RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 TTC16Q8NEE8 873 aa9.01□□□□□ -0.97
ABCA9-201ENST00000340001 PODXL2Q9NZ53 605 aa9.01□□□□□ -0.97
ABCA9-201ENST00000340001 SMARCA2P51531 1590 aa9.01□□□□□ -0.97
ABCA9-201ENST00000340001 AKAP17AQ02040 695 aaKnown RBP9.01□□□□□ -0.97
ABCA9-201ENST00000340001 MCTP1Q6DN14 999 aa9.01□□□□□ -0.97
ABCA9-201ENST00000340001 RBM42Q9BTD8 480 aaKnown RBP9.01□□□□□ -0.97
ABCA9-201ENST00000340001 ATF3P18847 181 aa9.01□□□□□ -0.97
ABCA9-201ENST00000340001 SF3A1Q15459 793 aaKnown RBP9.01□□□□□ -0.97
ABCA9-201ENST00000340001 CCDC97Q96F63 343 aaPredicted RBP9.01□□□□□ -0.97
ABCA9-201ENST00000340001 CENPJQ9HC77 1338 aaPredicted RBP9.01□□□□□ -0.97
ABCA9-201ENST00000340001 CA8P35219 290 aa9□□□□□ -0.97
ABCA9-201ENST00000340001 CARMIL2Q6F5E8 1435 aa9□□□□□ -0.97
ABCA9-201ENST00000340001 AMOTL1Q8IY63 956 aa9□□□□□ -0.97
ABCA9-201ENST00000340001 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
ABCA9-201ENST00000340001 IPO8O15397 1037 aaKnown RBP9□□□□□ -0.97
ABCA9-201ENST00000340001 CHMP4BQ9H444 224 aaKnown RBP9□□□□□ -0.97
ABCA9-201ENST00000340001 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
ABCA9-201ENST00000340001 BICDL1Q6ZP65 573 aa8.99□□□□□ -0.97
ABCA9-201ENST00000340001 GPATCH3Q96I76 525 aa8.99□□□□□ -0.97
ABCA9-201ENST00000340001 ZNF644Q9H582 1327 aaPredicted RBP8.99□□□□□ -0.97
ABCA9-201ENST00000340001 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
ABCA9-201ENST00000340001 MINK1Q8N4C8 1332 aaPredicted RBP8.98□□□□□ -0.97
ABCA9-201ENST00000340001 SKIDA1Q1XH10 827 aa8.98□□□□□ -0.97
ABCA9-201ENST00000340001 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
ABCA9-201ENST00000340001 ANKRD45Q5TZF3 282 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 PMFBP1Q8TBY8 1022 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 TEFQ10587 303 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 EFCAB2Q5VUJ9 269 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
ABCA9-201ENST00000340001 KIF15Q9NS87 1388 aa8.96□□□□□ -0.97
ABCA9-201ENST00000340001 MYBBP1AQ9BQG0 1328 aaKnown RBP8.96□□□□□ -0.97
ABCA9-201ENST00000340001 WDR78Q5VTH9 848 aa8.96□□□□□ -0.97
ABCA9-201ENST00000340001 GOLGA6L3A6NEY3 463 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 EIF3AQ14152 1382 aaKnown RBP8.96□□□□□ -0.98
ABCA9-201ENST00000340001 USP47Q96K76 1375 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 APAF1O14727 1248 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 NLRP13Q86W25 1043 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 DDX54Q8TDD1 881 aaKnown RBP8.96□□□□□ -0.98
ABCA9-201ENST00000340001 H3BQV1 296 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 PDE4AP27815 886 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 RRP1P56182 461 aaKnown RBP8.96□□□□□ -0.98
ABCA9-201ENST00000340001 IFFO2Q5TF58 517 aa8.96□□□□□ -0.98
ABCA9-201ENST00000340001 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
ABCA9-201ENST00000340001 DHX37Q8IY37 1157 aaKnown RBP8.95□□□□□ -0.98
ABCA9-201ENST00000340001 E9PSI1 815 aa8.95□□□□□ -0.98
ABCA9-201ENST00000340001 PRKRIP1Q9H875 184 aaPredicted RBP8.95□□□□□ -0.98
ABCA9-201ENST00000340001 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
ABCA9-201ENST00000340001 PDS5BQ9NTI5 1447 aa8.95□□□□□ -0.98
ABCA9-201ENST00000340001 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
ABCA9-201ENST00000340001 TMEM87AQ8NBN3 555 aa8.95□□□□□ -0.98
ABCA9-201ENST00000340001 NEUROD6Q96NK8 337 aa8.94□□□□□ -0.98
ABCA9-201ENST00000340001 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
ABCA9-201ENST00000340001 XPCQ01831 940 aaPredicted RBP8.94□□□□□ -0.98
ABCA9-201ENST00000340001 CT47A1Q5JQC4 288 aaPredicted RBP8.94□□□□□ -0.98
ABCA9-201ENST00000340001 JPH4Q96JJ6 628 aa8.94□□□□□ -0.98
ABCA9-201ENST00000340001 ODF2Q5BJF6 829 aa8.94□□□□□ -0.98
ABCA9-201ENST00000340001 C9orf78Q9NZ63 289 aaPredicted RBP8.94□□□□□ -0.98
ABCA9-201ENST00000340001 HMOX1P09601 288 aa8.93□□□□□ -0.98
ABCA9-201ENST00000340001 SYNE3Q6ZMZ3 975 aa8.93□□□□□ -0.98
ABCA9-201ENST00000340001 SPINK5Q9NQ38 1064 aaPredicted RBP8.93□□□□□ -0.98
ABCA9-201ENST00000340001 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
ABCA9-201ENST00000340001 WWC2Q6AWC2 1192 aa8.93□□□□□ -0.98
ABCA9-201ENST00000340001 NAP1L1P55209 391 aaKnown RBP8.93□□□□□ -0.98
ABCA9-201ENST00000340001 ADAMTS2O95450 1211 aa8.92□□□□□ -0.98
ABCA9-201ENST00000340001 TPM3P06753 285 aa8.92□□□□□ -0.98
ABCA9-201ENST00000340001 FAM184AQ8NB25 1140 aa8.92□□□□□ -0.98
ABCA9-201ENST00000340001 TPM4P67936 248 aa8.92□□□□□ -0.98
ABCA9-201ENST00000340001 ZSCAN29Q8IWY8 852 aaPredicted RBP8.92□□□□□ -0.98
ABCA9-201ENST00000340001 TRMT1LQ7Z2T5 733 aaKnown RBP8.91□□□□□ -0.98
ABCA9-201ENST00000340001 ATP2B1P20020 1258 aa8.91□□□□□ -0.98
ABCA9-201ENST00000340001 PSMD1Q99460 953 aa8.91□□□□□ -0.98
ABCA9-201ENST00000340001 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
ABCA9-201ENST00000340001 FANCD2Q9BXW9 1451 aa8.9□□□□□ -0.98
ABCA9-201ENST00000340001 ESCO1Q5FWF5 840 aa8.9□□□□□ -0.98
ABCA9-201ENST00000340001 RRP12Q5JTH9 1297 aaKnown RBP8.9□□□□□ -0.98
ABCA9-201ENST00000340001 PANK1Q8TE04 598 aa8.9□□□□□ -0.98
ABCA9-201ENST00000340001 TMEM132EQ6IEE7 984 aa8.9□□□□□ -0.98
ABCA9-201ENST00000340001 PIBF1Q8WXW3 757 aa8.9□□□□□ -0.98
ABCA9-201ENST00000340001 ATAD2BQ9ULI0 1458 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 CADPSQ9ULU8 1353 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 TTLL5Q6EMB2 1281 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 FAM161AQ3B820 660 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 CABP2Q9NPB3 220 aa8.89□□□□□ -0.99
ABCA9-201ENST00000340001 MPHOSPH10O00566 681 aaKnown RBP8.88□□□□□ -0.99
ABCA9-201ENST00000340001 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
ABCA9-201ENST00000340001 CCDC85AQ96PX6 553 aaPredicted RBP8.88□□□□□ -0.99
ABCA9-201ENST00000340001 MATR3P43243 847 aaKnown RBP eCLIP8.88□□□□□ -0.99
ABCA9-201ENST00000340001 KIF16BQ96L93 1317 aa8.88□□□□□ -0.99
ABCA9-201ENST00000340001 PHLDB1Q86UU1 1377 aa8.88□□□□□ -0.99
ABCA9-201ENST00000340001 RIPK4P57078 832 aa8.88□□□□□ -0.99
ABCA9-201ENST00000340001 NEXNQ0ZGT2 675 aa8.88□□□□□ -0.99
ABCA9-201ENST00000340001 KIF7Q2M1P5 1343 aa8.88□□□□□ -0.99
ABCA9-201ENST00000340001 CENPQQ7L2Z9 268 aaPredicted RBP8.88□□□□□ -0.99
ABCA9-201ENST00000340001 COG3Q96JB2 828 aa8.88□□□□□ -0.99
ABCA9-201ENST00000340001 ZHX3Q9H4I2 956 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms