RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
CDK11B-201ENST00000340677 TRIM52Q96A61 297 aa22.32■■□□□ 1.16
CDK11B-201ENST00000340677 ERBINQ96RT1 1412 aa22.32■■□□□ 1.16
CDK11B-201ENST00000340677 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
CDK11B-201ENST00000340677 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
CDK11B-201ENST00000340677 ZHX1Q9UKY1 873 aaPredicted RBP22.29■■□□□ 1.16
CDK11B-201ENST00000340677 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
CDK11B-201ENST00000340677 ATP7AQ04656 1500 aa22.28■■□□□ 1.16
CDK11B-201ENST00000340677 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
CDK11B-201ENST00000340677 SCAPERQ9BY12 1400 aa22.28■■□□□ 1.16
CDK11B-201ENST00000340677 KDM5CP41229 1560 aa22.27■■□□□ 1.16
CDK11B-201ENST00000340677 ZNF518AQ6AHZ1 1483 aa22.27■■□□□ 1.16
CDK11B-201ENST00000340677 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.15
CDK11B-201ENST00000340677 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
CDK11B-201ENST00000340677 EIF2AK4Q9P2K8 1649 aaKnown RBP22.25■■□□□ 1.15
CDK11B-201ENST00000340677 TMED8Q6PL24 325 aaPredicted RBP22.24■■□□□ 1.15
CDK11B-201ENST00000340677 IQGAP3Q86VI3 1631 aa22.24■■□□□ 1.15
CDK11B-201ENST00000340677 DDRGK1Q96HY6 314 aa22.23■■□□□ 1.15
CDK11B-201ENST00000340677 ANKRD30BQ9BXX2 1392 aa22.23■■□□□ 1.15
CDK11B-201ENST00000340677 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
CDK11B-201ENST00000340677 IGSF3O75054 1194 aa22.22■■□□□ 1.15
CDK11B-201ENST00000340677 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
CDK11B-201ENST00000340677 KCNA4P22459 653 aa22.21■■□□□ 1.15
CDK11B-201ENST00000340677 SIN3AQ96ST3 1273 aa22.21■■□□□ 1.15
CDK11B-201ENST00000340677 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
CDK11B-201ENST00000340677 SLC4A1APQ9BWU0 796 aaKnown RBP22.21■■□□□ 1.15
CDK11B-201ENST00000340677 CFAP44Q96MT7 982 aa22.2■■□□□ 1.14
CDK11B-201ENST00000340677 MLH3Q9UHC1 1453 aa22.2■■□□□ 1.14
CDK11B-201ENST00000340677 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
CDK11B-201ENST00000340677 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
CDK11B-201ENST00000340677 CCDC9Q9Y3X0 531 aaKnown RBP22.19■■□□□ 1.14
CDK11B-201ENST00000340677 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
CDK11B-201ENST00000340677 NUP155O75694 1391 aa22.18■■□□□ 1.14
CDK11B-201ENST00000340677 HECW2Q9P2P5 1572 aa22.18■■□□□ 1.14
CDK11B-201ENST00000340677 RPRD2Q5VT52 1461 aaKnown RBP22.17■■□□□ 1.14
CDK11B-201ENST00000340677 SMAP1Q8IYB5 467 aaPredicted RBP22.17■■□□□ 1.14
CDK11B-201ENST00000340677 RICTORQ6R327 1708 aa22.17■■□□□ 1.14
CDK11B-201ENST00000340677 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
CDK11B-201ENST00000340677 TONSLQ96HA7 1378 aa22.16■■□□□ 1.14
CDK11B-201ENST00000340677 BCORL1Q5H9F3 1711 aa22.16■■□□□ 1.14
CDK11B-201ENST00000340677 PPRC1Q5VV67 1664 aaKnown RBP22.15■■□□□ 1.14
CDK11B-201ENST00000340677 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.15■■□□□ 1.14
CDK11B-201ENST00000340677 TICAM2Q86XR7 235 aa22.14■■□□□ 1.14
CDK11B-201ENST00000340677 IRX3P78415 501 aaPredicted RBP22.13■■□□□ 1.13
CDK11B-201ENST00000340677 TEX14Q8IWB6 1497 aa22.13■■□□□ 1.13
CDK11B-201ENST00000340677 VGFO15240 615 aaPredicted RBP22.13■■□□□ 1.13
CDK11B-201ENST00000340677 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
CDK11B-201ENST00000340677 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
CDK11B-201ENST00000340677 SLC52A1Q9NWF4 448 aa22.11■■□□□ 1.13
CDK11B-201ENST00000340677 VWDEQ8N2E2 1590 aa22.1■■□□□ 1.13
CDK11B-201ENST00000340677 PPP4R3BQ5MIZ7 849 aa22.1■■□□□ 1.13
CDK11B-201ENST00000340677 CLCN1P35523 988 aa22.1■■□□□ 1.13
CDK11B-201ENST00000340677 RNF17Q9BXT8 1623 aaKnown RBP22.09■■□□□ 1.13
CDK11B-201ENST00000340677 FAM193AP78312 1265 aa22.09■■□□□ 1.13
CDK11B-201ENST00000340677 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
CDK11B-201ENST00000340677 PKD2Q13563 968 aa22.09■■□□□ 1.13
CDK11B-201ENST00000340677 ZMYM4Q5VZL5 1548 aa22.08■■□□□ 1.13
CDK11B-201ENST00000340677 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
CDK11B-201ENST00000340677 FAM43BQ6ZT52 329 aaPredicted RBP22.08■■□□□ 1.12
CDK11B-201ENST00000340677 TET3O43151 1660 aa22.06■■□□□ 1.12
CDK11B-201ENST00000340677 ATP10AO60312 1499 aa22.06■■□□□ 1.12
CDK11B-201ENST00000340677 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
CDK11B-201ENST00000340677 ABCA6Q8N139 1617 aa22.06■■□□□ 1.12
CDK11B-201ENST00000340677 GRIPAP1Q4V328 841 aa22.05■■□□□ 1.12
CDK11B-201ENST00000340677 A2MP01023 1474 aa22.05■■□□□ 1.12
CDK11B-201ENST00000340677 FRMPD1Q5SYB0 1578 aa22.05■■□□□ 1.12
CDK11B-201ENST00000340677 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
CDK11B-201ENST00000340677 MROH1Q8NDA8 1641 aa22.04■■□□□ 1.12
CDK11B-201ENST00000340677 PATL2C9JE40 543 aaKnown RBP22.04■■□□□ 1.12
CDK11B-201ENST00000340677 TSPOAP1O95153 1857 aa22.04■■□□□ 1.12
CDK11B-201ENST00000340677 MMP14P50281 582 aa22.03■■□□□ 1.12
CDK11B-201ENST00000340677 UTP14CQ5TAP6 766 aaKnown RBP22.03■■□□□ 1.12
CDK11B-201ENST00000340677 HDAC5Q9UQL6 1122 aa22.02■■□□□ 1.12
CDK11B-201ENST00000340677 DIP2CQ9Y2E4 1556 aa22.02■■□□□ 1.11
CDK11B-201ENST00000340677 MYCNP04198 464 aaPredicted RBP22.01■■□□□ 1.11
CDK11B-201ENST00000340677 TPM2P07951 284 aa22■■□□□ 1.11
CDK11B-201ENST00000340677 ZNF592Q92610 1267 aa22■■□□□ 1.11
CDK11B-201ENST00000340677 ANP32BQ92688 251 aaKnown RBP22■■□□□ 1.11
CDK11B-201ENST00000340677 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
CDK11B-201ENST00000340677 E9PCH4 1651 aa21.99■■□□□ 1.11
CDK11B-201ENST00000340677 CLGNO14967 610 aa21.99■■□□□ 1.11
CDK11B-201ENST00000340677 KANK1Q14678 1352 aa21.99■■□□□ 1.11
CDK11B-201ENST00000340677 TMEM132AQ24JP5 1023 aa21.98■■□□□ 1.11
CDK11B-201ENST00000340677 REREQ9P2R6 1566 aa21.97■■□□□ 1.11
CDK11B-201ENST00000340677 DMTNQ08495 405 aa21.96■■□□□ 1.11
CDK11B-201ENST00000340677 SPHKAPQ2M3C7 1700 aa21.95■■□□□ 1.1
CDK11B-201ENST00000340677 NFKBIBQ15653 356 aa21.95■■□□□ 1.1
CDK11B-201ENST00000340677 E9PSI1 815 aa21.94■■□□□ 1.1
CDK11B-201ENST00000340677 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
CDK11B-201ENST00000340677 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
CDK11B-201ENST00000340677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.19e-7■■■■□ 20.5
CDK11B-201ENST00000340677 TRPM2O94759 1503 aa21.91■■□□□ 1.1
CDK11B-201ENST00000340677 PTMAP06454 111 aaKnown RBP21.91■■□□□ 1.1
CDK11B-201ENST00000340677 PSEN1P49768 467 aa21.91■■□□□ 1.1
CDK11B-201ENST00000340677 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
CDK11B-201ENST00000340677 PTPRTO14522 1441 aa21.91■■□□□ 1.1
CDK11B-201ENST00000340677 ZC3H13Q5T200 1668 aaKnown RBP21.91■■□□□ 1.1
CDK11B-201ENST00000340677 KIF3BO15066 747 aa21.9■■□□□ 1.1
CDK11B-201ENST00000340677 CCDC144AA2RUR9 1427 aa21.9■■□□□ 1.1
CDK11B-201ENST00000340677 RAPGEF3O95398 923 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms