RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 CPS1P31327 1500 aa33.5■■■□□ 2.95
PBX1-201ENST00000340699 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.5■■■□□ 2.95
PBX1-201ENST00000340699 ZFYVE9O95405 1425 aa33.48■■■□□ 2.95
PBX1-201ENST00000340699 TRPM2O94759 1503 aa33.48■■■□□ 2.95
PBX1-201ENST00000340699 MPHOSPH9Q99550 1183 aa33.45■■■□□ 2.95
PBX1-201ENST00000340699 ZNF326Q5BKZ1 582 aaKnown RBP33.43■■■□□ 2.94
PBX1-201ENST00000340699 SLC26A8Q96RN1 970 aa33.42■■■□□ 2.94
PBX1-201ENST00000340699 CLTCL1P53675 1640 aa33.42■■■□□ 2.94
PBX1-201ENST00000340699 RAB3GAP2Q9H2M9 1393 aa33.41■■■□□ 2.94
PBX1-201ENST00000340699 PLEKHG1Q9ULL1 1385 aa33.41■■■□□ 2.94
PBX1-201ENST00000340699 NUTM2DQ5VT03 806 aaPredicted RBP33.4■■■□□ 2.94
PBX1-201ENST00000340699 FOXD1Q16676 465 aa33.39■■■□□ 2.94
PBX1-201ENST00000340699 SENP3Q9H4L4 574 aaPredicted RBP33.39■■■□□ 2.94
PBX1-201ENST00000340699 KIF1BO60333 1816 aa33.37■■■□□ 2.93
PBX1-201ENST00000340699 STRCP1A6NGW2 1772 aa33.35■■■□□ 2.93
PBX1-201ENST00000340699 UBAP1LF5GYI3 381 aa33.33■■■□□ 2.93
PBX1-201ENST00000340699 KCNA6P17658 529 aa33.31■■■□□ 2.92
PBX1-201ENST00000340699 TBX22Q9Y458 520 aa33.29■■■□□ 2.92
PBX1-201ENST00000340699 LRRC7Q96NW7 1537 aa33.28■■■□□ 2.92
PBX1-201ENST00000340699 HRCP23327 699 aa33.28■■■□□ 2.92
PBX1-201ENST00000340699 CCDC144AA2RUR9 1427 aa33.27■■■□□ 2.92
PBX1-201ENST00000340699 TOM1O60784 492 aa33.25■■■□□ 2.91
PBX1-201ENST00000340699 DIP2AQ14689 1571 aa33.21■■■□□ 2.91
PBX1-201ENST00000340699 ADAMTS13Q76LX8 1427 aa33.21■■■□□ 2.91
PBX1-201ENST00000340699 NEXMIFQ5QGS0 1516 aa33.21■■■□□ 2.91
PBX1-201ENST00000340699 RPGRIP1LQ68CZ1 1315 aa33.21■■■□□ 2.91
PBX1-201ENST00000340699 PROSER2Q86WR7 435 aaPredicted RBP33.2■■■□□ 2.91
PBX1-201ENST00000340699 VGFO15240 615 aaPredicted RBP33.19■■■□□ 2.9
PBX1-201ENST00000340699 NWD1Q149M9 1564 aa33.17■■■□□ 2.9
PBX1-201ENST00000340699 CHD2O14647 1828 aaKnown RBP33.16■■■□□ 2.9
PBX1-201ENST00000340699 PIK3R4Q99570 1358 aa33.16■■■□□ 2.9
PBX1-201ENST00000340699 NKTRP30414 1462 aaKnown RBP33.15■■■□□ 2.9
PBX1-201ENST00000340699 SCAF1Q9H7N4 1312 aaKnown RBP33.15■■■□□ 2.9
PBX1-201ENST00000340699 SETBP1Q9Y6X0 1596 aa33.14■■■□□ 2.9
PBX1-201ENST00000340699 TMEM94Q12767 1356 aa33.13■■■□□ 2.89
PBX1-201ENST00000340699 PIP4K2BP78356 416 aa33.13■■■□□ 2.89
PBX1-201ENST00000340699 RGL3Q3MIN7 710 aa33.13■■■□□ 2.89
PBX1-201ENST00000340699 NRXN3Q9Y4C0 1643 aa33.1■■■□□ 2.89
PBX1-201ENST00000340699 XIRP1Q702N8 1843 aaKnown RBP33.09■■■□□ 2.89
PBX1-201ENST00000340699 RBM33Q96EV2 1170 aaKnown RBP33.08■■■□□ 2.89
PBX1-201ENST00000340699 PPLO60437 1756 aa33.07■■■□□ 2.88
PBX1-201ENST00000340699 AMOTL2Q9Y2J4 779 aa33.07■■■□□ 2.88
PBX1-201ENST00000340699 SPATA31E1Q6ZUB1 1445 aa33.07■■■□□ 2.88
PBX1-201ENST00000340699 METP08581 1390 aa33.01■■■□□ 2.88
PBX1-201ENST00000340699 ANKRD30BQ9BXX2 1392 aa33.01■■■□□ 2.88
PBX1-201ENST00000340699 PTPRUQ92729 1446 aa33.01■■■□□ 2.87
PBX1-201ENST00000340699 ALKQ9UM73 1620 aa32.99■■■□□ 2.87
PBX1-201ENST00000340699 MSH6P52701 1360 aa32.99■■■□□ 2.87
PBX1-201ENST00000340699 C14orf37Q86TY3 774 aa32.99■■■□□ 2.87
PBX1-201ENST00000340699 NCOA3Q9Y6Q9 1424 aa32.97■■■□□ 2.87
PBX1-201ENST00000340699 ADGRF5Q8IZF2 1346 aa32.96■■■□□ 2.87
PBX1-201ENST00000340699 IFT172Q9UG01 1749 aa32.94■■■□□ 2.86
PBX1-201ENST00000340699 XRN1Q8IZH2 1706 aaKnown RBP32.92■■■□□ 2.86
PBX1-201ENST00000340699 HSPA1LP34931 641 aa32.9■■■□□ 2.86
PBX1-201ENST00000340699 TRIM26Q12899 539 aaPredicted RBP32.88■■■□□ 2.85
PBX1-201ENST00000340699 C19orf44Q9H6X5 657 aa32.88■■■□□ 2.85
PBX1-201ENST00000340699 SETD1AO15047 1707 aaKnown RBP32.88■■■□□ 2.85
PBX1-201ENST00000340699 ATF3P18847 181 aa32.84■■■□□ 2.85
PBX1-201ENST00000340699 CADPS2Q86UW7 1296 aa32.83■■■□□ 2.85
PBX1-201ENST00000340699 SLAIN2Q9P270 581 aa32.83■■■□□ 2.85
PBX1-201ENST00000340699 PIK3C2GO75747 1445 aa32.82■■■□□ 2.84
PBX1-201ENST00000340699 FAM135BQ49AJ0 1406 aa32.82■■■□□ 2.84
PBX1-201ENST00000340699 MYOM2P54296 1465 aa32.8■■■□□ 2.84
PBX1-201ENST00000340699 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.8■■■□□ 2.84
PBX1-201ENST00000340699 DCAF11Q8TEB1 546 aa32.77■■■□□ 2.84
PBX1-201ENST00000340699 PTCH1Q13635 1447 aa32.77■■■□□ 2.84
PBX1-201ENST00000340699 STAC3Q96MF2 364 aa32.76■■■□□ 2.83
PBX1-201ENST00000340699 KDM2AQ9Y2K7 1162 aa32.76■■■□□ 2.83
PBX1-201ENST00000340699 NRXN1Q9ULB1 1477 aa32.75■■■□□ 2.83
PBX1-201ENST00000340699 C14orf93Q9H972 538 aaKnown RBP32.75■■■□□ 2.83
PBX1-201ENST00000340699 TMEM132EQ6IEE7 984 aa32.74■■■□□ 2.83
PBX1-201ENST00000340699 ROBO1Q9Y6N7 1651 aa32.74■■■□□ 2.83
PBX1-201ENST00000340699 ROBO2Q9HCK4 1378 aa32.73■■■□□ 2.83
PBX1-201ENST00000340699 STK26Q9P289 416 aa32.73■■■□□ 2.83
PBX1-201ENST00000340699 DCCP43146 1447 aa32.73■■■□□ 2.83
PBX1-201ENST00000340699 PRAG1Q86YV5 1406 aa32.72■■■□□ 2.83
PBX1-201ENST00000340699 ADGRL3Q9HAR2 1447 aa32.71■■■□□ 2.83
PBX1-201ENST00000340699 CFAP70Q5T0N1 1121 aa32.71■■■□□ 2.83
PBX1-201ENST00000340699 LRPPRCP42704 1394 aaKnown RBP32.7■■■□□ 2.82
PBX1-201ENST00000340699 LAMC1P11047 1609 aa32.69■■■□□ 2.82
PBX1-201ENST00000340699 DHX57Q6P158 1386 aaKnown RBP32.66■■■□□ 2.82
PBX1-201ENST00000340699 ABCC11Q96J66 1382 aa32.66■■■□□ 2.82
PBX1-201ENST00000340699 NALCNQ8IZF0 1738 aa32.65■■■□□ 2.82
PBX1-201ENST00000340699 YTHDC2Q9H6S0 1430 aaKnown RBP32.65■■■□□ 2.82
PBX1-201ENST00000340699 ASXL1Q8IXJ9 1541 aa32.65■■■□□ 2.82
PBX1-201ENST00000340699 TECPR2O15040 1411 aa32.63■■■□□ 2.81
PBX1-201ENST00000340699 KNDC1Q76NI1 1749 aa32.6■■■□□ 2.81
PBX1-201ENST00000340699 DISP3Q9P2K9 1392 aa32.59■■■□□ 2.81
PBX1-201ENST00000340699 WAPLQ7Z5K2 1190 aa32.59■■■□□ 2.81
PBX1-201ENST00000340699 MST1RQ04912 1400 aa32.59■■■□□ 2.81
PBX1-201ENST00000340699 SIRT1Q96EB6 747 aa32.58■■■□□ 2.81
PBX1-201ENST00000340699 BRINP3Q76B58 766 aa32.56■■■□□ 2.8
PBX1-201ENST00000340699 PHLPP1O60346 1717 aa32.56■■■□□ 2.8
PBX1-201ENST00000340699 SIN3AQ96ST3 1273 aa32.55■■■□□ 2.8
PBX1-201ENST00000340699 NEUROD1Q13562 356 aa32.53■■■□□ 2.8
PBX1-201ENST00000340699 PLEKHH1Q9ULM0 1364 aa32.51■■■□□ 2.79
PBX1-201ENST00000340699 C1orf167Q5SNV9 1468 aa32.49■■■□□ 2.79
PBX1-201ENST00000340699 POGKQ9P215 609 aa32.49■■■□□ 2.79
PBX1-201ENST00000340699 ADGRB1O14514 1584 aa32.49■■■□□ 2.79
PBX1-201ENST00000340699 TRAK1Q9UPV9 953 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms