RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 IDI1Q13907 227 aa23.62■■□□□ 1.37
ATAD3A-201ENST00000339113 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
ATAD3A-201ENST00000339113 AGLP35573 1532 aa23.62■■□□□ 1.37
ATAD3A-201ENST00000339113 DISP3Q9P2K9 1392 aa23.61■■□□□ 1.37
ATAD3A-201ENST00000339113 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
ATAD3A-201ENST00000339113 MLECQ14165 292 aa23.6■■□□□ 1.37
ATAD3A-201ENST00000339113 PIK3C2BO00750 1634 aa23.6■■□□□ 1.37
ATAD3A-201ENST00000339113 NRXN1Q9ULB1 1477 aa23.59■■□□□ 1.37
ATAD3A-201ENST00000339113 CNGB1Q14028 1251 aaPredicted RBP23.59■■□□□ 1.37
ATAD3A-201ENST00000339113 SUPT16HQ9Y5B9 1047 aaKnown RBP23.59■■□□□ 1.37
ATAD3A-201ENST00000339113 IQGAP1P46940 1657 aa23.58■■□□□ 1.37
ATAD3A-201ENST00000339113 SCAF11Q99590 1463 aaKnown RBP23.58■■□□□ 1.37
ATAD3A-201ENST00000339113 ARHGEF40Q8TER5 1519 aa23.56■■□□□ 1.36
ATAD3A-201ENST00000339113 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
ATAD3A-201ENST00000339113 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
ATAD3A-201ENST00000339113 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
ATAD3A-201ENST00000339113 RPGRIP1LQ68CZ1 1315 aa23.55■■□□□ 1.36
ATAD3A-201ENST00000339113 TMF1P82094 1093 aa23.54■■□□□ 1.36
ATAD3A-201ENST00000339113 PPP6R1Q9UPN7 881 aa23.54■■□□□ 1.36
ATAD3A-201ENST00000339113 PPLO60437 1756 aa23.54■■□□□ 1.36
ATAD3A-201ENST00000339113 PREX1Q8TCU6 1659 aa23.53■■□□□ 1.36
ATAD3A-201ENST00000339113 PIK3C2GO75747 1445 aa23.51■■□□□ 1.35
ATAD3A-201ENST00000339113 C14orf93Q9H972 538 aaKnown RBP23.5■■□□□ 1.35
ATAD3A-201ENST00000339113 CLTCQ00610 1675 aaKnown RBP23.49■■□□□ 1.35
ATAD3A-201ENST00000339113 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
ATAD3A-201ENST00000339113 MRS2Q9HD23 443 aa23.48■■□□□ 1.35
ATAD3A-201ENST00000339113 NEXMIFQ5QGS0 1516 aa23.47■■□□□ 1.35
ATAD3A-201ENST00000339113 VGFO15240 615 aaPredicted RBP23.46■■□□□ 1.35
ATAD3A-201ENST00000339113 PER1O15534 1290 aaPredicted RBP23.46■■□□□ 1.35
ATAD3A-201ENST00000339113 TMEM132EQ6IEE7 984 aa23.46■■□□□ 1.35
ATAD3A-201ENST00000339113 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.34
ATAD3A-201ENST00000339113 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
ATAD3A-201ENST00000339113 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
ATAD3A-201ENST00000339113 PANK3Q9H999 370 aa23.43■■□□□ 1.34
ATAD3A-201ENST00000339113 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
ATAD3A-201ENST00000339113 ADGRB1O14514 1584 aa23.42■■□□□ 1.34
ATAD3A-201ENST00000339113 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
ATAD3A-201ENST00000339113 MYO5BQ9ULV0 1848 aa23.42■■□□□ 1.34
ATAD3A-201ENST00000339113 TRAK1Q9UPV9 953 aa23.42■■□□□ 1.34
ATAD3A-201ENST00000339113 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
ATAD3A-201ENST00000339113 ZMYM3Q14202 1370 aa23.39■■□□□ 1.34
ATAD3A-201ENST00000339113 SPATA31D1Q6ZQQ2 1576 aa23.38■■□□□ 1.33
ATAD3A-201ENST00000339113 ESF1Q9H501 851 aaKnown RBP23.38■■□□□ 1.33
ATAD3A-201ENST00000339113 ZFYVE9O95405 1425 aa23.38■■□□□ 1.33
ATAD3A-201ENST00000339113 HNRNPUQ00839 825 aaKnown RBP eCLIP23.37■■□□□ 1.33
ATAD3A-201ENST00000339113 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
ATAD3A-201ENST00000339113 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
ATAD3A-201ENST00000339113 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
ATAD3A-201ENST00000339113 RALBP1Q15311 655 aa23.34■■□□□ 1.33
ATAD3A-201ENST00000339113 MYO3AQ8NEV4 1616 aa23.32■■□□□ 1.32
ATAD3A-201ENST00000339113 CC2D1BQ5T0F9 858 aaKnown RBP23.32■■□□□ 1.32
ATAD3A-201ENST00000339113 A2ML1A8K2U0 1454 aa23.31■■□□□ 1.32
ATAD3A-201ENST00000339113 KTN1Q86UP2 1357 aaKnown RBP23.31■■□□□ 1.32
ATAD3A-201ENST00000339113 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
ATAD3A-201ENST00000339113 MYBBP1AQ9BQG0 1328 aaKnown RBP23.31■■□□□ 1.32
ATAD3A-201ENST00000339113 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
ATAD3A-201ENST00000339113 TSHZ2Q9NRE2 1034 aa23.3■■□□□ 1.32
ATAD3A-201ENST00000339113 SLC24A1O60721 1099 aa23.29■■□□□ 1.32
ATAD3A-201ENST00000339113 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
ATAD3A-201ENST00000339113 ASXL1Q8IXJ9 1541 aa23.27■■□□□ 1.32
ATAD3A-201ENST00000339113 MYOM1P52179 1685 aa23.27■■□□□ 1.32
ATAD3A-201ENST00000339113 PNISRQ8TF01 805 aaKnown RBP23.26■■□□□ 1.31
ATAD3A-201ENST00000339113 STK26Q9P289 416 aa23.26■■□□□ 1.31
ATAD3A-201ENST00000339113 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
ATAD3A-201ENST00000339113 KNSTRNQ9Y448 316 aa23.24■■□□□ 1.31
ATAD3A-201ENST00000339113 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
ATAD3A-201ENST00000339113 RIMS2Q9UQ26 1411 aa23.24■■□□□ 1.31
ATAD3A-201ENST00000339113 QRICH2Q9H0J4 1663 aa23.23■■□□□ 1.31
ATAD3A-201ENST00000339113 CEBPAP49715 358 aaPredicted RBP23.22■■□□□ 1.31
ATAD3A-201ENST00000339113 AMER1Q5JTC6 1135 aaPredicted RBP23.22■■□□□ 1.31
ATAD3A-201ENST00000339113 TNRQ92752 1358 aa23.22■■□□□ 1.31
ATAD3A-201ENST00000339113 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
ATAD3A-201ENST00000339113 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
ATAD3A-201ENST00000339113 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
ATAD3A-201ENST00000339113 ALKQ9UM73 1620 aa23.2■■□□□ 1.31
ATAD3A-201ENST00000339113 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
ATAD3A-201ENST00000339113 CARD14Q9BXL6 1004 aa23.19■■□□□ 1.3
ATAD3A-201ENST00000339113 YTHDC2Q9H6S0 1430 aaKnown RBP23.17■■□□□ 1.3
ATAD3A-201ENST00000339113 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
ATAD3A-201ENST00000339113 PTPRMP28827 1452 aa23.15■■□□□ 1.3
ATAD3A-201ENST00000339113 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.3
ATAD3A-201ENST00000339113 PRAM1Q96QH2 718 aa23.14■■□□□ 1.3
ATAD3A-201ENST00000339113 TULP4Q9NRJ4 1543 aa23.14■■□□□ 1.29
ATAD3A-201ENST00000339113 ZBED9Q6R2W3 1325 aa23.14■■□□□ 1.29
ATAD3A-201ENST00000339113 SENP3-EIF4A1A0A087X0R7 540 aa23.14■■□□□ 1.29
ATAD3A-201ENST00000339113 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
ATAD3A-201ENST00000339113 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
ATAD3A-201ENST00000339113 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
ATAD3A-201ENST00000339113 CABP2Q9NPB3 220 aa23.11■■□□□ 1.29
ATAD3A-201ENST00000339113 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
ATAD3A-201ENST00000339113 POGKQ9P215 609 aa23.1■■□□□ 1.29
ATAD3A-201ENST00000339113 NPC1L1Q9UHC9 1359 aa23.1■■□□□ 1.29
ATAD3A-201ENST00000339113 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
ATAD3A-201ENST00000339113 TMEM2Q9UHN6 1383 aa23.09■■□□□ 1.29
ATAD3A-201ENST00000339113 ANP32EQ9BTT0 268 aa23.08■■□□□ 1.29
ATAD3A-201ENST00000339113 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.29
ATAD3A-201ENST00000339113 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.29
ATAD3A-201ENST00000339113 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.28
ATAD3A-201ENST00000339113 SETD1AO15047 1707 aaKnown RBP23.07■■□□□ 1.28
ATAD3A-201ENST00000339113 METP08581 1390 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms