□ 0.65
ATF3-202ENST00000341491 TMEM132EQ6IEE7 984 aa19.1■□□□□ 0.65
ATF3-202ENST00000341491 KIAA1210Q9ULL0 1709 aa19.1■□□□□ 0.65
ATF3-202ENST00000341491 NRXN1Q9ULB1 1477 aa19.1■□□□□ 0.65
ATF3-202ENST00000341491 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
ATF3-202ENST00000341491 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
ATF3-202ENST00000341491 PIK3C2GO75747 1445 aa19.09■□□□□ 0.65
ATF3-202ENST00000341491 C3P01024 1663 aa19.08■□□□□ 0.65
ATF3-202ENST00000341491 SLC52A1Q9NWF4 448 aa19.08■□□□□ 0.64
ATF3-202ENST00000341491 TESK2Q96S53 571 aa19.07■□□□□ 0.64
ATF3-202ENST00000341491 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
ATF3-202ENST00000341491 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
ATF3-202ENST00000341491 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
ATF3-202ENST00000341491 ANP32CO43423 234 aa19.03■□□□□ 0.64
ATF3-202ENST00000341491 TRAK1Q9UPV9 953 aa19.03■□□□□ 0.64
ATF3-202ENST00000341491 RIMS1Q86UR5 1692 aaKnown RBP19.03■□□□□ 0.64
ATF3-202ENST00000341491 TNRQ92752 1358 aa19.02■□□□□ 0.64
ATF3-202ENST00000341491 ADGRB1O14514 1584 aa19.02■□□□□ 0.63
ATF3-202ENST00000341491 ASXL1Q8IXJ9 1541 aa19.01■□□□□ 0.63
ATF3-202ENST00000341491 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
ATF3-202ENST00000341491 UBR1Q8IWV7 1749 aa18.99■□□□□ 0.63
ATF3-202ENST00000341491 C14orf93Q9H972 538 aaKnown RBP18.99■□□□□ 0.63
ATF3-202ENST00000341491 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
ATF3-202ENST00000341491 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
ATF3-202ENST00000341491 STK26Q9P289 416 aa18.98■□□□□ 0.63
ATF3-202ENST00000341491 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
ATF3-202ENST00000341491 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
ATF3-202ENST00000341491 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
ATF3-202ENST00000341491 ARHGEF28Q8N1W1 1705 aaKnown RBP18.97■□□□□ 0.63
ATF3-202ENST00000341491 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
ATF3-202ENST00000341491 CCDC184Q52MB2 194 aa18.95■□□□□ 0.62
ATF3-202ENST00000341491 ALKQ9UM73 1620 aa18.94■□□□□ 0.62
ATF3-202ENST00000341491 TMF1P82094 1093 aa18.93■□□□□ 0.62
ATF3-202ENST00000341491 MYOM1P52179 1685 aa18.93■□□□□ 0.62
ATF3-202ENST00000341491 MYO3AQ8NEV4 1616 aa18.93■□□□□ 0.62
ATF3-202ENST00000341491 NRXN3Q9Y4C0 1643 aa18.93■□□□□ 0.62
ATF3-202ENST00000341491 PTPRMP28827 1452 aa18.92■□□□□ 0.62
ATF3-202ENST00000341491 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
ATF3-202ENST00000341491 SETD1AO15047 1707 aaKnown RBP18.92■□□□□ 0.62
ATF3-202ENST00000341491 ZFYVE9O95405 1425 aa18.92■□□□□ 0.62
ATF3-202ENST00000341491 KDM5AP29375 1690 aaKnown RBP18.9■□□□□ 0.62
ATF3-202ENST00000341491 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
ATF3-202ENST00000341491 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
ATF3-202ENST00000341491 ADAMTSL3P82987 1691 aa18.88■□□□□ 0.61
ATF3-202ENST00000341491 BCANQ96GW7 911 aa18.87■□□□□ 0.61
ATF3-202ENST00000341491 PANK3Q9H999 370 aa18.86■□□□□ 0.61
ATF3-202ENST00000341491 LTKP29376 864 aa18.85■□□□□ 0.61
ATF3-202ENST00000341491 TMEM2Q9UHN6 1383 aa18.85■□□□□ 0.61
ATF3-202ENST00000341491 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
ATF3-202ENST00000341491 NLRP1Q9C000 1473 aa18.83■□□□□ 0.61
ATF3-202ENST00000341491 METP08581 1390 aa18.83■□□□□ 0.6
ATF3-202ENST00000341491 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
ATF3-202ENST00000341491 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
ATF3-202ENST00000341491 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
ATF3-202ENST00000341491 PRAM1Q96QH2 718 aa18.82■□□□□ 0.6
ATF3-202ENST00000341491 MINK1Q8N4C8 1332 aaPredicted RBP18.82■□□□□ 0.6
ATF3-202ENST00000341491 PLEKHH1Q9ULM0 1364 aa18.81■□□□□ 0.6
ATF3-202ENST00000341491 WAPLQ7Z5K2 1190 aa18.8■□□□□ 0.6
ATF3-202ENST00000341491 CENPBP07199 599 aaPredicted RBP18.79■□□□□ 0.6
ATF3-202ENST00000341491 CEP170BQ9Y4F5 1589 aaPredicted RBP18.79■□□□□ 0.6
ATF3-202ENST00000341491 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
ATF3-202ENST00000341491 TXNDC2Q86VQ3 553 aa18.78■□□□□ 0.6
ATF3-202ENST00000341491 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
ATF3-202ENST00000341491 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
ATF3-202ENST00000341491 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
ATF3-202ENST00000341491 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
ATF3-202ENST00000341491 POGKQ9P215 609 aa18.76■□□□□ 0.59
ATF3-202ENST00000341491 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.59
ATF3-202ENST00000341491 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
ATF3-202ENST00000341491 ADAMTS13Q76LX8 1427 aa18.75■□□□□ 0.59
ATF3-202ENST00000341491 SBNO2Q9Y2G9 1366 aa18.75■□□□□ 0.59
ATF3-202ENST00000341491 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
ATF3-202ENST00000341491 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
ATF3-202ENST00000341491 SLIT1O75093 1534 aa18.72■□□□□ 0.59
ATF3-202ENST00000341491 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
ATF3-202ENST00000341491 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
ATF3-202ENST00000341491 LRPPRCP42704 1394 aaKnown RBP18.71■□□□□ 0.59
ATF3-202ENST00000341491 CARD14Q9BXL6 1004 aa18.71■□□□□ 0.59
ATF3-202ENST00000341491 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
ATF3-202ENST00000341491 PLEKHG1Q9ULL1 1385 aa18.7■□□□□ 0.58
ATF3-202ENST00000341491 SRPK2P78362 688 aaKnown RBP18.7■□□□□ 0.58
ATF3-202ENST00000341491 ZNF142P52746 1687 aaPredicted RBP18.7■□□□□ 0.58
ATF3-202ENST00000341491 EID1Q9Y6B2 187 aa18.69■□□□□ 0.58
ATF3-202ENST00000341491 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms